RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
LINC00578-204ENST00000446548 DNMT1P26358 1616 aaKnown RBP13.08□□□□□ -0.32
LINC00578-204ENST00000446548 GCC2Q8IWJ2 1684 aa13.08□□□□□ -0.32
LINC00578-204ENST00000446548 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
LINC00578-204ENST00000446548 GPATCH8Q9UKJ3 1502 aaKnown RBP13.07□□□□□ -0.32
LINC00578-204ENST00000446548 DHX57Q6P158 1386 aaKnown RBP13.07□□□□□ -0.32
LINC00578-204ENST00000446548 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
LINC00578-204ENST00000446548 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
LINC00578-204ENST00000446548 TMEM106CQ9BVX2 250 aa13.06□□□□□ -0.32
LINC00578-204ENST00000446548 CROCC2H7BZ55 1655 aa13.05□□□□□ -0.32
LINC00578-204ENST00000446548 KDM5BQ9UGL1 1544 aa13.05□□□□□ -0.32
LINC00578-204ENST00000446548 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
LINC00578-204ENST00000446548 PREX2Q70Z35 1606 aa13.05□□□□□ -0.32
LINC00578-204ENST00000446548 CDC42BPBQ9Y5S2 1711 aa13.05□□□□□ -0.32
LINC00578-204ENST00000446548 RIOK3O14730 519 aaKnown RBP13.04□□□□□ -0.32
LINC00578-204ENST00000446548 PDAP1Q13442 181 aaKnown RBP13.04□□□□□ -0.32
LINC00578-204ENST00000446548 TAOK2Q9UL54 1235 aa13.04□□□□□ -0.32
LINC00578-204ENST00000446548 TTC37Q6PGP7 1564 aa13.03□□□□□ -0.32
LINC00578-204ENST00000446548 CAMSAP2Q08AD1 1489 aa13.03□□□□□ -0.32
LINC00578-204ENST00000446548 PSEN1P49768 467 aa13.02□□□□□ -0.33
LINC00578-204ENST00000446548 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
LINC00578-204ENST00000446548 HFM1A2PYH4 1435 aa13.02□□□□□ -0.33
LINC00578-204ENST00000446548 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.33
LINC00578-204ENST00000446548 PLEKHD1A6NEE1 506 aa13.01□□□□□ -0.33
LINC00578-204ENST00000446548 AKNAQ7Z591 1439 aa13.01□□□□□ -0.33
LINC00578-204ENST00000446548 MYO5CQ9NQX4 1742 aa13.01□□□□□ -0.33
LINC00578-204ENST00000446548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13□□□□□ -0.33
LINC00578-204ENST00000446548 DAPK1P53355 1430 aa13□□□□□ -0.33
LINC00578-204ENST00000446548 NAIPQ13075 1403 aa13□□□□□ -0.33
LINC00578-204ENST00000446548 MAPKBP1O60336 1514 aa12.99□□□□□ -0.33
LINC00578-204ENST00000446548 ABCC5O15440 1437 aa12.99□□□□□ -0.33
LINC00578-204ENST00000446548 SLC39A7Q92504 469 aa12.99□□□□□ -0.33
LINC00578-204ENST00000446548 KDM6BO15054 1643 aa12.99□□□□□ -0.33
LINC00578-204ENST00000446548 ZNF644Q9H582 1327 aaPredicted RBP12.98□□□□□ -0.33
LINC00578-204ENST00000446548 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
LINC00578-204ENST00000446548 RNF25Q96BH1 459 aaPredicted RBP12.98□□□□□ -0.33
LINC00578-204ENST00000446548 TRIM35Q9UPQ4 493 aa12.98□□□□□ -0.33
LINC00578-204ENST00000446548 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
LINC00578-204ENST00000446548 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
LINC00578-204ENST00000446548 GOLGA2Q08379 1002 aa12.96□□□□□ -0.33
LINC00578-204ENST00000446548 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
LINC00578-204ENST00000446548 ARHGEF5Q12774 1597 aa12.95□□□□□ -0.34
LINC00578-204ENST00000446548 C7P10643 843 aa12.95□□□□□ -0.34
LINC00578-204ENST00000446548 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
LINC00578-204ENST00000446548 RGL2O15211 777 aa12.94□□□□□ -0.34
LINC00578-204ENST00000446548 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
LINC00578-204ENST00000446548 ROCK1Q13464 1354 aa12.94□□□□□ -0.34
LINC00578-204ENST00000446548 ADGRL2O95490 1459 aa12.93□□□□□ -0.34
LINC00578-204ENST00000446548 SHANK2Q9UPX8 1470 aa12.92□□□□□ -0.34
LINC00578-204ENST00000446548 METRNQ9UJH8 293 aa12.92□□□□□ -0.34
LINC00578-204ENST00000446548 WDR7Q9Y4E6 1490 aa12.91□□□□□ -0.34
LINC00578-204ENST00000446548 IER5LQ5T953 404 aa12.91□□□□□ -0.34
LINC00578-204ENST00000446548 ABCA9Q8IUA7 1624 aa12.91□□□□□ -0.34
LINC00578-204ENST00000446548 ARHGAP5Q13017 1502 aa12.9□□□□□ -0.34
LINC00578-204ENST00000446548 CHIC2Q9UKJ5 165 aa12.9□□□□□ -0.34
LINC00578-204ENST00000446548 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
LINC00578-204ENST00000446548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.89□□□□□ -0.35
LINC00578-204ENST00000446548 ZFP91Q96JP5 570 aaPredicted RBP12.89□□□□□ -0.35
LINC00578-204ENST00000446548 RRP7BPQ9NSQ0 103 aa12.89□□□□□ -0.35
LINC00578-204ENST00000446548 MAST1Q9Y2H9 1570 aa12.89□□□□□ -0.35
LINC00578-204ENST00000446548 ARAP3Q8WWN8 1544 aa12.88□□□□□ -0.35
LINC00578-204ENST00000446548 SYCP2Q9BX26 1530 aa12.88□□□□□ -0.35
LINC00578-204ENST00000446548 RIMBP3CA6NJZ7 1639 aa12.88□□□□□ -0.35
LINC00578-204ENST00000446548 RIMBP3BA6NNM3 1639 aa12.88□□□□□ -0.35
LINC00578-204ENST00000446548 RIMBP3Q9UFD9 1639 aa12.88□□□□□ -0.35
LINC00578-204ENST00000446548 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
LINC00578-204ENST00000446548 SEC24BO95487 1268 aa12.87□□□□□ -0.35
LINC00578-204ENST00000446548 ZNF777Q9ULD5 760 aaPredicted RBP12.87□□□□□ -0.35
LINC00578-204ENST00000446548 PLCH2O75038 1416 aa12.87□□□□□ -0.35
LINC00578-204ENST00000446548 NCOA1Q15788 1441 aa12.87□□□□□ -0.35
LINC00578-204ENST00000446548 DENND4BO75064 1496 aaPredicted RBP12.86□□□□□ -0.35
LINC00578-204ENST00000446548 CCDC141Q6ZP82 1450 aa12.86□□□□□ -0.35
LINC00578-204ENST00000446548 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
LINC00578-204ENST00000446548 ABCC1P33527 1531 aa12.86□□□□□ -0.35
LINC00578-204ENST00000446548 ASXL2Q76L83 1435 aa12.86□□□□□ -0.35
LINC00578-204ENST00000446548 C9orf84Q5VXU9 1444 aa12.85□□□□□ -0.35
LINC00578-204ENST00000446548 ARHGEF12Q9NZN5 1544 aa12.84□□□□□ -0.35
LINC00578-204ENST00000446548 PLEKHH2Q8IVE3 1493 aa12.84□□□□□ -0.35
LINC00578-204ENST00000446548 KIAA1107Q9UPP5 1409 aa12.83□□□□□ -0.36
LINC00578-204ENST00000446548 STK25O00506 426 aa12.83□□□□□ -0.36
LINC00578-204ENST00000446548 KCNH8Q96L42 1107 aa12.83□□□□□ -0.36
LINC00578-204ENST00000446548 PLXNC1O60486 1568 aa12.82□□□□□ -0.36
LINC00578-204ENST00000446548 BCL11BQ9C0K0 894 aaPredicted RBP12.82□□□□□ -0.36
LINC00578-204ENST00000446548 HNRNPMP52272 730 aaKnown RBP eCLIP12.81□□□□□ -0.36
LINC00578-204ENST00000446548 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
LINC00578-204ENST00000446548 STK24Q9Y6E0 443 aa12.81□□□□□ -0.36
LINC00578-204ENST00000446548 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
LINC00578-204ENST00000446548 PLCG2P16885 1265 aa12.8□□□□□ -0.36
LINC00578-204ENST00000446548 LHX8Q68G74 356 aa12.79□□□□□ -0.36
LINC00578-204ENST00000446548 PZPP20742 1482 aa12.78□□□□□ -0.36
LINC00578-204ENST00000446548 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
LINC00578-204ENST00000446548 OCEL1Q9H607 264 aa12.77□□□□□ -0.37
LINC00578-204ENST00000446548 ANKRD50Q9ULJ7 1429 aa12.77□□□□□ -0.37
LINC00578-204ENST00000446548 IRX5P78411 483 aaPredicted RBP12.76□□□□□ -0.37
LINC00578-204ENST00000446548 RSPH4AQ5TD94 716 aa12.76□□□□□ -0.37
LINC00578-204ENST00000446548 EFCAB2Q5VUJ9 269 aa12.76□□□□□ -0.37
LINC00578-204ENST00000446548 SIN3AQ96ST3 1273 aa12.76□□□□□ -0.37
LINC00578-204ENST00000446548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC00578-204ENST00000446548 TRAPPC8Q9Y2L5 1435 aa12.76□□□□□ -0.37
LINC00578-204ENST00000446548 FANCAO15360 1455 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms