RNA–Protein interactions for RNA: ENST00000441012.6

NR1H3-211, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-211ENST00000441012 LMTK3Q96Q04 1460 aa21.31■■□□□ 1
NR1H3-211ENST00000441012 MBD5Q9P267 1494 aa21.31■■□□□ 1
NR1H3-211ENST00000441012 ZNF777Q9ULD5 760 aaPredicted RBP21.29■■□□□ 1
NR1H3-211ENST00000441012 TSPY4P0CV99 314 aa21.29■■□□□ 1
NR1H3-211ENST00000441012 TSPY10P0CW01 314 aa21.29■■□□□ 1
NR1H3-211ENST00000441012 EFCAB2Q5VUJ9 269 aa21.29■■□□□ 1
NR1H3-211ENST00000441012 KDM5CP41229 1560 aa21.28■■□□□ 1
NR1H3-211ENST00000441012 HSPA5P11021 654 aaKnown RBP21.27■■□□□ 1
NR1H3-211ENST00000441012 CCDC141Q6ZP82 1450 aa21.27■■□□□ 1
NR1H3-211ENST00000441012 ATP10AO60312 1499 aa21.26■□□□□ 0.99
NR1H3-211ENST00000441012 ZNF518AQ6AHZ1 1483 aa21.26■□□□□ 0.99
NR1H3-211ENST00000441012 MAST1Q9Y2H9 1570 aa21.26■□□□□ 0.99
NR1H3-211ENST00000441012 PLEKHH2Q8IVE3 1493 aa21.25■□□□□ 0.99
NR1H3-211ENST00000441012 ARHGEF12Q9NZN5 1544 aa21.23■□□□□ 0.99
NR1H3-211ENST00000441012 SAMD9LQ8IVG5 1584 aa21.23■□□□□ 0.99
NR1H3-211ENST00000441012 FOXD1Q16676 465 aa21.23■□□□□ 0.99
NR1H3-211ENST00000441012 HIRIP3Q9BW71 556 aaPredicted RBP21.23■□□□□ 0.99
NR1H3-211ENST00000441012 MLECQ14165 292 aa21.22■□□□□ 0.99
NR1H3-211ENST00000441012 DIP2CQ9Y2E4 1556 aa21.22■□□□□ 0.99
NR1H3-211ENST00000441012 SPATA31E1Q6ZUB1 1445 aa21.22■□□□□ 0.99
NR1H3-211ENST00000441012 ABCA6Q8N139 1617 aa21.21■□□□□ 0.99
NR1H3-211ENST00000441012 ABCC1P33527 1531 aa21.21■□□□□ 0.99
NR1H3-211ENST00000441012 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
NR1H3-211ENST00000441012 KIF15Q9NS87 1388 aa21.2■□□□□ 0.98
NR1H3-211ENST00000441012 WASHC2AQ641Q2 1341 aa21.2■□□□□ 0.98
NR1H3-211ENST00000441012 PKD2Q13563 968 aa21.18■□□□□ 0.98
NR1H3-211ENST00000441012 UHRF1BP1Q6BDS2 1440 aa21.18■□□□□ 0.98
NR1H3-211ENST00000441012 PREX1Q8TCU6 1659 aa21.18■□□□□ 0.98
NR1H3-211ENST00000441012 NBPF8Q3BBV2 869 aa21.18■□□□□ 0.98
NR1H3-211ENST00000441012 AFAP1Q8N556 730 aa21.18■□□□□ 0.98
NR1H3-211ENST00000441012 REREQ9P2R6 1566 aa21.18■□□□□ 0.98
NR1H3-211ENST00000441012 NUP155O75694 1391 aa21.17■□□□□ 0.98
NR1H3-211ENST00000441012 CNTLNQ9NXG0 1405 aa21.15■□□□□ 0.98
NR1H3-211ENST00000441012 KIDINS220Q9ULH0 1771 aa21.15■□□□□ 0.98
NR1H3-211ENST00000441012 CCDC7Q96M83 1385 aa21.15■□□□□ 0.98
NR1H3-211ENST00000441012 HNRNPMP52272 730 aaKnown RBP eCLIP21.15■□□□□ 0.98
NR1H3-211ENST00000441012 MLH3Q9UHC1 1453 aa21.14■□□□□ 0.97
NR1H3-211ENST00000441012 POLR1AO95602 1720 aaPredicted RBP21.14■□□□□ 0.97
NR1H3-211ENST00000441012 PLXNC1O60486 1568 aa21.14■□□□□ 0.97
NR1H3-211ENST00000441012 HSPA2P54652 639 aa21.14■□□□□ 0.97
NR1H3-211ENST00000441012 TRAPPC8Q9Y2L5 1435 aa21.13■□□□□ 0.97
NR1H3-211ENST00000441012 MYT1LQ9UL68 1186 aa21.11■□□□□ 0.97
NR1H3-211ENST00000441012 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
NR1H3-211ENST00000441012 C3P01024 1663 aa21.1■□□□□ 0.97
NR1H3-211ENST00000441012 UNC13BO14795 1591 aa21.09■□□□□ 0.97
NR1H3-211ENST00000441012 SYCP2Q9BX26 1530 aa21.09■□□□□ 0.97
NR1H3-211ENST00000441012 FBXO41Q8TF61 875 aa21.07■□□□□ 0.96
NR1H3-211ENST00000441012 RALGAPBQ86X10 1494 aa21.07■□□□□ 0.96
NR1H3-211ENST00000441012 AGLP35573 1532 aa21.07■□□□□ 0.96
NR1H3-211ENST00000441012 FAM135AQ9P2D6 1515 aa21.06■□□□□ 0.96
NR1H3-211ENST00000441012 CEBPAP49715 358 aaPredicted RBP21.05■□□□□ 0.96
NR1H3-211ENST00000441012 DUOX2Q9NRD8 1548 aa21.04■□□□□ 0.96
NR1H3-211ENST00000441012 SUPT16HQ9Y5B9 1047 aaKnown RBP21.04■□□□□ 0.96
NR1H3-211ENST00000441012 STRCQ7RTU9 1775 aa21.03■□□□□ 0.96
NR1H3-211ENST00000441012 ERBINQ96RT1 1412 aa21.03■□□□□ 0.96
NR1H3-211ENST00000441012 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
NR1H3-211ENST00000441012 IQGAP3Q86VI3 1631 aa21.01■□□□□ 0.95
NR1H3-211ENST00000441012 KIF7Q2M1P5 1343 aa21■□□□□ 0.95
NR1H3-211ENST00000441012 INO80Q9ULG1 1556 aaPredicted RBP20.99■□□□□ 0.95
NR1H3-211ENST00000441012 USP47Q96K76 1375 aa20.99■□□□□ 0.95
NR1H3-211ENST00000441012 RTEL1-TNFRSF6BF6WH68 1400 aa20.98■□□□□ 0.95
NR1H3-211ENST00000441012 MROH2AA6NES4 1674 aa20.98■□□□□ 0.95
NR1H3-211ENST00000441012 ATP7AQ04656 1500 aa20.98■□□□□ 0.95
NR1H3-211ENST00000441012 ROCK2O75116 1388 aaKnown RBP20.97■□□□□ 0.95
NR1H3-211ENST00000441012 PRKRIP1Q9H875 184 aaPredicted RBP20.96■□□□□ 0.95
NR1H3-211ENST00000441012 CLTCQ00610 1675 aaKnown RBP20.93■□□□□ 0.94
NR1H3-211ENST00000441012 CCDC144AA2RUR9 1427 aa20.93■□□□□ 0.94
NR1H3-211ENST00000441012 SPAG9O60271 1321 aaKnown RBP20.92■□□□□ 0.94
NR1H3-211ENST00000441012 ESF1Q9H501 851 aaKnown RBP20.91■□□□□ 0.94
NR1H3-211ENST00000441012 PLA2R1Q13018 1463 aa20.9■□□□□ 0.94
NR1H3-211ENST00000441012 LAMC1P11047 1609 aa20.88■□□□□ 0.93
NR1H3-211ENST00000441012 GPRASP1Q5JY77 1395 aa20.87■□□□□ 0.93
NR1H3-211ENST00000441012 PRAG1Q86YV5 1406 aa20.87■□□□□ 0.93
NR1H3-211ENST00000441012 A2MP01023 1474 aa20.87■□□□□ 0.93
NR1H3-211ENST00000441012 DHX29Q7Z478 1369 aaKnown RBP20.87■□□□□ 0.93
NR1H3-211ENST00000441012 CERKQ8TCT0 537 aa20.86■□□□□ 0.93
NR1H3-211ENST00000441012 CARD11Q9BXL7 1154 aa20.86■□□□□ 0.93
NR1H3-211ENST00000441012 DCAF11Q8TEB1 546 aa20.84■□□□□ 0.93
NR1H3-211ENST00000441012 TRPM1Q7Z4N2 1603 aa20.83■□□□□ 0.93
NR1H3-211ENST00000441012 KTN1Q86UP2 1357 aaKnown RBP20.83■□□□□ 0.93
NR1H3-211ENST00000441012 MYO3AQ8NEV4 1616 aa20.83■□□□□ 0.92
NR1H3-211ENST00000441012 ZNF142P52746 1687 aaPredicted RBP20.83■□□□□ 0.92
NR1H3-211ENST00000441012 STAC3Q96MF2 364 aa20.82■□□□□ 0.92
NR1H3-211ENST00000441012 NPATQ14207 1427 aa20.82■□□□□ 0.92
NR1H3-211ENST00000441012 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
NR1H3-211ENST00000441012 NEFLP07196 543 aa20.82■□□□□ 0.92
NR1H3-211ENST00000441012 DMRT2Q9Y5R5 561 aa20.82■□□□□ 0.92
NR1H3-211ENST00000441012 ZMYM3Q14202 1370 aa20.81■□□□□ 0.92
NR1H3-211ENST00000441012 ZNF326Q5BKZ1 582 aaKnown RBP20.81■□□□□ 0.92
NR1H3-211ENST00000441012 HNRNPUQ00839 825 aaKnown RBP eCLIP20.8■□□□□ 0.92
NR1H3-211ENST00000441012 DEPDC5O75140 1603 aa20.8■□□□□ 0.92
NR1H3-211ENST00000441012 PTPRTO14522 1441 aa20.79■□□□□ 0.92
NR1H3-211ENST00000441012 CAMSAP1Q5T5Y3 1602 aa20.79■□□□□ 0.92
NR1H3-211ENST00000441012 MRS2Q9HD23 443 aa20.76■□□□□ 0.91
NR1H3-211ENST00000441012 NEURL4Q96JN8 1562 aa20.76■□□□□ 0.91
NR1H3-211ENST00000441012 KDM2AQ9Y2K7 1162 aa20.75■□□□□ 0.91
NR1H3-211ENST00000441012 VWDEQ8N2E2 1590 aa20.75■□□□□ 0.91
NR1H3-211ENST00000441012 GGT6Q6P531 493 aa20.75■□□□□ 0.91
NR1H3-211ENST00000441012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.911e-6■■□□□ 11.6
NR1H3-211ENST00000441012 CEP170BQ9Y4F5 1589 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms