RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 MAST1Q9Y2H9 1570 aa25.62■■□□□ 1.69
PMPCB-204ENST00000444457 ZBED9Q6R2W3 1325 aa25.62■■□□□ 1.69
PMPCB-204ENST00000444457 ABCC2Q92887 1545 aa25.62■■□□□ 1.69
PMPCB-204ENST00000444457 FAM135AQ9P2D6 1515 aa25.62■■□□□ 1.69
PMPCB-204ENST00000444457 ARHGAP5Q13017 1502 aa25.62■■□□□ 1.69
PMPCB-204ENST00000444457 MRS2Q9HD23 443 aa25.61■■□□□ 1.69
PMPCB-204ENST00000444457 ERCC6L2Q5T890 1561 aa25.61■■□□□ 1.69
PMPCB-204ENST00000444457 MYO5CQ9NQX4 1742 aa25.6■■□□□ 1.69
PMPCB-204ENST00000444457 DHX29Q7Z478 1369 aaKnown RBP25.58■■□□□ 1.69
PMPCB-204ENST00000444457 ARID4BQ4LE39 1312 aaPredicted RBP25.58■■□□□ 1.69
PMPCB-204ENST00000444457 UNC13BO14795 1591 aa25.56■■□□□ 1.68
PMPCB-204ENST00000444457 FAM9BQ8IZU0 186 aa25.56■■□□□ 1.68
PMPCB-204ENST00000444457 IPO9Q96P70 1041 aaKnown RBP25.55■■□□□ 1.68
PMPCB-204ENST00000444457 PLXNC1O60486 1568 aa25.54■■□□□ 1.68
PMPCB-204ENST00000444457 CARD11Q9BXL7 1154 aa25.53■■□□□ 1.68
PMPCB-204ENST00000444457 RTL5Q5HYW3 569 aaPredicted RBP25.52■■□□□ 1.68
PMPCB-204ENST00000444457 PLEKHH2Q8IVE3 1493 aa25.52■■□□□ 1.68
PMPCB-204ENST00000444457 ANP32AP39687 249 aaKnown RBP25.52■■□□□ 1.68
PMPCB-204ENST00000444457 POLR3GLQ9BT43 218 aa25.49■■□□□ 1.67
PMPCB-204ENST00000444457 KDM2AQ9Y2K7 1162 aa25.49■■□□□ 1.67
PMPCB-204ENST00000444457 ROCK2O75116 1388 aaKnown RBP25.49■■□□□ 1.67
PMPCB-204ENST00000444457 DCAF11Q8TEB1 546 aa25.49■■□□□ 1.67
PMPCB-204ENST00000444457 SALL2Q9Y467 1007 aaPredicted RBP25.48■■□□□ 1.67
PMPCB-204ENST00000444457 IQGAP3Q86VI3 1631 aa25.47■■□□□ 1.67
PMPCB-204ENST00000444457 ZCCHC11Q5TAX3 1644 aaKnown RBP25.47■■□□□ 1.67
PMPCB-204ENST00000444457 CCDC144AA2RUR9 1427 aa25.46■■□□□ 1.67
PMPCB-204ENST00000444457 TRPM1Q7Z4N2 1603 aa25.45■■□□□ 1.66
PMPCB-204ENST00000444457 CLASP1Q7Z460 1538 aa25.44■■□□□ 1.66
PMPCB-204ENST00000444457 ZBTB47Q9UFB7 747 aaPredicted RBP25.44■■□□□ 1.66
PMPCB-204ENST00000444457 SMG6Q86US8 1419 aaKnown RBP25.43■■□□□ 1.66
PMPCB-204ENST00000444457 DUOX2Q9NRD8 1548 aa25.43■■□□□ 1.66
PMPCB-204ENST00000444457 PLA2R1Q13018 1463 aa25.42■■□□□ 1.66
PMPCB-204ENST00000444457 PRAG1Q86YV5 1406 aa25.41■■□□□ 1.66
PMPCB-204ENST00000444457 ST20-MTHFSA0A0A6YYL1 179 aa25.41■■□□□ 1.66
PMPCB-204ENST00000444457 UHRF1BP1LA0JNW5 1464 aa25.41■■□□□ 1.66
PMPCB-204ENST00000444457 RNF123Q5XPI4 1314 aa25.41■■□□□ 1.66
PMPCB-204ENST00000444457 PLCH2O75038 1416 aa25.4■■□□□ 1.66
PMPCB-204ENST00000444457 E9PCH4 1651 aa25.4■■□□□ 1.66
PMPCB-204ENST00000444457 MAGI2Q86UL8 1455 aa25.39■■□□□ 1.66
PMPCB-204ENST00000444457 IL27Q8NEV9 243 aa25.38■■□□□ 1.65
PMPCB-204ENST00000444457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.38■■□□□ 1.652e-6■■□□□ 13.3
PMPCB-204ENST00000444457 ERBINQ96RT1 1412 aa25.38■■□□□ 1.65
PMPCB-204ENST00000444457 ABCC1P33527 1531 aa25.37■■□□□ 1.65
PMPCB-204ENST00000444457 CNGB1Q14028 1251 aaPredicted RBP25.36■■□□□ 1.65
PMPCB-204ENST00000444457 A2MP01023 1474 aa25.36■■□□□ 1.65
PMPCB-204ENST00000444457 OSCARQ8IYS5 282 aa25.34■■□□□ 1.65
PMPCB-204ENST00000444457 CCDC136Q96JN2 1154 aa25.34■■□□□ 1.65
PMPCB-204ENST00000444457 LAMC1P11047 1609 aa25.33■■□□□ 1.65
PMPCB-204ENST00000444457 ATP10AO60312 1499 aa25.32■■□□□ 1.64
PMPCB-204ENST00000444457 EFCAB2Q5VUJ9 269 aa25.32■■□□□ 1.64
PMPCB-204ENST00000444457 RGL3Q3MIN7 710 aa25.31■■□□□ 1.64
PMPCB-204ENST00000444457 GPRASP1Q5JY77 1395 aa25.31■■□□□ 1.64
PMPCB-204ENST00000444457 NUDCQ9Y266 331 aa25.3■■□□□ 1.64
PMPCB-204ENST00000444457 EIF2AK4Q9P2K8 1649 aaKnown RBP25.29■■□□□ 1.64
PMPCB-204ENST00000444457 TRAPPC8Q9Y2L5 1435 aa25.28■■□□□ 1.64
PMPCB-204ENST00000444457 PRDM15P57071 1507 aaPredicted RBP25.27■■□□□ 1.64
PMPCB-204ENST00000444457 KTN1Q86UP2 1357 aaKnown RBP25.27■■□□□ 1.64
PMPCB-204ENST00000444457 USP35Q9P2H5 1018 aa25.26■■□□□ 1.63
PMPCB-204ENST00000444457 NBPF1Q3BBV0 1214 aa25.26■■□□□ 1.63
PMPCB-204ENST00000444457 ARAP3Q8WWN8 1544 aa25.25■■□□□ 1.63
PMPCB-204ENST00000444457 PNISRQ8TF01 805 aaKnown RBP25.25■■□□□ 1.63
PMPCB-204ENST00000444457 TMC1Q8TDI8 760 aa25.24■■□□□ 1.63
PMPCB-204ENST00000444457 RALBP1Q15311 655 aa25.22■■□□□ 1.63
PMPCB-204ENST00000444457 MYBBP1AQ9BQG0 1328 aaKnown RBP25.22■■□□□ 1.63
PMPCB-204ENST00000444457 BRD4O60885 1362 aaPredicted RBP25.21■■□□□ 1.63
PMPCB-204ENST00000444457 COL17A1Q9UMD9 1497 aaPredicted RBP25.21■■□□□ 1.63
PMPCB-204ENST00000444457 WASHC2CQ9Y4E1 1318 aa25.21■■□□□ 1.63
PMPCB-204ENST00000444457 ZFYVE16Q7Z3T8 1539 aa25.21■■□□□ 1.63
PMPCB-204ENST00000444457 RTN4Q9NQC3 1192 aaKnown RBP25.19■■□□□ 1.62
PMPCB-204ENST00000444457 RTEL1-TNFRSF6BF6WH68 1400 aa25.19■■□□□ 1.62
PMPCB-204ENST00000444457 LRPPRCP42704 1394 aaKnown RBP25.19■■□□□ 1.62
PMPCB-204ENST00000444457 RNF17Q9BXT8 1623 aaKnown RBP25.19■■□□□ 1.62
PMPCB-204ENST00000444457 SPAG9O60271 1321 aaKnown RBP25.17■■□□□ 1.62
PMPCB-204ENST00000444457 DEPDC5O75140 1603 aa25.15■■□□□ 1.62
PMPCB-204ENST00000444457 NEFMP07197 916 aa25.15■■□□□ 1.62
PMPCB-204ENST00000444457 TESK2Q96S53 571 aa25.15■■□□□ 1.62
PMPCB-204ENST00000444457 PARD3Q8TEW0 1356 aa25.14■■□□□ 1.61
PMPCB-204ENST00000444457 WDR7Q9Y4E6 1490 aa25.14■■□□□ 1.61
PMPCB-204ENST00000444457 DISP3Q9P2K9 1392 aa25.13■■□□□ 1.61
PMPCB-204ENST00000444457 ABCA9Q8IUA7 1624 aa25.13■■□□□ 1.61
PMPCB-204ENST00000444457 TRPM2O94759 1503 aa25.13■■□□□ 1.61
PMPCB-204ENST00000444457 SPHKAPQ2M3C7 1700 aa25.13■■□□□ 1.61
PMPCB-204ENST00000444457 AFAP1Q8N556 730 aa25.12■■□□□ 1.61
PMPCB-204ENST00000444457 CEP152O94986 1710 aa25.12■■□□□ 1.61
PMPCB-204ENST00000444457 MADDQ8WXG6 1647 aa25.11■■□□□ 1.61
PMPCB-204ENST00000444457 PER1O15534 1290 aaPredicted RBP25.1■■□□□ 1.61
PMPCB-204ENST00000444457 INO80Q9ULG1 1556 aaPredicted RBP25.1■■□□□ 1.61
PMPCB-204ENST00000444457 TCERG1O14776 1098 aaKnown RBP25.1■■□□□ 1.61
PMPCB-204ENST00000444457 UBE2Q2Q8WVN8 375 aa25.1■■□□□ 1.61
PMPCB-204ENST00000444457 TET3O43151 1660 aa25.09■■□□□ 1.61
PMPCB-204ENST00000444457 ATP7AQ04656 1500 aa25.09■■□□□ 1.61
PMPCB-204ENST00000444457 PPM1GO15355 546 aaPredicted RBP25.08■■□□□ 1.61
PMPCB-204ENST00000444457 NLRP13Q86W25 1043 aa25.08■■□□□ 1.61
PMPCB-204ENST00000444457 FANCAO15360 1455 aa25.08■■□□□ 1.61
PMPCB-204ENST00000444457 LAS1LQ9Y4W2 734 aaKnown RBP25.08■■□□□ 1.6
PMPCB-204ENST00000444457 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.07■■□□□ 1.6
PMPCB-204ENST00000444457 PTPRTO14522 1441 aa25.06■■□□□ 1.6
PMPCB-204ENST00000444457 CLTCL1P53675 1640 aa25.06■■□□□ 1.6
PMPCB-204ENST00000444457 IQGAP1P46940 1657 aa25.06■■□□□ 1.6
PMPCB-204ENST00000444457 SENP3-EIF4A1A0A087X0R7 540 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms