RNA–Protein interactions for RNA: ENST00000440093.6

SOX9-AS1-205, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 468 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-205ENST00000440093 CDC42BPBQ9Y5S2 1711 aa8.34□□□□□ -1.07
SOX9-AS1-205ENST00000440093 AGLP35573 1532 aa8.34□□□□□ -1.07
SOX9-AS1-205ENST00000440093 TCOF1Q13428 1488 aaKnown RBP8.34□□□□□ -1.07
SOX9-AS1-205ENST00000440093 GABBR2O75899 941 aa8.34□□□□□ -1.07
SOX9-AS1-205ENST00000440093 KIDINS220Q9ULH0 1771 aa8.34□□□□□ -1.07
SOX9-AS1-205ENST00000440093 TRAPPC8Q9Y2L5 1435 aa8.34□□□□□ -1.07
SOX9-AS1-205ENST00000440093 CEP170BQ9Y4F5 1589 aaPredicted RBP8.34□□□□□ -1.07
SOX9-AS1-205ENST00000440093 SRCAPQ6ZRS2 3230 aa8.34□□□□□ -1.07
SOX9-AS1-205ENST00000440093 ABCC1P33527 1531 aa8.34□□□□□ -1.08
SOX9-AS1-205ENST00000440093 CLTCQ00610 1675 aaKnown RBP8.34□□□□□ -1.08
SOX9-AS1-205ENST00000440093 HSPA1LP34931 641 aa8.33□□□□□ -1.08
SOX9-AS1-205ENST00000440093 NEURL4Q96JN8 1562 aa8.33□□□□□ -1.08
SOX9-AS1-205ENST00000440093 ARHGAP5Q13017 1502 aa8.33□□□□□ -1.08
SOX9-AS1-205ENST00000440093 NCKAP5LQ9HCH0 1330 aa8.32□□□□□ -1.08
SOX9-AS1-205ENST00000440093 POLR1AO95602 1720 aaPredicted RBP8.32□□□□□ -1.08
SOX9-AS1-205ENST00000440093 FARP1Q9Y4F1 1045 aaPredicted RBP8.32□□□□□ -1.08
SOX9-AS1-205ENST00000440093 PREX2Q70Z35 1606 aa8.32□□□□□ -1.08
SOX9-AS1-205ENST00000440093 PLA2R1Q13018 1463 aa8.32□□□□□ -1.08
SOX9-AS1-205ENST00000440093 SETD1AO15047 1707 aaKnown RBP8.32□□□□□ -1.08
SOX9-AS1-205ENST00000440093 PLEKHD1A6NEE1 506 aa8.31□□□□□ -1.08
SOX9-AS1-205ENST00000440093 RANGAP1P46060 587 aaPredicted RBP8.31□□□□□ -1.08
SOX9-AS1-205ENST00000440093 AFAP1Q8N556 730 aa8.3□□□□□ -1.08
SOX9-AS1-205ENST00000440093 MLH3Q9UHC1 1453 aa8.3□□□□□ -1.08
SOX9-AS1-205ENST00000440093 NPATQ14207 1427 aa8.29□□□□□ -1.08
SOX9-AS1-205ENST00000440093 SPDYE4A6NLX3 237 aa8.29□□□□□ -1.08
SOX9-AS1-205ENST00000440093 PLXNC1O60486 1568 aa8.28□□□□□ -1.08
SOX9-AS1-205ENST00000440093 VWDEQ8N2E2 1590 aa8.28□□□□□ -1.08
SOX9-AS1-205ENST00000440093 PIP4K2BP78356 416 aa8.28□□□□□ -1.08
SOX9-AS1-205ENST00000440093 DNMT1P26358 1616 aaKnown RBP8.28□□□□□ -1.08
SOX9-AS1-205ENST00000440093 CNTLNQ9NXG0 1405 aa8.28□□□□□ -1.08
SOX9-AS1-205ENST00000440093 STRCP1A6NGW2 1772 aa8.27□□□□□ -1.08
SOX9-AS1-205ENST00000440093 CDC42BPAQ5VT25 1732 aa8.27□□□□□ -1.09
SOX9-AS1-205ENST00000440093 CD44P16070 742 aaKnown RBP8.27□□□□□ -1.09
SOX9-AS1-205ENST00000440093 SAMD9LQ8IVG5 1584 aa8.27□□□□□ -1.09
SOX9-AS1-205ENST00000440093 CPS1P31327 1500 aa8.26□□□□□ -1.09
SOX9-AS1-205ENST00000440093 PTPRKQ15262 1439 aa8.26□□□□□ -1.09
SOX9-AS1-205ENST00000440093 INO80Q9ULG1 1556 aaPredicted RBP8.26□□□□□ -1.09
SOX9-AS1-205ENST00000440093 RNF17Q9BXT8 1623 aaKnown RBP8.25□□□□□ -1.09
SOX9-AS1-205ENST00000440093 SYCP2Q9BX26 1530 aa8.25□□□□□ -1.09
SOX9-AS1-205ENST00000440093 CREBZFQ9NS37 354 aa8.25□□□□□ -1.09
SOX9-AS1-205ENST00000440093 TROQ12816 1431 aaPredicted RBP8.24□□□□□ -1.09
SOX9-AS1-205ENST00000440093 EFCAB2Q5VUJ9 269 aa8.24□□□□□ -1.09
SOX9-AS1-205ENST00000440093 FAM9AQ8IZU1 332 aaPredicted RBP8.24□□□□□ -1.09
SOX9-AS1-205ENST00000440093 RGS17Q9UGC6 210 aaPredicted RBP8.24□□□□□ -1.09
SOX9-AS1-205ENST00000440093 SHANK2Q9UPX8 1470 aa8.24□□□□□ -1.09
SOX9-AS1-205ENST00000440093 ZMYM3Q14202 1370 aa8.23□□□□□ -1.09
SOX9-AS1-205ENST00000440093 MYT1LQ9UL68 1186 aa8.23□□□□□ -1.09
SOX9-AS1-205ENST00000440093 A2ML1A8K2U0 1454 aa8.23□□□□□ -1.09
SOX9-AS1-205ENST00000440093 ATP7AQ04656 1500 aa8.23□□□□□ -1.09
SOX9-AS1-205ENST00000440093 SYNMO15061 1565 aa8.22□□□□□ -1.09
SOX9-AS1-205ENST00000440093 STAG3Q9UJ98 1225 aa8.22□□□□□ -1.09
SOX9-AS1-205ENST00000440093 ESF1Q9H501 851 aaKnown RBP8.21□□□□□ -1.1
SOX9-AS1-205ENST00000440093 IQGAP1P46940 1657 aa8.21□□□□□ -1.1
SOX9-AS1-205ENST00000440093 XIRP1Q702N8 1843 aaKnown RBP8.2□□□□□ -1.1
SOX9-AS1-205ENST00000440093 PKD2Q13563 968 aa8.2□□□□□ -1.1
SOX9-AS1-205ENST00000440093 ARHGAP35Q9NRY4 1499 aa8.19□□□□□ -1.1
SOX9-AS1-205ENST00000440093 POTEIP0CG38 1075 aa8.19□□□□□ -1.1
SOX9-AS1-205ENST00000440093 CLIP1P30622 1438 aa8.19□□□□□ -1.1
SOX9-AS1-205ENST00000440093 LRRC7Q96NW7 1537 aa8.19□□□□□ -1.1
SOX9-AS1-205ENST00000440093 DEPDC5O75140 1603 aa8.18□□□□□ -1.1
SOX9-AS1-205ENST00000440093 ZC3H13Q5T200 1668 aaKnown RBP8.18□□□□□ -1.1
SOX9-AS1-205ENST00000440093 ADGBQ8N7X0 1667 aa8.18□□□□□ -1.1
SOX9-AS1-205ENST00000440093 LOC105371045A0A1W2PR82 267 aa8.17□□□□□ -1.1
SOX9-AS1-205ENST00000440093 TOM1O60784 492 aa8.17□□□□□ -1.1
SOX9-AS1-205ENST00000440093 FMN1Q68DA7 1419 aa8.17□□□□□ -1.1
SOX9-AS1-205ENST00000440093 A2MP01023 1474 aa8.17□□□□□ -1.1
SOX9-AS1-205ENST00000440093 POTEAQ6S8J7 498 aa8.16□□□□□ -1.1
SOX9-AS1-205ENST00000440093 ZRANB1Q9UGI0 708 aa8.16□□□□□ -1.1
SOX9-AS1-205ENST00000440093 MED14O60244 1454 aa8.15□□□□□ -1.1
SOX9-AS1-205ENST00000440093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.15□□□□□ -1.1
SOX9-AS1-205ENST00000440093 ATP1B4Q9UN42 357 aaPredicted RBP8.15□□□□□ -1.1
SOX9-AS1-205ENST00000440093 NPHP4O75161 1426 aaPredicted RBP8.14□□□□□ -1.11
SOX9-AS1-205ENST00000440093 LHX8Q68G74 356 aa8.14□□□□□ -1.11
SOX9-AS1-205ENST00000440093 KDM5DQ9BY66 1539 aa8.13□□□□□ -1.11
SOX9-AS1-205ENST00000440093 PZPP20742 1482 aa8.13□□□□□ -1.11
SOX9-AS1-205ENST00000440093 TNRQ92752 1358 aa8.13□□□□□ -1.11
SOX9-AS1-205ENST00000440093 UGGT1Q9NYU2 1555 aa8.13□□□□□ -1.11
SOX9-AS1-205ENST00000440093 ROBO1Q9Y6N7 1651 aa8.12□□□□□ -1.11
SOX9-AS1-205ENST00000440093 ZNF579Q8NAF0 562 aaKnown RBP8.12□□□□□ -1.11
SOX9-AS1-205ENST00000440093 GPATCH8Q9UKJ3 1502 aaKnown RBP8.12□□□□□ -1.11
SOX9-AS1-205ENST00000440093 SPAG9O60271 1321 aaKnown RBP8.11□□□□□ -1.11
SOX9-AS1-205ENST00000440093 MNX1P50219 401 aaPredicted RBP8.11□□□□□ -1.11
SOX9-AS1-205ENST00000440093 FBXO31Q5XUX0 539 aaPredicted RBP8.11□□□□□ -1.11
SOX9-AS1-205ENST00000440093 GGT6Q6P531 493 aa8.11□□□□□ -1.11
SOX9-AS1-205ENST00000440093 CCDC18Q5T9S5 1454 aa8.11□□□□□ -1.11
SOX9-AS1-205ENST00000440093 CDK11AQ9UQ88 783 aaPredicted RBP8.1□□□□□ -1.11
SOX9-AS1-205ENST00000440093 UBR1Q8IWV7 1749 aa8.09□□□□□ -1.11
SOX9-AS1-205ENST00000440093 MAP3K1Q13233 1512 aa8.09□□□□□ -1.11
SOX9-AS1-205ENST00000440093 HNRNPMP52272 730 aaKnown RBP eCLIP8.09□□□□□ -1.11
SOX9-AS1-205ENST00000440093 ZNF777Q9ULD5 760 aaPredicted RBP8.09□□□□□ -1.11
SOX9-AS1-205ENST00000440093 CEP162Q5TB80 1403 aa8.09□□□□□ -1.11
SOX9-AS1-205ENST00000440093 TIAM1Q13009 1591 aa8.09□□□□□ -1.11
SOX9-AS1-205ENST00000440093 NLRP1Q9C000 1473 aa8.08□□□□□ -1.12
SOX9-AS1-205ENST00000440093 CLCN6P51797 869 aa8.08□□□□□ -1.12
SOX9-AS1-205ENST00000440093 CASKIN1Q8WXD9 1431 aa8.08□□□□□ -1.12
SOX9-AS1-205ENST00000440093 FAM135AQ9P2D6 1515 aa8.08□□□□□ -1.12
SOX9-AS1-205ENST00000440093 LRP6O75581 1613 aa8.07□□□□□ -1.12
SOX9-AS1-205ENST00000440093 KIAA1107Q9UPP5 1409 aa8.07□□□□□ -1.12
SOX9-AS1-205ENST00000440093 GALR2O43603 387 aaPredicted RBP8.07□□□□□ -1.12
SOX9-AS1-205ENST00000440093 PROM2Q8N271 834 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms