RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 MBD5Q9P267 1494 aa20.33■□□□□ 0.85
CHFR-204ENST00000443047 SAMD9LQ8IVG5 1584 aa20.31■□□□□ 0.84
CHFR-204ENST00000443047 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
CHFR-204ENST00000443047 CNTLNQ9NXG0 1405 aa20.3■□□□□ 0.84
CHFR-204ENST00000443047 TTC37Q6PGP7 1564 aa20.29■□□□□ 0.84
CHFR-204ENST00000443047 SPATA31E1Q6ZUB1 1445 aa20.28■□□□□ 0.84
CHFR-204ENST00000443047 ARHGAP5Q13017 1502 aa20.28■□□□□ 0.84
CHFR-204ENST00000443047 SYCP2Q9BX26 1530 aa20.27■□□□□ 0.84
CHFR-204ENST00000443047 DCAF11Q8TEB1 546 aa20.27■□□□□ 0.84
CHFR-204ENST00000443047 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
CHFR-204ENST00000443047 SHANK2Q9UPX8 1470 aa20.26■□□□□ 0.83
CHFR-204ENST00000443047 PRKRIP1Q9H875 184 aaPredicted RBP20.26■□□□□ 0.83
CHFR-204ENST00000443047 CCDC141Q6ZP82 1450 aa20.25■□□□□ 0.83
CHFR-204ENST00000443047 USP47Q96K76 1375 aa20.25■□□□□ 0.83
CHFR-204ENST00000443047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.25■□□□□ 0.83
CHFR-204ENST00000443047 ZBED9Q6R2W3 1325 aa20.24■□□□□ 0.83
CHFR-204ENST00000443047 USP35Q9P2H5 1018 aa20.23■□□□□ 0.83
CHFR-204ENST00000443047 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
CHFR-204ENST00000443047 PREX2Q70Z35 1606 aa20.22■□□□□ 0.83
CHFR-204ENST00000443047 CARD11Q9BXL7 1154 aa20.22■□□□□ 0.83
CHFR-204ENST00000443047 PKNOX2Q96KN3 472 aa20.22■□□□□ 0.83
CHFR-204ENST00000443047 WASHC2CQ9Y4E1 1318 aa20.21■□□□□ 0.83
CHFR-204ENST00000443047 ABCC2Q92887 1545 aa20.2■□□□□ 0.82
CHFR-204ENST00000443047 GSE1Q14687 1217 aa20.19■□□□□ 0.82
CHFR-204ENST00000443047 ARHGEF5Q12774 1597 aa20.19■□□□□ 0.82
CHFR-204ENST00000443047 PPM1GO15355 546 aaPredicted RBP20.18■□□□□ 0.82
CHFR-204ENST00000443047 ARHGEF12Q9NZN5 1544 aa20.18■□□□□ 0.82
CHFR-204ENST00000443047 BCORL1Q5H9F3 1711 aa20.17■□□□□ 0.82
CHFR-204ENST00000443047 ST20-MTHFSA0A0A6YYL1 179 aa20.16■□□□□ 0.82
CHFR-204ENST00000443047 PLEKHH2Q8IVE3 1493 aa20.16■□□□□ 0.82
CHFR-204ENST00000443047 FAM135AQ9P2D6 1515 aa20.16■□□□□ 0.82
CHFR-204ENST00000443047 RSPH4AQ5TD94 716 aa20.14■□□□□ 0.81
CHFR-204ENST00000443047 AFAP1Q8N556 730 aa20.13■□□□□ 0.81
CHFR-204ENST00000443047 FRAT1Q92837 279 aaPredicted RBP20.13■□□□□ 0.81
CHFR-204ENST00000443047 PDE4AP27815 886 aa20.13■□□□□ 0.81
CHFR-204ENST00000443047 SLC4A3P48751 1232 aa20.13■□□□□ 0.81
CHFR-204ENST00000443047 NBPF1Q3BBV0 1214 aa20.12■□□□□ 0.81
CHFR-204ENST00000443047 KDM5DQ9BY66 1539 aa20.11■□□□□ 0.81
CHFR-204ENST00000443047 ZCCHC11Q5TAX3 1644 aaKnown RBP20.1■□□□□ 0.81
CHFR-204ENST00000443047 EFCAB2Q5VUJ9 269 aa20.1■□□□□ 0.81
CHFR-204ENST00000443047 TRAPPC8Q9Y2L5 1435 aa20.1■□□□□ 0.81
CHFR-204ENST00000443047 MYO5CQ9NQX4 1742 aa20.09■□□□□ 0.81
CHFR-204ENST00000443047 CCDC144AA2RUR9 1427 aa20.09■□□□□ 0.81
CHFR-204ENST00000443047 KDM5CP41229 1560 aa20.09■□□□□ 0.81
CHFR-204ENST00000443047 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
CHFR-204ENST00000443047 CLASP1Q7Z460 1538 aa20.08■□□□□ 0.81
CHFR-204ENST00000443047 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.81
CHFR-204ENST00000443047 PLA2R1Q13018 1463 aa20.08■□□□□ 0.8
CHFR-204ENST00000443047 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.8
CHFR-204ENST00000443047 NFKBIBQ15653 356 aa20.07■□□□□ 0.8
CHFR-204ENST00000443047 PLCH2O75038 1416 aa20.07■□□□□ 0.8
CHFR-204ENST00000443047 UHRF1BP1Q6BDS2 1440 aa20.07■□□□□ 0.8
CHFR-204ENST00000443047 RALGAPBQ86X10 1494 aa20.06■□□□□ 0.8
CHFR-204ENST00000443047 RSPH6AQ9H0K4 717 aa20.05■□□□□ 0.8
CHFR-204ENST00000443047 DAXXQ9UER7 740 aaPredicted RBP20.04■□□□□ 0.8
CHFR-204ENST00000443047 TCERG1O14776 1098 aaKnown RBP20.02■□□□□ 0.8
CHFR-204ENST00000443047 SKAP1Q86WV1 359 aa20.02■□□□□ 0.8
CHFR-204ENST00000443047 EXOC6Q8TAG9 804 aa20.02■□□□□ 0.8
CHFR-204ENST00000443047 BACH2Q9BYV9 841 aa20.01■□□□□ 0.79
CHFR-204ENST00000443047 POLR1AO95602 1720 aaPredicted RBP20.01■□□□□ 0.79
CHFR-204ENST00000443047 SPAG9O60271 1321 aaKnown RBP20.01■□□□□ 0.79
CHFR-204ENST00000443047 VSIG10Q8N0Z9 540 aa20■□□□□ 0.79
CHFR-204ENST00000443047 MAST1Q9Y2H9 1570 aa19.98■□□□□ 0.79
CHFR-204ENST00000443047 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
CHFR-204ENST00000443047 A2MP01023 1474 aa19.98■□□□□ 0.79
CHFR-204ENST00000443047 PRAG1Q86YV5 1406 aa19.97■□□□□ 0.79
CHFR-204ENST00000443047 UNC13BO14795 1591 aa19.96■□□□□ 0.79
CHFR-204ENST00000443047 UHRF1BP1LA0JNW5 1464 aa19.96■□□□□ 0.79
CHFR-204ENST00000443047 ABCC1P33527 1531 aa19.95■□□□□ 0.78
CHFR-204ENST00000443047 DUOX2Q9NRD8 1548 aa19.95■□□□□ 0.78
CHFR-204ENST00000443047 PLXNC1O60486 1568 aa19.94■□□□□ 0.78
CHFR-204ENST00000443047 GLIPR1L2Q4G1C9 344 aa19.94■□□□□ 0.78
CHFR-204ENST00000443047 RNF123Q5XPI4 1314 aa19.93■□□□□ 0.78
CHFR-204ENST00000443047 DDRGK1Q96HY6 314 aa19.92■□□□□ 0.78
CHFR-204ENST00000443047 ZMYND15Q9H091 742 aa19.92■□□□□ 0.78
CHFR-204ENST00000443047 TMC1Q8TDI8 760 aa19.92■□□□□ 0.78
CHFR-204ENST00000443047 FAM43AQ8N2R8 423 aa19.92■□□□□ 0.78
CHFR-204ENST00000443047 KIF3BO15066 747 aa19.91■□□□□ 0.78
CHFR-204ENST00000443047 FRAT2O75474 233 aaPredicted RBP19.91■□□□□ 0.78
CHFR-204ENST00000443047 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
CHFR-204ENST00000443047 ERBINQ96RT1 1412 aa19.91■□□□□ 0.78
CHFR-204ENST00000443047 SCAPERQ9BY12 1400 aa19.9■□□□□ 0.78
CHFR-204ENST00000443047 ARID4BQ4LE39 1312 aaPredicted RBP19.89■□□□□ 0.78
CHFR-204ENST00000443047 WDR7Q9Y4E6 1490 aa19.89■□□□□ 0.77
CHFR-204ENST00000443047 TRPM1Q7Z4N2 1603 aa19.88■□□□□ 0.77
CHFR-204ENST00000443047 DISP3Q9P2K9 1392 aa19.88■□□□□ 0.77
CHFR-204ENST00000443047 ARXQ96QS3 562 aa19.88■□□□□ 0.77
CHFR-204ENST00000443047 FANCAO15360 1455 aa19.88■□□□□ 0.77
CHFR-204ENST00000443047 CC2D1BQ5T0F9 858 aaKnown RBP19.86■□□□□ 0.77
CHFR-204ENST00000443047 PNISRQ8TF01 805 aaKnown RBP19.86■□□□□ 0.77
CHFR-204ENST00000443047 RRP1P56182 461 aaKnown RBP19.86■□□□□ 0.77
CHFR-204ENST00000443047 TESK2Q96S53 571 aa19.86■□□□□ 0.77
CHFR-204ENST00000443047 ASXL2Q76L83 1435 aa19.84■□□□□ 0.77
CHFR-204ENST00000443047 ZFYVE16Q7Z3T8 1539 aa19.84■□□□□ 0.77
CHFR-204ENST00000443047 MAGI2Q86UL8 1455 aa19.84■□□□□ 0.77
CHFR-204ENST00000443047 MS4A1P11836 297 aa19.84■□□□□ 0.77
CHFR-204ENST00000443047 ADGRL1O94910 1474 aa19.82■□□□□ 0.76
CHFR-204ENST00000443047 PANK3Q9H999 370 aa19.81■□□□□ 0.76
CHFR-204ENST00000443047 PLIN1O60240 522 aa19.81■□□□□ 0.76
CHFR-204ENST00000443047 NAP1L5Q96NT1 182 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms