RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 MBD5Q9P267 1494 aa17.83■□□□□ 0.44
LINC02048-201ENST00000440556 USP47Q96K76 1375 aa17.82■□□□□ 0.44
LINC02048-201ENST00000440556 BECN1Q14457 450 aa17.81■□□□□ 0.44
LINC02048-201ENST00000440556 C8orf34Q49A92 452 aa17.81■□□□□ 0.44
LINC02048-201ENST00000440556 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
LINC02048-201ENST00000440556 ROCK1Q13464 1354 aa17.8■□□□□ 0.44
LINC02048-201ENST00000440556 E9PCH4 1651 aa17.8■□□□□ 0.44
LINC02048-201ENST00000440556 CRBNQ96SW2 442 aa17.8■□□□□ 0.44
LINC02048-201ENST00000440556 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
LINC02048-201ENST00000440556 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
LINC02048-201ENST00000440556 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
LINC02048-201ENST00000440556 NLRP13Q86W25 1043 aa17.76■□□□□ 0.43
LINC02048-201ENST00000440556 IQGAP2Q13576 1575 aa17.76■□□□□ 0.43
LINC02048-201ENST00000440556 GOLGA6L3A6NEY3 463 aa17.75■□□□□ 0.43
LINC02048-201ENST00000440556 TPM2P07951 284 aa17.74■□□□□ 0.43
LINC02048-201ENST00000440556 PODXL2Q9NZ53 605 aa17.74■□□□□ 0.43
LINC02048-201ENST00000440556 POGKQ9P215 609 aa17.74■□□□□ 0.43
LINC02048-201ENST00000440556 ISY1Q9ULR0 285 aaKnown RBP17.74■□□□□ 0.43
LINC02048-201ENST00000440556 FSD2A1L4K1 749 aa17.73■□□□□ 0.43
LINC02048-201ENST00000440556 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.73■□□□□ 0.43
LINC02048-201ENST00000440556 BLMP54132 1417 aaPredicted RBP17.73■□□□□ 0.43
LINC02048-201ENST00000440556 UHRF1BP1Q6BDS2 1440 aa17.72■□□□□ 0.43
LINC02048-201ENST00000440556 CHD1O14646 1710 aa17.72■□□□□ 0.43
LINC02048-201ENST00000440556 RALGAPBQ86X10 1494 aa17.71■□□□□ 0.43
LINC02048-201ENST00000440556 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
LINC02048-201ENST00000440556 PDCL3Q9H2J4 239 aa17.7■□□□□ 0.42
LINC02048-201ENST00000440556 PARD3Q8TEW0 1356 aa17.7■□□□□ 0.42
LINC02048-201ENST00000440556 CHIC2Q9UKJ5 165 aa17.69■□□□□ 0.42
LINC02048-201ENST00000440556 EIF3AQ14152 1382 aaKnown RBP17.68■□□□□ 0.42
LINC02048-201ENST00000440556 XRCC6P12956 609 aaKnown RBP eCLIP17.68■□□□□ 0.42
LINC02048-201ENST00000440556 MRE11P49959 708 aa17.68■□□□□ 0.42
LINC02048-201ENST00000440556 POLR3GLQ9BT43 218 aa17.67■□□□□ 0.42
LINC02048-201ENST00000440556 PLIN1O60240 522 aa17.66■□□□□ 0.42
LINC02048-201ENST00000440556 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
LINC02048-201ENST00000440556 NUP160Q12769 1436 aa17.66■□□□□ 0.42
LINC02048-201ENST00000440556 CALD1Q05682 793 aaKnown RBP17.66■□□□□ 0.42
LINC02048-201ENST00000440556 DNMT1P26358 1616 aaKnown RBP17.65■□□□□ 0.42
LINC02048-201ENST00000440556 ARHGEF12Q9NZN5 1544 aa17.65■□□□□ 0.42
LINC02048-201ENST00000440556 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
LINC02048-201ENST00000440556 FOXD1Q16676 465 aa17.64■□□□□ 0.41
LINC02048-201ENST00000440556 CDCA7LQ96GN5 454 aa17.63■□□□□ 0.41
LINC02048-201ENST00000440556 ZMYM3Q14202 1370 aa17.63■□□□□ 0.41
LINC02048-201ENST00000440556 ANTXR1Q9H6X2 564 aa17.63■□□□□ 0.41
LINC02048-201ENST00000440556 EPRSP07814 1512 aaKnown RBP17.63■□□□□ 0.41
LINC02048-201ENST00000440556 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
LINC02048-201ENST00000440556 CNGB1Q14028 1251 aaPredicted RBP17.62■□□□□ 0.41
LINC02048-201ENST00000440556 MAPK8IP3Q9UPT6 1336 aa17.62■□□□□ 0.41
LINC02048-201ENST00000440556 DAPK1P53355 1430 aa17.62■□□□□ 0.41
LINC02048-201ENST00000440556 KIAA1107Q9UPP5 1409 aa17.62■□□□□ 0.41
LINC02048-201ENST00000440556 KIAA0586Q9BVV6 1533 aa17.61■□□□□ 0.41
LINC02048-201ENST00000440556 SKAP1Q86WV1 359 aa17.61■□□□□ 0.41
LINC02048-201ENST00000440556 ESPNB1AK53 854 aa17.6■□□□□ 0.41
LINC02048-201ENST00000440556 USP19O94966 1318 aa17.6■□□□□ 0.41
LINC02048-201ENST00000440556 MAP7D2Q96T17 732 aa17.59■□□□□ 0.41
LINC02048-201ENST00000440556 PZPP20742 1482 aa17.59■□□□□ 0.41
LINC02048-201ENST00000440556 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.41
LINC02048-201ENST00000440556 TERF1P54274 439 aa17.58■□□□□ 0.41
LINC02048-201ENST00000440556 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.41
LINC02048-201ENST00000440556 JPH4Q96JJ6 628 aa17.58■□□□□ 0.4
LINC02048-201ENST00000440556 MCM4P33991 863 aa17.57■□□□□ 0.4
LINC02048-201ENST00000440556 UPF2Q9HAU5 1272 aaKnown RBP17.57■□□□□ 0.4
LINC02048-201ENST00000440556 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
LINC02048-201ENST00000440556 ADGBQ8N7X0 1667 aa17.56■□□□□ 0.4
LINC02048-201ENST00000440556 ITSN2Q9NZM3 1697 aa17.56■□□□□ 0.4
LINC02048-201ENST00000440556 C20orf194Q5TEA3 1177 aa17.56■□□□□ 0.4
LINC02048-201ENST00000440556 CARD11Q9BXL7 1154 aa17.56■□□□□ 0.4
LINC02048-201ENST00000440556 CLASP1Q7Z460 1538 aa17.55■□□□□ 0.4
LINC02048-201ENST00000440556 RGS3P49796 1198 aa17.55■□□□□ 0.4
LINC02048-201ENST00000440556 KIAA0556O60303 1618 aa17.54■□□□□ 0.4
LINC02048-201ENST00000440556 TRIM44Q96DX7 344 aaPredicted RBP17.53■□□□□ 0.4
LINC02048-201ENST00000440556 NLRP1Q9C000 1473 aa17.53■□□□□ 0.4
LINC02048-201ENST00000440556 ABCC5O15440 1437 aa17.53■□□□□ 0.4
LINC02048-201ENST00000440556 NINLQ9Y2I6 1382 aa17.52■□□□□ 0.4
LINC02048-201ENST00000440556 SLKQ9H2G2 1235 aaPredicted RBP17.52■□□□□ 0.4
LINC02048-201ENST00000440556 GRPEL1Q9HAV7 217 aa17.52■□□□□ 0.4
LINC02048-201ENST00000440556 DDX11L8A8MPP1 907 aa17.51■□□□□ 0.39
LINC02048-201ENST00000440556 PTMSP20962 102 aa17.51■□□□□ 0.39
LINC02048-201ENST00000440556 DISP1Q96F81 1524 aa17.51■□□□□ 0.39
LINC02048-201ENST00000440556 RAPGEF6Q8TEU7 1601 aa17.51■□□□□ 0.39
LINC02048-201ENST00000440556 AAMPQ13685 434 aa17.51■□□□□ 0.39
LINC02048-201ENST00000440556 CHMP5Q9NZZ3 219 aa17.51■□□□□ 0.39
LINC02048-201ENST00000440556 TRAK2O60296 914 aa17.5■□□□□ 0.39
LINC02048-201ENST00000440556 DUSP27Q5VZP5 1158 aa17.5■□□□□ 0.39
LINC02048-201ENST00000440556 ERCC6L2Q5T890 1561 aa17.5■□□□□ 0.39
LINC02048-201ENST00000440556 ADCY10Q96PN6 1610 aa17.49■□□□□ 0.39
LINC02048-201ENST00000440556 PANK2Q9BZ23 570 aa17.49■□□□□ 0.39
LINC02048-201ENST00000440556 PRG4Q92954 1404 aaPredicted RBP17.48■□□□□ 0.39
LINC02048-201ENST00000440556 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
LINC02048-201ENST00000440556 ST20-MTHFSA0A0A6YYL1 179 aa17.48■□□□□ 0.39
LINC02048-201ENST00000440556 PER1O15534 1290 aaPredicted RBP17.48■□□□□ 0.39
LINC02048-201ENST00000440556 MTERF4Q7Z6M4 381 aaKnown RBP17.48■□□□□ 0.39
LINC02048-201ENST00000440556 TBC1D32Q96NH3 1257 aa17.48■□□□□ 0.39
LINC02048-201ENST00000440556 CGNL1Q0VF96 1302 aa17.47■□□□□ 0.39
LINC02048-201ENST00000440556 ANKRD30AQ9BXX3 1397 aa17.47■□□□□ 0.39
LINC02048-201ENST00000440556 GOLGA2Q08379 1002 aa17.47■□□□□ 0.39
LINC02048-201ENST00000440556 ZNF326Q5BKZ1 582 aaKnown RBP17.47■□□□□ 0.39
LINC02048-201ENST00000440556 PRDM4Q9UKN5 801 aa17.47■□□□□ 0.39
LINC02048-201ENST00000440556 LAMC1P11047 1609 aa17.46■□□□□ 0.39
LINC02048-201ENST00000440556 ZNF521Q96K83 1311 aa17.45■□□□□ 0.38
LINC02048-201ENST00000440556 SKOR2Q2VWA4 1001 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms