RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CLUAP1Q96AJ1 413 aa12.72□□□□□ -0.37
LIN54-202ENST00000442461 CBX1P83916 185 aa12.72□□□□□ -0.37
LIN54-202ENST00000442461 FGD1P98174 961 aa12.71□□□□□ -0.37
LIN54-202ENST00000442461 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
LIN54-202ENST00000442461 L3MBTL2Q969R5 705 aa12.71□□□□□ -0.37
LIN54-202ENST00000442461 RB1CC1Q8TDY2 1594 aa12.71□□□□□ -0.37
LIN54-202ENST00000442461 TPM4P67936 248 aa12.71□□□□□ -0.38
LIN54-202ENST00000442461 PDCL2Q8N4E4 241 aa12.71□□□□□ -0.38
LIN54-202ENST00000442461 KIF3AQ9Y496 699 aa12.71□□□□□ -0.38
LIN54-202ENST00000442461 CHGAP10645 457 aaKnown RBP12.71□□□□□ -0.38
LIN54-202ENST00000442461 MCTP1Q6DN14 999 aa12.71□□□□□ -0.38
LIN54-202ENST00000442461 TPM3P06753 285 aa12.7□□□□□ -0.38
LIN54-202ENST00000442461 RNF214Q8ND24 703 aa12.7□□□□□ -0.38
LIN54-202ENST00000442461 KIF15Q9NS87 1388 aa12.7□□□□□ -0.38
LIN54-202ENST00000442461 IFT57Q9NWB7 429 aa12.7□□□□□ -0.38
LIN54-202ENST00000442461 CAVIN1Q6NZI2 390 aaKnown RBP12.69□□□□□ -0.38
LIN54-202ENST00000442461 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
LIN54-202ENST00000442461 GNL2Q13823 731 aaKnown RBP12.69□□□□□ -0.38
LIN54-202ENST00000442461 AKNAQ7Z591 1439 aa12.69□□□□□ -0.38
LIN54-202ENST00000442461 TAF7LQ5H9L4 462 aa12.68□□□□□ -0.38
LIN54-202ENST00000442461 GOLGA6L19H0YKK7 550 aa12.68□□□□□ -0.38
LIN54-202ENST00000442461 ATP6V1DQ9Y5K8 247 aa12.68□□□□□ -0.38
LIN54-202ENST00000442461 DYNC1I1O14576 645 aa12.68□□□□□ -0.38
LIN54-202ENST00000442461 CALCOCO1Q9P1Z2 691 aa12.68□□□□□ -0.38
LIN54-202ENST00000442461 COG6Q9Y2V7 657 aa12.68□□□□□ -0.38
LIN54-202ENST00000442461 NOC3LQ8WTT2 800 aaKnown RBP12.67□□□□□ -0.38
LIN54-202ENST00000442461 CCAR2Q8N163 923 aaKnown RBP12.66□□□□□ -0.38
LIN54-202ENST00000442461 DCAF11Q8TEB1 546 aa12.66□□□□□ -0.38
LIN54-202ENST00000442461 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
LIN54-202ENST00000442461 LETM1O95202 739 aaPredicted RBP12.65□□□□□ -0.38
LIN54-202ENST00000442461 MBD3O95983 291 aa12.65□□□□□ -0.38
LIN54-202ENST00000442461 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
LIN54-202ENST00000442461 SMG6Q86US8 1419 aaKnown RBP12.65□□□□□ -0.39
LIN54-202ENST00000442461 SCRIBQ14160 1630 aa12.65□□□□□ -0.39
LIN54-202ENST00000442461 BECN2A8MW95 431 aa12.64□□□□□ -0.39
LIN54-202ENST00000442461 SMAP1Q8IYB5 467 aaPredicted RBP12.64□□□□□ -0.39
LIN54-202ENST00000442461 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
LIN54-202ENST00000442461 IRX3P78415 501 aaPredicted RBP12.64□□□□□ -0.39
LIN54-202ENST00000442461 FOXD4L6Q3SYB3 417 aaPredicted RBP12.64□□□□□ -0.39
LIN54-202ENST00000442461 FOXD4L3Q6VB84 417 aaPredicted RBP12.64□□□□□ -0.39
LIN54-202ENST00000442461 NOL8Q76FK4 1167 aaKnown RBP12.64□□□□□ -0.39
LIN54-202ENST00000442461 NAP1L2Q9ULW6 460 aaPredicted RBP12.64□□□□□ -0.39
LIN54-202ENST00000442461 CNTLNQ9NXG0 1405 aa12.63□□□□□ -0.39
LIN54-202ENST00000442461 ERICH4A6NGS2 130 aa12.63□□□□□ -0.39
LIN54-202ENST00000442461 APBB1O00213 710 aa12.63□□□□□ -0.39
LIN54-202ENST00000442461 MNS1Q8NEH6 495 aa12.63□□□□□ -0.39
LIN54-202ENST00000442461 MPHOSPH9Q99550 1183 aa12.63□□□□□ -0.39
LIN54-202ENST00000442461 FHAD1B1AJZ9 1412 aa12.63□□□□□ -0.39
LIN54-202ENST00000442461 HOMER1Q86YM7 354 aa12.62□□□□□ -0.39
LIN54-202ENST00000442461 GTPBP4Q9BZE4 634 aaKnown RBP12.62□□□□□ -0.39
LIN54-202ENST00000442461 E9PSI1 815 aa12.62□□□□□ -0.39
LIN54-202ENST00000442461 XRCC6P12956 609 aaKnown RBP eCLIP12.62□□□□□ -0.39
LIN54-202ENST00000442461 HSP90B2PQ58FF3 399 aa12.62□□□□□ -0.39
LIN54-202ENST00000442461 FMN1Q68DA7 1419 aa12.62□□□□□ -0.39
LIN54-202ENST00000442461 XPCQ01831 940 aaPredicted RBP12.62□□□□□ -0.39
LIN54-202ENST00000442461 LEKR1Q6ZMV7 388 aa12.62□□□□□ -0.39
LIN54-202ENST00000442461 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
LIN54-202ENST00000442461 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
LIN54-202ENST00000442461 FOXD1Q16676 465 aa12.61□□□□□ -0.39
LIN54-202ENST00000442461 CCDC112Q8NEF3 446 aa12.61□□□□□ -0.39
LIN54-202ENST00000442461 RDXP35241 583 aaKnown RBP12.61□□□□□ -0.39
LIN54-202ENST00000442461 AAMPQ13685 434 aa12.61□□□□□ -0.39
LIN54-202ENST00000442461 AK7Q96M32 723 aa12.61□□□□□ -0.39
LIN54-202ENST00000442461 TSPY26PQ9H489 355 aa12.6□□□□□ -0.39
LIN54-202ENST00000442461 CCDC7Q96M83 1385 aa12.6□□□□□ -0.39
LIN54-202ENST00000442461 PLCD3Q8N3E9 789 aa12.6□□□□□ -0.39
LIN54-202ENST00000442461 RRAGDQ9NQL2 400 aaPredicted RBP12.6□□□□□ -0.39
LIN54-202ENST00000442461 TPD52L1Q16890 204 aaPredicted RBP12.6□□□□□ -0.39
LIN54-202ENST00000442461 TIGD1Q96MW7 591 aa12.6□□□□□ -0.39
LIN54-202ENST00000442461 ACBD3Q9H3P7 528 aa12.59□□□□□ -0.39
LIN54-202ENST00000442461 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
LIN54-202ENST00000442461 CHMP4AQ9BY43 222 aa12.59□□□□□ -0.39
LIN54-202ENST00000442461 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
LIN54-202ENST00000442461 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
LIN54-202ENST00000442461 H0YHG0 523 aa12.59□□□□□ -0.39
LIN54-202ENST00000442461 MCM5P33992 734 aa12.59□□□□□ -0.39
LIN54-202ENST00000442461 ARHGAP35Q9NRY4 1499 aa12.58□□□□□ -0.4
LIN54-202ENST00000442461 PPP4R3BQ5MIZ7 849 aa12.58□□□□□ -0.4
LIN54-202ENST00000442461 PRPF40AO75400 957 aaKnown RBP12.58□□□□□ -0.4
LIN54-202ENST00000442461 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
LIN54-202ENST00000442461 PATL2C9JE40 543 aaKnown RBP12.58□□□□□ -0.4
LIN54-202ENST00000442461 KIF20AO95235 890 aa12.58□□□□□ -0.4
LIN54-202ENST00000442461 USP8P40818 1118 aa12.58□□□□□ -0.4
LIN54-202ENST00000442461 ANKRD45Q5TZF3 282 aa12.58□□□□□ -0.4
LIN54-202ENST00000442461 MORC1Q86VD1 984 aa12.58□□□□□ -0.4
LIN54-202ENST00000442461 OS9Q13438 667 aaPredicted RBP12.57□□□□□ -0.4
LIN54-202ENST00000442461 KIF27Q86VH2 1401 aa12.57□□□□□ -0.4
LIN54-202ENST00000442461 NBPF1Q3BBV0 1214 aa12.57□□□□□ -0.4
LIN54-202ENST00000442461 ZKSCAN2Q63HK3 967 aa12.57□□□□□ -0.4
LIN54-202ENST00000442461 REC8O95072 547 aa12.56□□□□□ -0.4
LIN54-202ENST00000442461 PANK2Q9BZ23 570 aa12.55□□□□□ -0.4
LIN54-202ENST00000442461 CCDC88BA6NC98 1476 aa12.55□□□□□ -0.4
LIN54-202ENST00000442461 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
LIN54-202ENST00000442461 MPNDQ8N594 471 aa12.55□□□□□ -0.4
LIN54-202ENST00000442461 CCDC94Q9BW85 323 aaPredicted RBP12.55□□□□□ -0.4
LIN54-202ENST00000442461 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
LIN54-202ENST00000442461 NGEFQ8N5V2 710 aa12.54□□□□□ -0.4
LIN54-202ENST00000442461 OFD1O75665 1012 aa12.54□□□□□ -0.4
LIN54-202ENST00000442461 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
LIN54-202ENST00000442461 KIF7Q2M1P5 1343 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms