RNA–Protein interactions for RNA: ENST00000442250.5

ITGA6-206, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-206ENST00000442250 ARID4BQ4LE39 1312 aaPredicted RBP12.69□□□□□ -0.38
ITGA6-206ENST00000442250 CCDC141Q6ZP82 1450 aa12.69□□□□□ -0.38
ITGA6-206ENST00000442250 PLCH2O75038 1416 aa12.68□□□□□ -0.38
ITGA6-206ENST00000442250 FANCAO15360 1455 aa12.68□□□□□ -0.38
ITGA6-206ENST00000442250 WDR7Q9Y4E6 1490 aa12.68□□□□□ -0.38
ITGA6-206ENST00000442250 ROCK1Q13464 1354 aa12.68□□□□□ -0.38
ITGA6-206ENST00000442250 ZCCHC11Q5TAX3 1644 aaKnown RBP12.67□□□□□ -0.38
ITGA6-206ENST00000442250 EIF5BO60841 1220 aaKnown RBP12.67□□□□□ -0.38
ITGA6-206ENST00000442250 ARHGEF12Q9NZN5 1544 aa12.67□□□□□ -0.38
ITGA6-206ENST00000442250 ANKRD30BQ9BXX2 1392 aa12.66□□□□□ -0.38
ITGA6-206ENST00000442250 MBD5Q9P267 1494 aa12.66□□□□□ -0.38
ITGA6-206ENST00000442250 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
ITGA6-206ENST00000442250 CCDC184Q52MB2 194 aa12.66□□□□□ -0.38
ITGA6-206ENST00000442250 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
ITGA6-206ENST00000442250 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
ITGA6-206ENST00000442250 ADGRL1O94910 1474 aa12.65□□□□□ -0.38
ITGA6-206ENST00000442250 WASHC2CQ9Y4E1 1318 aa12.65□□□□□ -0.38
ITGA6-206ENST00000442250 NBPF1Q3BBV0 1214 aa12.65□□□□□ -0.38
ITGA6-206ENST00000442250 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
ITGA6-206ENST00000442250 KDM5BQ9UGL1 1544 aa12.65□□□□□ -0.38
ITGA6-206ENST00000442250 ADCY10Q96PN6 1610 aa12.64□□□□□ -0.39
ITGA6-206ENST00000442250 ANP32AP39687 249 aaKnown RBP12.64□□□□□ -0.39
ITGA6-206ENST00000442250 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
ITGA6-206ENST00000442250 SHROOM2Q13796 1616 aa12.64□□□□□ -0.39
ITGA6-206ENST00000442250 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
ITGA6-206ENST00000442250 ITSN2Q9NZM3 1697 aa12.63□□□□□ -0.39
ITGA6-206ENST00000442250 DENND4BO75064 1496 aaPredicted RBP12.62□□□□□ -0.39
ITGA6-206ENST00000442250 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
ITGA6-206ENST00000442250 TIMELESSQ9UNS1 1208 aa12.62□□□□□ -0.39
ITGA6-206ENST00000442250 SAFB2Q14151 953 aaKnown RBP eCLIP12.61□□□□□ -0.39
ITGA6-206ENST00000442250 ST20-MTHFSA0A0A6YYL1 179 aa12.61□□□□□ -0.39
ITGA6-206ENST00000442250 KIAA1107Q9UPP5 1409 aa12.61□□□□□ -0.39
ITGA6-206ENST00000442250 PZPP20742 1482 aa12.61□□□□□ -0.39
ITGA6-206ENST00000442250 CCDC144AA2RUR9 1427 aa12.6□□□□□ -0.39
ITGA6-206ENST00000442250 ESF1Q9H501 851 aaKnown RBP12.6□□□□□ -0.39
ITGA6-206ENST00000442250 CDC42BPBQ9Y5S2 1711 aa12.59□□□□□ -0.39
ITGA6-206ENST00000442250 WASHC2AQ641Q2 1341 aa12.57□□□□□ -0.4
ITGA6-206ENST00000442250 IPO9Q96P70 1041 aaKnown RBP12.57□□□□□ -0.4
ITGA6-206ENST00000442250 MRS2Q9HD23 443 aa12.57□□□□□ -0.4
ITGA6-206ENST00000442250 KANK1Q14678 1352 aa12.57□□□□□ -0.4
ITGA6-206ENST00000442250 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
ITGA6-206ENST00000442250 NEFMP07197 916 aa12.56□□□□□ -0.4
ITGA6-206ENST00000442250 UHRF1BP1LA0JNW5 1464 aa12.56□□□□□ -0.4
ITGA6-206ENST00000442250 STK26Q9P289 416 aa12.55□□□□□ -0.4
ITGA6-206ENST00000442250 ERICH6BQ5W0A0 696 aa12.55□□□□□ -0.4
ITGA6-206ENST00000442250 FBXO31Q5XUX0 539 aaPredicted RBP12.55□□□□□ -0.4
ITGA6-206ENST00000442250 CFAP65Q6ZU64 1925 aaKnown RBP12.54□□□□□ -0.4
ITGA6-206ENST00000442250 TMEM132EQ6IEE7 984 aa12.53□□□□□ -0.4
ITGA6-206ENST00000442250 PREX2Q70Z35 1606 aa12.53□□□□□ -0.4
ITGA6-206ENST00000442250 MYO5CQ9NQX4 1742 aa12.53□□□□□ -0.4
ITGA6-206ENST00000442250 USP47Q96K76 1375 aa12.52□□□□□ -0.41
ITGA6-206ENST00000442250 CFAP70Q5T0N1 1121 aa12.52□□□□□ -0.41
ITGA6-206ENST00000442250 RPRD2Q5VT52 1461 aaKnown RBP12.52□□□□□ -0.41
ITGA6-206ENST00000442250 BRPF3Q9ULD4 1205 aa12.52□□□□□ -0.41
ITGA6-206ENST00000442250 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
ITGA6-206ENST00000442250 TSPOAP1O95153 1857 aa12.51□□□□□ -0.41
ITGA6-206ENST00000442250 ADGRL2O95490 1459 aa12.51□□□□□ -0.41
ITGA6-206ENST00000442250 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
ITGA6-206ENST00000442250 FAM135AQ9P2D6 1515 aa12.5□□□□□ -0.41
ITGA6-206ENST00000442250 KIF7Q2M1P5 1343 aa12.5□□□□□ -0.41
ITGA6-206ENST00000442250 CC2D1BQ5T0F9 858 aaKnown RBP12.49□□□□□ -0.41
ITGA6-206ENST00000442250 YEATS2Q9ULM3 1422 aa12.48□□□□□ -0.41
ITGA6-206ENST00000442250 CEBPAP49715 358 aaPredicted RBP12.48□□□□□ -0.41
ITGA6-206ENST00000442250 DHX29Q7Z478 1369 aaKnown RBP12.48□□□□□ -0.41
ITGA6-206ENST00000442250 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
ITGA6-206ENST00000442250 RIMBP3CA6NJZ7 1639 aa12.47□□□□□ -0.41
ITGA6-206ENST00000442250 RIMBP3BA6NNM3 1639 aa12.47□□□□□ -0.41
ITGA6-206ENST00000442250 RIMBP3Q9UFD9 1639 aa12.47□□□□□ -0.41
ITGA6-206ENST00000442250 ABCC1P33527 1531 aa12.47□□□□□ -0.41
ITGA6-206ENST00000442250 SHANK2Q9UPX8 1470 aa12.46□□□□□ -0.41
ITGA6-206ENST00000442250 ADGRF5Q8IZF2 1346 aa12.45□□□□□ -0.42
ITGA6-206ENST00000442250 TNNT2P45379 298 aaPredicted RBP12.45□□□□□ -0.42
ITGA6-206ENST00000442250 ADGBQ8N7X0 1667 aa12.44□□□□□ -0.42
ITGA6-206ENST00000442250 ATP7AQ04656 1500 aa12.43□□□□□ -0.42
ITGA6-206ENST00000442250 DUOX2Q9NRD8 1548 aa12.43□□□□□ -0.42
ITGA6-206ENST00000442250 ARHGEF5Q12774 1597 aa12.43□□□□□ -0.42
ITGA6-206ENST00000442250 IDI1Q13907 227 aa12.43□□□□□ -0.42
ITGA6-206ENST00000442250 UGGT1Q9NYU2 1555 aa12.43□□□□□ -0.42
ITGA6-206ENST00000442250 A2MP01023 1474 aa12.43□□□□□ -0.42
ITGA6-206ENST00000442250 ZNF518AQ6AHZ1 1483 aa12.43□□□□□ -0.42
ITGA6-206ENST00000442250 CCDC7Q96M83 1385 aa12.42□□□□□ -0.42
ITGA6-206ENST00000442250 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
ITGA6-206ENST00000442250 SLC4A3P48751 1232 aa12.42□□□□□ -0.42
ITGA6-206ENST00000442250 UBE2Q2Q8WVN8 375 aa12.42□□□□□ -0.42
ITGA6-206ENST00000442250 PLA2R1Q13018 1463 aa12.42□□□□□ -0.42
ITGA6-206ENST00000442250 TEX14Q8IWB6 1497 aa12.42□□□□□ -0.42
ITGA6-206ENST00000442250 PRKRIP1Q9H875 184 aaPredicted RBP12.41□□□□□ -0.42
ITGA6-206ENST00000442250 NUTM2FA1L443 756 aa12.41□□□□□ -0.42
ITGA6-206ENST00000442250 SKAP1Q86WV1 359 aa12.41□□□□□ -0.42
ITGA6-206ENST00000442250 CROCC2H7BZ55 1655 aa12.4□□□□□ -0.42
ITGA6-206ENST00000442250 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
ITGA6-206ENST00000442250 ZBED9Q6R2W3 1325 aa12.4□□□□□ -0.43
ITGA6-206ENST00000442250 POGZQ7Z3K3 1410 aa12.39□□□□□ -0.43
ITGA6-206ENST00000442250 ERBINQ96RT1 1412 aa12.39□□□□□ -0.43
ITGA6-206ENST00000442250 PANK3Q9H999 370 aa12.38□□□□□ -0.43
ITGA6-206ENST00000442250 ZFYVE16Q7Z3T8 1539 aa12.38□□□□□ -0.43
ITGA6-206ENST00000442250 TMF1P82094 1093 aa12.37□□□□□ -0.43
ITGA6-206ENST00000442250 ABCA9Q8IUA7 1624 aa12.36□□□□□ -0.43
ITGA6-206ENST00000442250 RTEL1-TNFRSF6BF6WH68 1400 aa12.35□□□□□ -0.43
ITGA6-206ENST00000442250 POGKQ9P215 609 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms