RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 KIF14Q15058 1648 aa11.73□□□□□ -0.53
COPS3-203ENST00000439936 COL17A1Q9UMD9 1497 aaPredicted RBP11.73□□□□□ -0.53
COPS3-203ENST00000439936 TTC37Q6PGP7 1564 aa11.73□□□□□ -0.53
COPS3-203ENST00000439936 POTEFA5A3E0 1075 aa11.72□□□□□ -0.53
COPS3-203ENST00000439936 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
COPS3-203ENST00000439936 PLCH2O75038 1416 aa11.71□□□□□ -0.53
COPS3-203ENST00000439936 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.53
COPS3-203ENST00000439936 EFCAB2Q5VUJ9 269 aa11.71□□□□□ -0.53
COPS3-203ENST00000439936 KDM6BO15054 1643 aa11.71□□□□□ -0.54
COPS3-203ENST00000439936 PHLDB1Q86UU1 1377 aa11.7□□□□□ -0.54
COPS3-203ENST00000439936 TIAM1Q13009 1591 aa11.7□□□□□ -0.54
COPS3-203ENST00000439936 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
COPS3-203ENST00000439936 RAPGEF3O95398 923 aa11.68□□□□□ -0.54
COPS3-203ENST00000439936 MAP3K1Q13233 1512 aa11.68□□□□□ -0.54
COPS3-203ENST00000439936 AKNAQ7Z591 1439 aa11.68□□□□□ -0.54
COPS3-203ENST00000439936 MYO5CQ9NQX4 1742 aa11.68□□□□□ -0.54
COPS3-203ENST00000439936 FANCAO15360 1455 aa11.68□□□□□ -0.54
COPS3-203ENST00000439936 NEO1Q92859 1461 aa11.68□□□□□ -0.54
COPS3-203ENST00000439936 ARAP3Q8WWN8 1544 aa11.68□□□□□ -0.54
COPS3-203ENST00000439936 CDC42BPBQ9Y5S2 1711 aa11.67□□□□□ -0.54
COPS3-203ENST00000439936 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
COPS3-203ENST00000439936 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
COPS3-203ENST00000439936 LRRC9Q6ZRR7 1453 aa11.66□□□□□ -0.54
COPS3-203ENST00000439936 CCNB3Q8WWL7 1395 aa11.66□□□□□ -0.54
COPS3-203ENST00000439936 CDC42BPAQ5VT25 1732 aa11.66□□□□□ -0.54
COPS3-203ENST00000439936 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
COPS3-203ENST00000439936 ZNF777Q9ULD5 760 aaPredicted RBP11.66□□□□□ -0.54
COPS3-203ENST00000439936 EHBP1L1Q8N3D4 1523 aa11.65□□□□□ -0.54
COPS3-203ENST00000439936 GPATCH8Q9UKJ3 1502 aaKnown RBP11.65□□□□□ -0.54
COPS3-203ENST00000439936 CFDP1Q9UEE9 299 aaPredicted RBP11.65□□□□□ -0.55
COPS3-203ENST00000439936 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.55
COPS3-203ENST00000439936 SCAPERQ9BY12 1400 aa11.64□□□□□ -0.55
COPS3-203ENST00000439936 ARHGAP5Q13017 1502 aa11.64□□□□□ -0.55
COPS3-203ENST00000439936 SUPT6HQ7KZ85 1726 aaKnown RBP11.63□□□□□ -0.55
COPS3-203ENST00000439936 NCOA2Q15596 1464 aa11.63□□□□□ -0.55
COPS3-203ENST00000439936 COLQQ9Y215 455 aaPredicted RBP11.63□□□□□ -0.55
COPS3-203ENST00000439936 DENND4BO75064 1496 aaPredicted RBP11.62□□□□□ -0.55
COPS3-203ENST00000439936 CFAP74Q9C0B2 1584 aa11.62□□□□□ -0.55
COPS3-203ENST00000439936 PREX2Q70Z35 1606 aa11.62□□□□□ -0.55
COPS3-203ENST00000439936 HNRNPMP52272 730 aaKnown RBP eCLIP11.62□□□□□ -0.55
COPS3-203ENST00000439936 AMER1Q5JTC6 1135 aaPredicted RBP11.62□□□□□ -0.55
COPS3-203ENST00000439936 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
COPS3-203ENST00000439936 IFNL1Q8IU54 200 aa11.61□□□□□ -0.55
COPS3-203ENST00000439936 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
COPS3-203ENST00000439936 AFAP1Q8N556 730 aa11.61□□□□□ -0.55
COPS3-203ENST00000439936 ZNF644Q9H582 1327 aaPredicted RBP11.61□□□□□ -0.55
COPS3-203ENST00000439936 ADGRL1O94910 1474 aa11.61□□□□□ -0.55
COPS3-203ENST00000439936 PPARGC1BQ86YN6 1023 aaKnown RBP11.6□□□□□ -0.55
COPS3-203ENST00000439936 ARHGEF12Q9NZN5 1544 aa11.59□□□□□ -0.55
COPS3-203ENST00000439936 RICTORQ6R327 1708 aa11.58□□□□□ -0.56
COPS3-203ENST00000439936 PYGBP11216 843 aa11.58□□□□□ -0.56
COPS3-203ENST00000439936 FRMPD1Q5SYB0 1578 aa11.57□□□□□ -0.56
COPS3-203ENST00000439936 SAMD9LQ8IVG5 1584 aa11.57□□□□□ -0.56
COPS3-203ENST00000439936 TRAPPC8Q9Y2L5 1435 aa11.57□□□□□ -0.56
COPS3-203ENST00000439936 ITSN2Q9NZM3 1697 aa11.56□□□□□ -0.56
COPS3-203ENST00000439936 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
COPS3-203ENST00000439936 POGZQ7Z3K3 1410 aa11.55□□□□□ -0.56
COPS3-203ENST00000439936 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
COPS3-203ENST00000439936 ABCC1P33527 1531 aa11.54□□□□□ -0.56
COPS3-203ENST00000439936 MYOM3Q5VTT5 1437 aa11.54□□□□□ -0.56
COPS3-203ENST00000439936 PLCG2P16885 1265 aa11.54□□□□□ -0.56
COPS3-203ENST00000439936 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
COPS3-203ENST00000439936 TMEM106CQ9BVX2 250 aa11.54□□□□□ -0.56
COPS3-203ENST00000439936 ZNF518AQ6AHZ1 1483 aa11.53□□□□□ -0.56
COPS3-203ENST00000439936 PLEKHH2Q8IVE3 1493 aa11.53□□□□□ -0.56
COPS3-203ENST00000439936 RSPH4AQ5TD94 716 aa11.53□□□□□ -0.56
COPS3-203ENST00000439936 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
COPS3-203ENST00000439936 SLAIN1Q8ND83 568 aa11.53□□□□□ -0.56
COPS3-203ENST00000439936 MIA2Q96PC5 1412 aa11.52□□□□□ -0.56
COPS3-203ENST00000439936 SYCP2Q9BX26 1530 aa11.52□□□□□ -0.57
COPS3-203ENST00000439936 MAGI2Q86UL8 1455 aa11.52□□□□□ -0.57
COPS3-203ENST00000439936 MBD5Q9P267 1494 aa11.52□□□□□ -0.57
COPS3-203ENST00000439936 YEATS2Q9ULM3 1422 aa11.52□□□□□ -0.57
COPS3-203ENST00000439936 ZMYM4Q5VZL5 1548 aa11.51□□□□□ -0.57
COPS3-203ENST00000439936 SPAG9O60271 1321 aaKnown RBP11.51□□□□□ -0.57
COPS3-203ENST00000439936 PCDHB8Q9UN66 801 aa11.51□□□□□ -0.57
COPS3-203ENST00000439936 CAMSAP2Q08AD1 1489 aa11.5□□□□□ -0.57
COPS3-203ENST00000439936 KDM5CP41229 1560 aa11.5□□□□□ -0.57
COPS3-203ENST00000439936 KDM4FA0A1W2PPD8 638 aa11.5□□□□□ -0.57
COPS3-203ENST00000439936 MLH3Q9UHC1 1453 aa11.49□□□□□ -0.57
COPS3-203ENST00000439936 ZFYVE16Q7Z3T8 1539 aa11.49□□□□□ -0.57
COPS3-203ENST00000439936 TSPY4P0CV99 314 aa11.49□□□□□ -0.57
COPS3-203ENST00000439936 TSPY10P0CW01 314 aa11.49□□□□□ -0.57
COPS3-203ENST00000439936 ATP10AO60312 1499 aa11.49□□□□□ -0.57
COPS3-203ENST00000439936 ARID4BQ4LE39 1312 aaPredicted RBP11.48□□□□□ -0.57
COPS3-203ENST00000439936 KIDINS220Q9ULH0 1771 aa11.48□□□□□ -0.57
COPS3-203ENST00000439936 FGD6Q6ZV73 1430 aa11.48□□□□□ -0.57
COPS3-203ENST00000439936 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
COPS3-203ENST00000439936 PTPN23Q9H3S7 1636 aa11.47□□□□□ -0.57
COPS3-203ENST00000439936 HECW2Q9P2P5 1572 aa11.46□□□□□ -0.57
COPS3-203ENST00000439936 FAM50AQ14320 339 aaKnown RBP11.46□□□□□ -0.57
COPS3-203ENST00000439936 GSE1Q14687 1217 aa11.46□□□□□ -0.57
COPS3-203ENST00000439936 ST18O60284 1047 aa11.45□□□□□ -0.58
COPS3-203ENST00000439936 OCEL1Q9H607 264 aa11.45□□□□□ -0.58
COPS3-203ENST00000439936 ARHGEF40Q8TER5 1519 aa11.45□□□□□ -0.58
COPS3-203ENST00000439936 RTEL1-TNFRSF6BF6WH68 1400 aa11.45□□□□□ -0.58
COPS3-203ENST00000439936 ARHGEF5Q12774 1597 aa11.45□□□□□ -0.58
COPS3-203ENST00000439936 TCOF1Q13428 1488 aaKnown RBP11.45□□□□□ -0.58
COPS3-203ENST00000439936 CCDC141Q6ZP82 1450 aa11.45□□□□□ -0.58
COPS3-203ENST00000439936 SNPHO15079 494 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms