RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
SF1-210ENST00000443908 RTEL1-TNFRSF6BF6WH68 1400 aa20.1■□□□□ 0.81
SF1-210ENST00000443908 ANKRD30AQ9BXX3 1397 aa20.1■□□□□ 0.81
SF1-210ENST00000443908 AGLP35573 1532 aa20.1■□□□□ 0.81
SF1-210ENST00000443908 CNTLNQ9NXG0 1405 aa20.09■□□□□ 0.81
SF1-210ENST00000443908 ZMYM3Q14202 1370 aa20.08■□□□□ 0.81
SF1-210ENST00000443908 REREQ9P2R6 1566 aa20.08■□□□□ 0.81
SF1-210ENST00000443908 INO80Q9ULG1 1556 aaPredicted RBP20.08■□□□□ 0.81
SF1-210ENST00000443908 HRCP23327 699 aa20.08■□□□□ 0.81
SF1-210ENST00000443908 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
SF1-210ENST00000443908 STRCQ7RTU9 1775 aa20.06■□□□□ 0.8
SF1-210ENST00000443908 PTPRTO14522 1441 aa20.06■□□□□ 0.8
SF1-210ENST00000443908 RAB3GAP2Q9H2M9 1393 aa20.06■□□□□ 0.8
SF1-210ENST00000443908 C3P01024 1663 aa20.05■□□□□ 0.8
SF1-210ENST00000443908 DISP3Q9P2K9 1392 aa20.05■□□□□ 0.8
SF1-210ENST00000443908 NCKAP5LQ9HCH0 1330 aa20.04■□□□□ 0.8
SF1-210ENST00000443908 KIDINS220Q9ULH0 1771 aa20.04■□□□□ 0.8
SF1-210ENST00000443908 ATP7AQ04656 1500 aa20.04■□□□□ 0.8
SF1-210ENST00000443908 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
SF1-210ENST00000443908 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.8
SF1-210ENST00000443908 KIF15Q9NS87 1388 aa20.02■□□□□ 0.8
SF1-210ENST00000443908 DUOX2Q9NRD8 1548 aa20■□□□□ 0.79
SF1-210ENST00000443908 NPATQ14207 1427 aa19.98■□□□□ 0.79
SF1-210ENST00000443908 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
SF1-210ENST00000443908 A2MP01023 1474 aa19.98■□□□□ 0.79
SF1-210ENST00000443908 PPP6R1Q9UPN7 881 aa19.97■□□□□ 0.79
SF1-210ENST00000443908 ERBINQ96RT1 1412 aa19.96■□□□□ 0.79
SF1-210ENST00000443908 PKD2Q13563 968 aa19.96■□□□□ 0.79
SF1-210ENST00000443908 ILDR2Q71H61 639 aa19.95■□□□□ 0.78
SF1-210ENST00000443908 CAMSAP1Q5T5Y3 1602 aa19.94■□□□□ 0.78
SF1-210ENST00000443908 UBAP1LF5GYI3 381 aa19.93■□□□□ 0.78
SF1-210ENST00000443908 ZNF335Q9H4Z2 1342 aaPredicted RBP19.93■□□□□ 0.78
SF1-210ENST00000443908 KIF3BO15066 747 aa19.92■□□□□ 0.78
SF1-210ENST00000443908 EIF2AK4Q9P2K8 1649 aaKnown RBP19.91■□□□□ 0.78
SF1-210ENST00000443908 DHX57Q6P158 1386 aaKnown RBP19.89■□□□□ 0.77
SF1-210ENST00000443908 DHX29Q7Z478 1369 aaKnown RBP19.89■□□□□ 0.77
SF1-210ENST00000443908 KDM5DQ9BY66 1539 aa19.89■□□□□ 0.77
SF1-210ENST00000443908 CLTCQ00610 1675 aaKnown RBP19.88■□□□□ 0.77
SF1-210ENST00000443908 LTBP4Q8N2S1 1624 aa19.88■□□□□ 0.77
SF1-210ENST00000443908 UNC13BO14795 1591 aa19.88■□□□□ 0.77
SF1-210ENST00000443908 FBXO31Q5XUX0 539 aaPredicted RBP19.87■□□□□ 0.77
SF1-210ENST00000443908 MROH2AA6NES4 1674 aa19.87■□□□□ 0.77
SF1-210ENST00000443908 WASHC2CQ9Y4E1 1318 aa19.86■□□□□ 0.77
SF1-210ENST00000443908 SOCS7O14512 581 aa19.85■□□□□ 0.77
SF1-210ENST00000443908 DEPDC5O75140 1603 aa19.84■□□□□ 0.77
SF1-210ENST00000443908 CLSPNQ9HAW4 1339 aa19.84■□□□□ 0.77
SF1-210ENST00000443908 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.77
SF1-210ENST00000443908 IQSEC2Q5JU85 1478 aa19.82■□□□□ 0.76
SF1-210ENST00000443908 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
SF1-210ENST00000443908 RNF17Q9BXT8 1623 aaKnown RBP19.8■□□□□ 0.76
SF1-210ENST00000443908 PLA2R1Q13018 1463 aa19.8■□□□□ 0.76
SF1-210ENST00000443908 ANKLE2Q86XL3 938 aa19.8■□□□□ 0.76
SF1-210ENST00000443908 PZPP20742 1482 aa19.79■□□□□ 0.76
SF1-210ENST00000443908 CEP170BQ9Y4F5 1589 aaPredicted RBP19.79■□□□□ 0.76
SF1-210ENST00000443908 PIP4K2BP78356 416 aa19.79■□□□□ 0.76
SF1-210ENST00000443908 THEMISQ8N1K5 641 aaPredicted RBP19.79■□□□□ 0.76
SF1-210ENST00000443908 PRDM15P57071 1507 aaPredicted RBP19.79■□□□□ 0.76
SF1-210ENST00000443908 IQGAP3Q86VI3 1631 aa19.79■□□□□ 0.76
SF1-210ENST00000443908 TNRQ92752 1358 aa19.79■□□□□ 0.76
SF1-210ENST00000443908 TRIM52Q96A61 297 aa19.78■□□□□ 0.76
SF1-210ENST00000443908 MYO3AQ8NEV4 1616 aa19.77■□□□□ 0.76
SF1-210ENST00000443908 A2ML1A8K2U0 1454 aa19.77■□□□□ 0.76
SF1-210ENST00000443908 VWDEQ8N2E2 1590 aa19.77■□□□□ 0.76
SF1-210ENST00000443908 MROH1Q8NDA8 1641 aa19.76■□□□□ 0.75
SF1-210ENST00000443908 NUP155O75694 1391 aa19.76■□□□□ 0.75
SF1-210ENST00000443908 FAM135AQ9P2D6 1515 aa19.76■□□□□ 0.75
SF1-210ENST00000443908 TOM1O60784 492 aa19.75■□□□□ 0.75
SF1-210ENST00000443908 MPHOSPH9Q99550 1183 aa19.73■□□□□ 0.75
SF1-210ENST00000443908 SPATA31D1Q6ZQQ2 1576 aa19.72■□□□□ 0.75
SF1-210ENST00000443908 ZNF142P52746 1687 aaPredicted RBP19.71■□□□□ 0.75
SF1-210ENST00000443908 LMTK2Q8IWU2 1503 aa19.71■□□□□ 0.75
SF1-210ENST00000443908 KANK1Q14678 1352 aa19.7■□□□□ 0.74
SF1-210ENST00000443908 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
SF1-210ENST00000443908 HSPA1LP34931 641 aa19.69■□□□□ 0.74
SF1-210ENST00000443908 ZEB1P37275 1124 aaPredicted RBP19.68■□□□□ 0.74
SF1-210ENST00000443908 TET3O43151 1660 aa19.68■□□□□ 0.74
SF1-210ENST00000443908 ZC3H13Q5T200 1668 aaKnown RBP19.66■□□□□ 0.74
SF1-210ENST00000443908 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
SF1-210ENST00000443908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.73
SF1-210ENST00000443908 ABCC3O15438 1527 aa19.62■□□□□ 0.73
SF1-210ENST00000443908 EFCAB6Q5THR3 1501 aa19.62■□□□□ 0.73
SF1-210ENST00000443908 ANKRD30BQ9BXX2 1392 aa19.62■□□□□ 0.73
SF1-210ENST00000443908 UGGT1Q9NYU2 1555 aa19.61■□□□□ 0.73
SF1-210ENST00000443908 NLRP1Q9C000 1473 aa19.61■□□□□ 0.73
SF1-210ENST00000443908 NPHP4O75161 1426 aaPredicted RBP19.61■□□□□ 0.73
SF1-210ENST00000443908 CPS1P31327 1500 aa19.6■□□□□ 0.73
SF1-210ENST00000443908 RPRD2Q5VT52 1461 aaKnown RBP19.6■□□□□ 0.73
SF1-210ENST00000443908 CEP152O94986 1710 aa19.59■□□□□ 0.73
SF1-210ENST00000443908 E9PCH4 1651 aa19.59■□□□□ 0.73
SF1-210ENST00000443908 ARHGAP31Q2M1Z3 1444 aa19.57■□□□□ 0.72
SF1-210ENST00000443908 TXNDC2Q86VQ3 553 aa19.56■□□□□ 0.72
SF1-210ENST00000443908 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
SF1-210ENST00000443908 STAG3Q9UJ98 1225 aa19.56■□□□□ 0.72
SF1-210ENST00000443908 NEURL4Q96JN8 1562 aa19.56■□□□□ 0.72
SF1-210ENST00000443908 POLR1AO95602 1720 aaPredicted RBP19.54■□□□□ 0.72
SF1-210ENST00000443908 FOXD1Q16676 465 aa19.54■□□□□ 0.72
SF1-210ENST00000443908 TIMELESSQ9UNS1 1208 aa19.54■□□□□ 0.72
SF1-210ENST00000443908 TRPM2O94759 1503 aa19.53■□□□□ 0.72
SF1-210ENST00000443908 EID1Q9Y6B2 187 aa19.53■□□□□ 0.72
SF1-210ENST00000443908 MED14O60244 1454 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms