RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 CHGAP10645 457 aaKnown RBP16.38■□□□□ 0.21
PCGF3-207ENST00000440452 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
PCGF3-207ENST00000440452 PANK3Q9H999 370 aa16.37■□□□□ 0.21
PCGF3-207ENST00000440452 PTPRGP23470 1445 aa16.37■□□□□ 0.21
PCGF3-207ENST00000440452 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
PCGF3-207ENST00000440452 GCC2Q8IWJ2 1684 aa16.36■□□□□ 0.21
PCGF3-207ENST00000440452 RAPGEF6Q8TEU7 1601 aa16.36■□□□□ 0.21
PCGF3-207ENST00000440452 MYBBP1AQ9BQG0 1328 aaKnown RBP16.35■□□□□ 0.21
PCGF3-207ENST00000440452 DHX29Q7Z478 1369 aaKnown RBP16.35■□□□□ 0.21
PCGF3-207ENST00000440452 SPATA31E1Q6ZUB1 1445 aa16.35■□□□□ 0.21
PCGF3-207ENST00000440452 KIF14Q15058 1648 aa16.34■□□□□ 0.21
PCGF3-207ENST00000440452 CCDC144AA2RUR9 1427 aa16.34■□□□□ 0.21
PCGF3-207ENST00000440452 KTN1Q86UP2 1357 aaKnown RBP16.33■□□□□ 0.2
PCGF3-207ENST00000440452 DNMT1P26358 1616 aaKnown RBP16.32■□□□□ 0.2
PCGF3-207ENST00000440452 RALBP1Q15311 655 aa16.32■□□□□ 0.2
PCGF3-207ENST00000440452 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
PCGF3-207ENST00000440452 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
PCGF3-207ENST00000440452 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCGF3-207ENST00000440452 PDE4AP27815 886 aa16.3■□□□□ 0.2
PCGF3-207ENST00000440452 RRP1P56182 461 aaKnown RBP16.3■□□□□ 0.2
PCGF3-207ENST00000440452 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
PCGF3-207ENST00000440452 TMF1P82094 1093 aa16.29■□□□□ 0.2
PCGF3-207ENST00000440452 GSE1Q14687 1217 aa16.29■□□□□ 0.2
PCGF3-207ENST00000440452 CCDC146Q8IYE0 955 aa16.29■□□□□ 0.2
PCGF3-207ENST00000440452 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
PCGF3-207ENST00000440452 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
PCGF3-207ENST00000440452 ATP10BO94823 1461 aa16.28■□□□□ 0.2
PCGF3-207ENST00000440452 UBE2Q2Q8WVN8 375 aa16.27■□□□□ 0.2
PCGF3-207ENST00000440452 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
PCGF3-207ENST00000440452 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
PCGF3-207ENST00000440452 SMG6Q86US8 1419 aaKnown RBP16.27■□□□□ 0.19
PCGF3-207ENST00000440452 AFAP1Q8N556 730 aa16.26■□□□□ 0.19
PCGF3-207ENST00000440452 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
PCGF3-207ENST00000440452 FRAT1Q92837 279 aaPredicted RBP16.24■□□□□ 0.19
PCGF3-207ENST00000440452 GLIPR1L2Q4G1C9 344 aa16.24■□□□□ 0.19
PCGF3-207ENST00000440452 ADAMTS8Q9UP79 889 aa16.23■□□□□ 0.19
PCGF3-207ENST00000440452 CEP170Q5SW79 1584 aa16.23■□□□□ 0.19
PCGF3-207ENST00000440452 CRBNQ96SW2 442 aa16.23■□□□□ 0.19
PCGF3-207ENST00000440452 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
PCGF3-207ENST00000440452 NAP1L5Q96NT1 182 aaPredicted RBP16.22■□□□□ 0.19
PCGF3-207ENST00000440452 RGS3P49796 1198 aa16.22■□□□□ 0.19
PCGF3-207ENST00000440452 USP35Q9P2H5 1018 aa16.22■□□□□ 0.19
PCGF3-207ENST00000440452 NFKBIBQ15653 356 aa16.21■□□□□ 0.19
PCGF3-207ENST00000440452 BCORL1Q5H9F3 1711 aa16.2■□□□□ 0.18
PCGF3-207ENST00000440452 TCERG1O14776 1098 aaKnown RBP16.2■□□□□ 0.18
PCGF3-207ENST00000440452 DISP3Q9P2K9 1392 aa16.2■□□□□ 0.18
PCGF3-207ENST00000440452 ARHGAP5Q13017 1502 aa16.2■□□□□ 0.18
PCGF3-207ENST00000440452 VSIG10Q8N0Z9 540 aa16.2■□□□□ 0.18
PCGF3-207ENST00000440452 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
PCGF3-207ENST00000440452 KIF3BO15066 747 aa16.19■□□□□ 0.18
PCGF3-207ENST00000440452 NUTM2DQ5VT03 806 aaPredicted RBP16.19■□□□□ 0.18
PCGF3-207ENST00000440452 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
PCGF3-207ENST00000440452 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
PCGF3-207ENST00000440452 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
PCGF3-207ENST00000440452 PKNOX2Q96KN3 472 aa16.17■□□□□ 0.18
PCGF3-207ENST00000440452 PLEKHH2Q8IVE3 1493 aa16.17■□□□□ 0.18
PCGF3-207ENST00000440452 SPAG9O60271 1321 aaKnown RBP16.15■□□□□ 0.18
PCGF3-207ENST00000440452 RSPH4AQ5TD94 716 aa16.15■□□□□ 0.18
PCGF3-207ENST00000440452 SAFB2Q14151 953 aaKnown RBP eCLIP16.15■□□□□ 0.184e-6■■■□□ 19
PCGF3-207ENST00000440452 RALGAPBQ86X10 1494 aa16.14■□□□□ 0.17
PCGF3-207ENST00000440452 PER1O15534 1290 aaPredicted RBP16.13■□□□□ 0.17
PCGF3-207ENST00000440452 CCDC141Q6ZP82 1450 aa16.13■□□□□ 0.17
PCGF3-207ENST00000440452 TESK2Q96S53 571 aa16.13■□□□□ 0.17
PCGF3-207ENST00000440452 ITSN2Q9NZM3 1697 aa16.12■□□□□ 0.17
PCGF3-207ENST00000440452 APAF1O14727 1248 aa16.12■□□□□ 0.17
PCGF3-207ENST00000440452 FRAT2O75474 233 aaPredicted RBP16.12■□□□□ 0.17
PCGF3-207ENST00000440452 CFAP70Q5T0N1 1121 aa16.12■□□□□ 0.17
PCGF3-207ENST00000440452 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
PCGF3-207ENST00000440452 GGT6Q6P531 493 aa16.11■□□□□ 0.17
PCGF3-207ENST00000440452 SLKQ9H2G2 1235 aaPredicted RBP16.11■□□□□ 0.17
PCGF3-207ENST00000440452 ADGRL2O95490 1459 aa16.11■□□□□ 0.17
PCGF3-207ENST00000440452 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
PCGF3-207ENST00000440452 SYCP2Q9BX26 1530 aa16.1■□□□□ 0.17
PCGF3-207ENST00000440452 KDM5CP41229 1560 aa16.1■□□□□ 0.17
PCGF3-207ENST00000440452 RSPH6AQ9H0K4 717 aa16.1■□□□□ 0.17
PCGF3-207ENST00000440452 BACH2Q9BYV9 841 aa16.09■□□□□ 0.17
PCGF3-207ENST00000440452 FAM135AQ9P2D6 1515 aa16.09■□□□□ 0.17
PCGF3-207ENST00000440452 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
PCGF3-207ENST00000440452 TRAK1Q9UPV9 953 aa16.09■□□□□ 0.17
PCGF3-207ENST00000440452 PDE3BQ13370 1112 aa16.09■□□□□ 0.17
PCGF3-207ENST00000440452 PRAG1Q86YV5 1406 aa16.09■□□□□ 0.17
PCGF3-207ENST00000440452 ERBINQ96RT1 1412 aa16.09■□□□□ 0.17
PCGF3-207ENST00000440452 NUP160Q12769 1436 aa16.08■□□□□ 0.16
PCGF3-207ENST00000440452 GZF1Q9H116 711 aaPredicted RBP16.08■□□□□ 0.16
PCGF3-207ENST00000440452 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
PCGF3-207ENST00000440452 ABCC10Q5T3U5 1492 aa16.07■□□□□ 0.16
PCGF3-207ENST00000440452 SPRYD3Q8NCJ5 442 aa16.07■□□□□ 0.16
PCGF3-207ENST00000440452 BCL2L13Q9BXK5 485 aa16.06■□□□□ 0.16
PCGF3-207ENST00000440452 UHRF1BP1Q6BDS2 1440 aa16.06■□□□□ 0.16
PCGF3-207ENST00000440452 LRPPRCP42704 1394 aaKnown RBP16.05■□□□□ 0.16
PCGF3-207ENST00000440452 RNF123Q5XPI4 1314 aa16.04■□□□□ 0.16
PCGF3-207ENST00000440452 CDCA8Q53HL2 280 aa16.04■□□□□ 0.16
PCGF3-207ENST00000440452 BCAR3O75815 825 aa16.04■□□□□ 0.16
PCGF3-207ENST00000440452 TMEM132EQ6IEE7 984 aa16.04■□□□□ 0.16
PCGF3-207ENST00000440452 PARD3Q8TEW0 1356 aa16.04■□□□□ 0.16
PCGF3-207ENST00000440452 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.04■□□□□ 0.16
PCGF3-207ENST00000440452 A2MP01023 1474 aa16.03■□□□□ 0.16
PCGF3-207ENST00000440452 ADGBQ8N7X0 1667 aa16.03■□□□□ 0.16
PCGF3-207ENST00000440452 CLUAP1Q96AJ1 413 aa16.02■□□□□ 0.15
PCGF3-207ENST00000440452 CDC42BPAQ5VT25 1732 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms