RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 SLKQ9H2G2 1235 aaPredicted RBP8.24□□□□□ -1.09
USP46-201ENST00000441222 FAM184AQ8NB25 1140 aa8.23□□□□□ -1.09
USP46-201ENST00000441222 PES1O00541 588 aaKnown RBP8.23□□□□□ -1.09
USP46-201ENST00000441222 SYNE3Q6ZMZ3 975 aa8.23□□□□□ -1.09
USP46-201ENST00000441222 TCEAL9Q9UHQ7 104 aa8.23□□□□□ -1.09
USP46-201ENST00000441222 CDR1P51861 262 aa8.23□□□□□ -1.09
USP46-201ENST00000441222 BECN2A8MW95 431 aa8.23□□□□□ -1.09
USP46-201ENST00000441222 RRP12Q5JTH9 1297 aaKnown RBP8.23□□□□□ -1.09
USP46-201ENST00000441222 ZNF330Q9Y3S2 320 aaPredicted RBP8.23□□□□□ -1.09
USP46-201ENST00000441222 VPS53Q5VIR6 699 aa8.23□□□□□ -1.09
USP46-201ENST00000441222 GTF2E1P29083 439 aaPredicted RBP8.22□□□□□ -1.09
USP46-201ENST00000441222 KRI1Q8N9T8 703 aaKnown RBP8.22□□□□□ -1.09
USP46-201ENST00000441222 IPO9Q96P70 1041 aaKnown RBP8.22□□□□□ -1.09
USP46-201ENST00000441222 SIN3AQ96ST3 1273 aa8.22□□□□□ -1.09
USP46-201ENST00000441222 RSPH6AQ9H0K4 717 aa8.22□□□□□ -1.09
USP46-201ENST00000441222 MFAP1P55081 439 aaKnown RBP8.22□□□□□ -1.09
USP46-201ENST00000441222 HSP90AA2PQ14568 343 aaPredicted RBP8.22□□□□□ -1.09
USP46-201ENST00000441222 EID1Q9Y6B2 187 aa8.22□□□□□ -1.09
USP46-201ENST00000441222 NOL10Q9BSC4 688 aaKnown RBP8.21□□□□□ -1.09
USP46-201ENST00000441222 RUFY2Q8WXA3 655 aa8.21□□□□□ -1.09
USP46-201ENST00000441222 BAZ1AQ9NRL2 1556 aaPredicted RBP8.21□□□□□ -1.1
USP46-201ENST00000441222 STK26Q9P289 416 aa8.21□□□□□ -1.1
USP46-201ENST00000441222 CENPJQ9HC77 1338 aaPredicted RBP8.2□□□□□ -1.1
USP46-201ENST00000441222 TRIM29Q14134 588 aa8.2□□□□□ -1.1
USP46-201ENST00000441222 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
USP46-201ENST00000441222 TRHP20396 242 aaPredicted RBP8.2□□□□□ -1.1
USP46-201ENST00000441222 TOMM22Q9NS69 142 aa8.2□□□□□ -1.1
USP46-201ENST00000441222 RSPH4AQ5TD94 716 aa8.2□□□□□ -1.1
USP46-201ENST00000441222 ACBD3Q9H3P7 528 aa8.2□□□□□ -1.1
USP46-201ENST00000441222 SAFB2Q14151 953 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP46-201ENST00000441222 ANKRD30AQ9BXX3 1397 aa8.19□□□□□ -1.1
USP46-201ENST00000441222 PDE4CQ08493 712 aa8.19□□□□□ -1.1
USP46-201ENST00000441222 RDXP35241 583 aaKnown RBP8.19□□□□□ -1.1
USP46-201ENST00000441222 SLC4A10Q6U841 1118 aa8.19□□□□□ -1.1
USP46-201ENST00000441222 AMPHP49418 695 aa8.19□□□□□ -1.1
USP46-201ENST00000441222 NLRP13Q86W25 1043 aa8.19□□□□□ -1.1
USP46-201ENST00000441222 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
USP46-201ENST00000441222 MLECQ14165 292 aa8.18□□□□□ -1.1
USP46-201ENST00000441222 UACAQ9BZF9 1416 aa8.18□□□□□ -1.1
USP46-201ENST00000441222 FMN1Q68DA7 1419 aa8.18□□□□□ -1.1
USP46-201ENST00000441222 NOM1Q5C9Z4 860 aaKnown RBP8.18□□□□□ -1.1
USP46-201ENST00000441222 AK7Q96M32 723 aa8.18□□□□□ -1.1
USP46-201ENST00000441222 CTDP1Q9Y5B0 961 aaPredicted RBP8.18□□□□□ -1.1
USP46-201ENST00000441222 ROCK1Q13464 1354 aa8.18□□□□□ -1.1
USP46-201ENST00000441222 REC8O95072 547 aa8.18□□□□□ -1.1
USP46-201ENST00000441222 HSPA5P11021 654 aaKnown RBP8.18□□□□□ -1.1
USP46-201ENST00000441222 GGT6Q6P531 493 aa8.18□□□□□ -1.1
USP46-201ENST00000441222 CCAR2Q8N163 923 aaKnown RBP8.18□□□□□ -1.1
USP46-201ENST00000441222 PKD2Q13563 968 aa8.17□□□□□ -1.1
USP46-201ENST00000441222 WWC1Q8IX03 1113 aa8.17□□□□□ -1.1
USP46-201ENST00000441222 CCDC9Q9Y3X0 531 aaKnown RBP8.17□□□□□ -1.1
USP46-201ENST00000441222 CENPQQ7L2Z9 268 aaPredicted RBP8.17□□□□□ -1.1
USP46-201ENST00000441222 NGDNQ8NEJ9 315 aaKnown RBP8.17□□□□□ -1.1
USP46-201ENST00000441222 NGEFQ8N5V2 710 aa8.17□□□□□ -1.1
USP46-201ENST00000441222 RUFY1Q96T51 708 aa8.17□□□□□ -1.1
USP46-201ENST00000441222 CARMIL1Q5VZK9 1371 aa8.17□□□□□ -1.1
USP46-201ENST00000441222 NEXNQ0ZGT2 675 aa8.17□□□□□ -1.1
USP46-201ENST00000441222 EFCAB2Q5VUJ9 269 aa8.17□□□□□ -1.1
USP46-201ENST00000441222 ARID3AQ99856 593 aa8.17□□□□□ -1.1
USP46-201ENST00000441222 MYO6Q9UM54 1294 aa8.17□□□□□ -1.1
USP46-201ENST00000441222 ZKSCAN1P17029 563 aaPredicted RBP8.17□□□□□ -1.1
USP46-201ENST00000441222 RNF20Q5VTR2 975 aa8.16□□□□□ -1.1
USP46-201ENST00000441222 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP46-201ENST00000441222 DDX49Q9Y6V7 483 aaKnown RBP8.16□□□□□ -1.1
USP46-201ENST00000441222 CCDC173Q0VFZ6 552 aa8.16□□□□□ -1.1
USP46-201ENST00000441222 TRDNQ13061 729 aa8.16□□□□□ -1.1
USP46-201ENST00000441222 PCMTD1Q96MG8 357 aaPredicted RBP8.16□□□□□ -1.1
USP46-201ENST00000441222 DCTN1Q14203 1278 aa8.15□□□□□ -1.1
USP46-201ENST00000441222 ODF2Q5BJF6 829 aa8.15□□□□□ -1.1
USP46-201ENST00000441222 KIF15Q9NS87 1388 aa8.15□□□□□ -1.1
USP46-201ENST00000441222 C1orf141Q5JVX7 400 aa8.15□□□□□ -1.1
USP46-201ENST00000441222 CNKSR2Q8WXI2 1034 aa8.15□□□□□ -1.1
USP46-201ENST00000441222 ARGLU1Q9NWB6 273 aaPredicted RBP8.15□□□□□ -1.1
USP46-201ENST00000441222 NUP155O75694 1391 aa8.15□□□□□ -1.1
USP46-201ENST00000441222 DIAPH3Q9NSV4 1193 aa8.15□□□□□ -1.11
USP46-201ENST00000441222 CCDC43Q96MW1 224 aaKnown RBP8.15□□□□□ -1.11
USP46-201ENST00000441222 ZNF771Q7L3S4 317 aaPredicted RBP8.14□□□□□ -1.11
USP46-201ENST00000441222 RILPL2Q969X0 211 aa8.14□□□□□ -1.11
USP46-201ENST00000441222 CUX2O14529 1486 aa8.14□□□□□ -1.11
USP46-201ENST00000441222 ERICH2A1L162 156 aa8.14□□□□□ -1.11
USP46-201ENST00000441222 FAM161AQ3B820 660 aa8.14□□□□□ -1.11
USP46-201ENST00000441222 MTERF4Q7Z6M4 381 aaKnown RBP8.14□□□□□ -1.11
USP46-201ENST00000441222 HOMER1Q86YM7 354 aa8.13□□□□□ -1.11
USP46-201ENST00000441222 CCDC18Q5T9S5 1454 aa8.13□□□□□ -1.11
USP46-201ENST00000441222 CPLX1O14810 134 aa8.13□□□□□ -1.11
USP46-201ENST00000441222 MCTP1Q6DN14 999 aa8.13□□□□□ -1.11
USP46-201ENST00000441222 SAFBQ15424 915 aaKnown RBP eCLIP8.13□□□□□ -1.11
USP46-201ENST00000441222 R3HCC1Q9Y3T6 440 aaKnown RBP8.13□□□□□ -1.11
USP46-201ENST00000441222 VPS8Q8N3P4 1428 aa8.13□□□□□ -1.11
USP46-201ENST00000441222 DDX58O95786 925 aaKnown RBP8.13□□□□□ -1.11
USP46-201ENST00000441222 CT47A1Q5JQC4 288 aaPredicted RBP8.13□□□□□ -1.11
USP46-201ENST00000441222 MPHOSPH9Q99550 1183 aa8.13□□□□□ -1.11
USP46-201ENST00000441222 HSP90B2PQ58FF3 399 aa8.13□□□□□ -1.11
USP46-201ENST00000441222 CCDC191Q8NCU4 936 aa8.12□□□□□ -1.11
USP46-201ENST00000441222 CGNL1Q0VF96 1302 aa8.12□□□□□ -1.11
USP46-201ENST00000441222 NAT10Q9H0A0 1025 aaKnown RBP8.12□□□□□ -1.11
USP46-201ENST00000441222 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.12□□□□□ -1.11
USP46-201ENST00000441222 E9PSI1 815 aa8.12□□□□□ -1.11
USP46-201ENST00000441222 SASS6Q6UVJ0 657 aa8.12□□□□□ -1.11
USP46-201ENST00000441222 ERCC4Q92889 916 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms