RNA–Protein interactions for RNA: ENST00000440014.6

PDE4A-204, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-204ENST00000440014 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
PDE4A-204ENST00000440014 BCORL1Q5H9F3 1711 aa17.69■□□□□ 0.42
PDE4A-204ENST00000440014 CD109Q6YHK3 1445 aa17.69■□□□□ 0.42
PDE4A-204ENST00000440014 RTN4Q9NQC3 1192 aaKnown RBP17.69■□□□□ 0.42
PDE4A-204ENST00000440014 TTC37Q6PGP7 1564 aa17.68■□□□□ 0.42
PDE4A-204ENST00000440014 ARID4BQ4LE39 1312 aaPredicted RBP17.68■□□□□ 0.42
PDE4A-204ENST00000440014 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
PDE4A-204ENST00000440014 MBD5Q9P267 1494 aa17.67■□□□□ 0.42
PDE4A-204ENST00000440014 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
PDE4A-204ENST00000440014 DNMT1P26358 1616 aaKnown RBP17.66■□□□□ 0.42
PDE4A-204ENST00000440014 ABCC5O15440 1437 aa17.66■□□□□ 0.42
PDE4A-204ENST00000440014 USP35Q9P2H5 1018 aa17.65■□□□□ 0.42
PDE4A-204ENST00000440014 ROCK2O75116 1388 aaKnown RBP17.64■□□□□ 0.41
PDE4A-204ENST00000440014 NEFMP07197 916 aa17.64■□□□□ 0.41
PDE4A-204ENST00000440014 ZNF326Q5BKZ1 582 aaKnown RBP17.64■□□□□ 0.41
PDE4A-204ENST00000440014 EXOC6Q8TAG9 804 aa17.63■□□□□ 0.41
PDE4A-204ENST00000440014 LAS1LQ9Y4W2 734 aaKnown RBP17.63■□□□□ 0.41
PDE4A-204ENST00000440014 LRPPRCP42704 1394 aaKnown RBP17.63■□□□□ 0.41
PDE4A-204ENST00000440014 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
PDE4A-204ENST00000440014 PDE4AP27815 886 aa17.63■□□□□ 0.41
PDE4A-204ENST00000440014 KDM5CP41229 1560 aa17.63■□□□□ 0.41
PDE4A-204ENST00000440014 PLCH2O75038 1416 aa17.63■□□□□ 0.41
PDE4A-204ENST00000440014 PZPP20742 1482 aa17.62■□□□□ 0.41
PDE4A-204ENST00000440014 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.61■□□□□ 0.41
PDE4A-204ENST00000440014 KIF15Q9NS87 1388 aa17.61■□□□□ 0.41
PDE4A-204ENST00000440014 ARAP3Q8WWN8 1544 aa17.61■□□□□ 0.41
PDE4A-204ENST00000440014 TSPOAP1O95153 1857 aa17.61■□□□□ 0.41
PDE4A-204ENST00000440014 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
PDE4A-204ENST00000440014 MS4A1P11836 297 aa17.6■□□□□ 0.41
PDE4A-204ENST00000440014 BACH2Q9BYV9 841 aa17.6■□□□□ 0.41
PDE4A-204ENST00000440014 RCAN3Q9UKA8 241 aa17.6■□□□□ 0.41
PDE4A-204ENST00000440014 MYO5CQ9NQX4 1742 aa17.6■□□□□ 0.41
PDE4A-204ENST00000440014 GPATCH8Q9UKJ3 1502 aaKnown RBP17.59■□□□□ 0.41
PDE4A-204ENST00000440014 ZNF644Q9H582 1327 aaPredicted RBP17.59■□□□□ 0.41
PDE4A-204ENST00000440014 PPM1GO15355 546 aaPredicted RBP17.58■□□□□ 0.41
PDE4A-204ENST00000440014 PREX2Q70Z35 1606 aa17.58■□□□□ 0.4
PDE4A-204ENST00000440014 MYBBP1AQ9BQG0 1328 aaKnown RBP17.58■□□□□ 0.4
PDE4A-204ENST00000440014 KIAA1107Q9UPP5 1409 aa17.58■□□□□ 0.4
PDE4A-204ENST00000440014 CDC42BPAQ5VT25 1732 aa17.57■□□□□ 0.4
PDE4A-204ENST00000440014 KTN1Q86UP2 1357 aaKnown RBP17.56■□□□□ 0.4
PDE4A-204ENST00000440014 FANCAO15360 1455 aa17.56■□□□□ 0.4
PDE4A-204ENST00000440014 NEO1Q92859 1461 aa17.56■□□□□ 0.4
PDE4A-204ENST00000440014 RALBP1Q15311 655 aa17.55■□□□□ 0.4
PDE4A-204ENST00000440014 EFCAB2Q5VUJ9 269 aa17.55■□□□□ 0.4
PDE4A-204ENST00000440014 ARHGAP5Q13017 1502 aa17.55■□□□□ 0.4
PDE4A-204ENST00000440014 CDC42BPBQ9Y5S2 1711 aa17.55■□□□□ 0.4
PDE4A-204ENST00000440014 WASHC2CQ9Y4E1 1318 aa17.55■□□□□ 0.4
PDE4A-204ENST00000440014 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
PDE4A-204ENST00000440014 CFAP74Q9C0B2 1584 aa17.54■□□□□ 0.4
PDE4A-204ENST00000440014 RALGAPBQ86X10 1494 aa17.54■□□□□ 0.4
PDE4A-204ENST00000440014 CFDP1Q9UEE9 299 aaPredicted RBP17.53■□□□□ 0.4
PDE4A-204ENST00000440014 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
PDE4A-204ENST00000440014 CARD11Q9BXL7 1154 aa17.52■□□□□ 0.4
PDE4A-204ENST00000440014 UHRF1BP1Q6BDS2 1440 aa17.52■□□□□ 0.4
PDE4A-204ENST00000440014 PKD2Q13563 968 aa17.52■□□□□ 0.39
PDE4A-204ENST00000440014 DDRGK1Q96HY6 314 aa17.5■□□□□ 0.39
PDE4A-204ENST00000440014 UBE2Q2Q8WVN8 375 aa17.5■□□□□ 0.39
PDE4A-204ENST00000440014 ADGBQ8N7X0 1667 aa17.48■□□□□ 0.39
PDE4A-204ENST00000440014 ADGRL1O94910 1474 aa17.47■□□□□ 0.39
PDE4A-204ENST00000440014 CAMSAP2Q08AD1 1489 aa17.47■□□□□ 0.39
PDE4A-204ENST00000440014 ST20-MTHFSA0A0A6YYL1 179 aa17.47■□□□□ 0.39
PDE4A-204ENST00000440014 SAMD9LQ8IVG5 1584 aa17.47■□□□□ 0.39
PDE4A-204ENST00000440014 NLRP13Q86W25 1043 aa17.46■□□□□ 0.39
PDE4A-204ENST00000440014 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
PDE4A-204ENST00000440014 E9PCH4 1651 aa17.46■□□□□ 0.39
PDE4A-204ENST00000440014 COL17A1Q9UMD9 1497 aaPredicted RBP17.46■□□□□ 0.39
PDE4A-204ENST00000440014 ABCC1P33527 1531 aa17.45■□□□□ 0.38
PDE4A-204ENST00000440014 ARHGEF12Q9NZN5 1544 aa17.45■□□□□ 0.38
PDE4A-204ENST00000440014 PLEKHH2Q8IVE3 1493 aa17.45■□□□□ 0.38
PDE4A-204ENST00000440014 SCAPERQ9BY12 1400 aa17.45■□□□□ 0.38
PDE4A-204ENST00000440014 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
PDE4A-204ENST00000440014 GSE1Q14687 1217 aa17.43■□□□□ 0.38
PDE4A-204ENST00000440014 CDCA7LQ96GN5 454 aa17.43■□□□□ 0.38
PDE4A-204ENST00000440014 PARD3Q8TEW0 1356 aa17.43■□□□□ 0.38
PDE4A-204ENST00000440014 PLIN1O60240 522 aa17.42■□□□□ 0.38
PDE4A-204ENST00000440014 CRBNQ96SW2 442 aa17.41■□□□□ 0.38
PDE4A-204ENST00000440014 ANKRD30AQ9BXX3 1397 aa17.41■□□□□ 0.38
PDE4A-204ENST00000440014 SKAP1Q86WV1 359 aa17.41■□□□□ 0.38
PDE4A-204ENST00000440014 KDM2AQ9Y2K7 1162 aa17.41■□□□□ 0.38
PDE4A-204ENST00000440014 SYCP2Q9BX26 1530 aa17.4■□□□□ 0.38
PDE4A-204ENST00000440014 POGZQ7Z3K3 1410 aa17.4■□□□□ 0.38
PDE4A-204ENST00000440014 BRPF3Q9ULD4 1205 aa17.4■□□□□ 0.38
PDE4A-204ENST00000440014 CROCC2H7BZ55 1655 aa17.4■□□□□ 0.38
PDE4A-204ENST00000440014 RAPGEF3O95398 923 aa17.4■□□□□ 0.38
PDE4A-204ENST00000440014 NFKBIBQ15653 356 aa17.4■□□□□ 0.38
PDE4A-204ENST00000440014 ANKRD50Q9ULJ7 1429 aa17.4■□□□□ 0.38
PDE4A-204ENST00000440014 HNRNPMP52272 730 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDE4A-204ENST00000440014 FRMPD1Q5SYB0 1578 aa17.39■□□□□ 0.37
PDE4A-204ENST00000440014 TRAPPC8Q9Y2L5 1435 aa17.38■□□□□ 0.37
PDE4A-204ENST00000440014 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
PDE4A-204ENST00000440014 RICTORQ6R327 1708 aa17.38■□□□□ 0.37
PDE4A-204ENST00000440014 DAXXQ9UER7 740 aaPredicted RBP17.37■□□□□ 0.37
PDE4A-204ENST00000440014 NUP155O75694 1391 aa17.37■□□□□ 0.37
PDE4A-204ENST00000440014 AFAP1Q8N556 730 aa17.36■□□□□ 0.37
PDE4A-204ENST00000440014 DCAF11Q8TEB1 546 aa17.36■□□□□ 0.37
PDE4A-204ENST00000440014 RSPH4AQ5TD94 716 aa17.36■□□□□ 0.37
PDE4A-204ENST00000440014 BLMP54132 1417 aaPredicted RBP17.35■□□□□ 0.37
PDE4A-204ENST00000440014 ARHGEF5Q12774 1597 aa17.35■□□□□ 0.37
PDE4A-204ENST00000440014 INSRP06213 1382 aa17.35■□□□□ 0.37
PDE4A-204ENST00000440014 SLC4A3P48751 1232 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms