RNA–Protein interactions for RNA: ENST00000439790.5

LINC00460-202, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best)

Gene LINC00460, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-202ENST00000439790 ATP10BO94823 1461 aa9.85□□□□□ -0.83
LINC00460-202ENST00000439790 CCER2I3L3R5 266 aa9.85□□□□□ -0.83
LINC00460-202ENST00000439790 UBTFP17480 764 aaKnown RBP9.85□□□□□ -0.83
LINC00460-202ENST00000439790 PIP4K2BP78356 416 aa9.85□□□□□ -0.83
LINC00460-202ENST00000439790 RICTORQ6R327 1708 aa9.85□□□□□ -0.83
LINC00460-202ENST00000439790 ZFYVE16Q7Z3T8 1539 aa9.84□□□□□ -0.83
LINC00460-202ENST00000439790 PRR29P0C7W0 189 aa9.84□□□□□ -0.83
LINC00460-202ENST00000439790 PRKCSHP14314 528 aaPredicted RBP9.84□□□□□ -0.83
LINC00460-202ENST00000439790 ZMYM4Q5VZL5 1548 aa9.83□□□□□ -0.84
LINC00460-202ENST00000439790 MAP3K1Q13233 1512 aa9.82□□□□□ -0.84
LINC00460-202ENST00000439790 CLCN6P51797 869 aa9.82□□□□□ -0.84
LINC00460-202ENST00000439790 CHADLQ6NUI6 762 aa9.82□□□□□ -0.84
LINC00460-202ENST00000439790 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
LINC00460-202ENST00000439790 EFCAB5A4FU69 1503 aa9.79□□□□□ -0.84
LINC00460-202ENST00000439790 CDK11AQ9UQ88 783 aaPredicted RBP9.79□□□□□ -0.84
LINC00460-202ENST00000439790 HECW1Q76N89 1606 aa9.78□□□□□ -0.84
LINC00460-202ENST00000439790 ALKQ9UM73 1620 aa9.78□□□□□ -0.84
LINC00460-202ENST00000439790 POTEAQ6S8J7 498 aa9.77□□□□□ -0.85
LINC00460-202ENST00000439790 CAMSAP1Q5T5Y3 1602 aa9.76□□□□□ -0.85
LINC00460-202ENST00000439790 MAGI2Q86UL8 1455 aa9.75□□□□□ -0.85
LINC00460-202ENST00000439790 SPDYE4A6NLX3 237 aa9.75□□□□□ -0.85
LINC00460-202ENST00000439790 C9orf84Q5VXU9 1444 aa9.74□□□□□ -0.85
LINC00460-202ENST00000439790 ATP10AO60312 1499 aa9.74□□□□□ -0.85
LINC00460-202ENST00000439790 FKBP8Q14318 412 aa9.74□□□□□ -0.85
LINC00460-202ENST00000439790 TRAPPC8Q9Y2L5 1435 aa9.73□□□□□ -0.85
LINC00460-202ENST00000439790 RAPGEF2Q9Y4G8 1499 aa9.72□□□□□ -0.85
LINC00460-202ENST00000439790 C3P01024 1663 aa9.72□□□□□ -0.85
LINC00460-202ENST00000439790 CD44P16070 742 aaKnown RBP9.72□□□□□ -0.85
LINC00460-202ENST00000439790 SETD1AO15047 1707 aaKnown RBP9.71□□□□□ -0.85
LINC00460-202ENST00000439790 POTEIP0CG38 1075 aa9.71□□□□□ -0.86
LINC00460-202ENST00000439790 FARP1Q9Y4F1 1045 aaPredicted RBP9.71□□□□□ -0.86
LINC00460-202ENST00000439790 CCNB3Q8WWL7 1395 aa9.71□□□□□ -0.86
LINC00460-202ENST00000439790 TOM1O60784 492 aa9.7□□□□□ -0.86
LINC00460-202ENST00000439790 P3H3Q8IVL6 736 aa9.7□□□□□ -0.86
LINC00460-202ENST00000439790 SCAPERQ9BY12 1400 aa9.7□□□□□ -0.86
LINC00460-202ENST00000439790 TCOF1Q13428 1488 aaKnown RBP9.69□□□□□ -0.86
LINC00460-202ENST00000439790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC00460-202ENST00000439790 PRXQ9BXM0 1461 aa9.68□□□□□ -0.86
LINC00460-202ENST00000439790 ANP32CO43423 234 aa9.68□□□□□ -0.86
LINC00460-202ENST00000439790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.67□□□□□ -0.86
LINC00460-202ENST00000439790 SETD1BQ9UPS6 1966 aaKnown RBP9.67□□□□□ -0.86
LINC00460-202ENST00000439790 USP35Q9P2H5 1018 aa9.67□□□□□ -0.86
LINC00460-202ENST00000439790 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
LINC00460-202ENST00000439790 NUP153P49790 1475 aaKnown RBP9.66□□□□□ -0.86
LINC00460-202ENST00000439790 DEKP35659 375 aaKnown RBP9.65□□□□□ -0.86
LINC00460-202ENST00000439790 PROM2Q8N271 834 aa9.65□□□□□ -0.86
LINC00460-202ENST00000439790 UPF1Q92900 1129 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC00460-202ENST00000439790 PLA2R1Q13018 1463 aa9.65□□□□□ -0.87
LINC00460-202ENST00000439790 SETD5Q9C0A6 1442 aa9.65□□□□□ -0.87
LINC00460-202ENST00000439790 CFAP74Q9C0B2 1584 aa9.64□□□□□ -0.87
LINC00460-202ENST00000439790 PPP4R2Q9NY27 417 aa9.64□□□□□ -0.87
LINC00460-202ENST00000439790 PKD2Q13563 968 aa9.63□□□□□ -0.87
LINC00460-202ENST00000439790 UBE2Q2Q8WVN8 375 aa9.63□□□□□ -0.87
LINC00460-202ENST00000439790 SHANK2Q9UPX8 1470 aa9.63□□□□□ -0.87
LINC00460-202ENST00000439790 DIP2CQ9Y2E4 1556 aa9.63□□□□□ -0.87
LINC00460-202ENST00000439790 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
LINC00460-202ENST00000439790 AFAP1Q8N556 730 aa9.62□□□□□ -0.87
LINC00460-202ENST00000439790 DCBLD2Q96PD2 775 aa9.62□□□□□ -0.87
LINC00460-202ENST00000439790 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
LINC00460-202ENST00000439790 TIAM1Q13009 1591 aa9.62□□□□□ -0.87
LINC00460-202ENST00000439790 CPS1P31327 1500 aa9.61□□□□□ -0.87
LINC00460-202ENST00000439790 NPATQ14207 1427 aa9.61□□□□□ -0.87
LINC00460-202ENST00000439790 CTTNBP2Q8WZ74 1663 aa9.61□□□□□ -0.87
LINC00460-202ENST00000439790 RAPGEF6Q8TEU7 1601 aa9.6□□□□□ -0.87
LINC00460-202ENST00000439790 PTPRKQ15262 1439 aa9.6□□□□□ -0.87
LINC00460-202ENST00000439790 RAB3GAP2Q9H2M9 1393 aa9.6□□□□□ -0.87
LINC00460-202ENST00000439790 VWDEQ8N2E2 1590 aa9.59□□□□□ -0.87
LINC00460-202ENST00000439790 NEURL4Q96JN8 1562 aa9.59□□□□□ -0.87
LINC00460-202ENST00000439790 PLCH2O75038 1416 aa9.59□□□□□ -0.87
LINC00460-202ENST00000439790 ZNF579Q8NAF0 562 aaKnown RBP9.59□□□□□ -0.87
LINC00460-202ENST00000439790 AGLP35573 1532 aa9.59□□□□□ -0.87
LINC00460-202ENST00000439790 ABCA6Q8N139 1617 aa9.59□□□□□ -0.87
LINC00460-202ENST00000439790 REREQ9P2R6 1566 aa9.58□□□□□ -0.88
LINC00460-202ENST00000439790 CEP170BQ9Y4F5 1589 aaPredicted RBP9.58□□□□□ -0.88
LINC00460-202ENST00000439790 MYO3AQ8NEV4 1616 aa9.58□□□□□ -0.88
LINC00460-202ENST00000439790 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
LINC00460-202ENST00000439790 ZMYM3Q14202 1370 aa9.58□□□□□ -0.88
LINC00460-202ENST00000439790 KDM5CP41229 1560 aa9.58□□□□□ -0.88
LINC00460-202ENST00000439790 PLEKHD1A6NEE1 506 aa9.57□□□□□ -0.88
LINC00460-202ENST00000439790 C11orf95C9JLR9 678 aaPredicted RBP9.57□□□□□ -0.88
LINC00460-202ENST00000439790 BCANQ96GW7 911 aa9.57□□□□□ -0.88
LINC00460-202ENST00000439790 NOP58Q9Y2X3 529 aaKnown RBP9.57□□□□□ -0.88
LINC00460-202ENST00000439790 ZNF142P52746 1687 aaPredicted RBP9.57□□□□□ -0.88
LINC00460-202ENST00000439790 ESF1Q9H501 851 aaKnown RBP9.56□□□□□ -0.88
LINC00460-202ENST00000439790 CNTLNQ9NXG0 1405 aa9.56□□□□□ -0.88
LINC00460-202ENST00000439790 ZNF518AQ6AHZ1 1483 aa9.55□□□□□ -0.88
LINC00460-202ENST00000439790 LRRC7Q96NW7 1537 aa9.54□□□□□ -0.88
LINC00460-202ENST00000439790 ANP32AP39687 249 aaKnown RBP9.53□□□□□ -0.88
LINC00460-202ENST00000439790 ZRANB1Q9UGI0 708 aa9.53□□□□□ -0.88
LINC00460-202ENST00000439790 SAMD9Q5K651 1589 aa9.53□□□□□ -0.88
LINC00460-202ENST00000439790 NCOA2Q15596 1464 aa9.53□□□□□ -0.88
LINC00460-202ENST00000439790 LRRC9Q6ZRR7 1453 aa9.53□□□□□ -0.88
LINC00460-202ENST00000439790 POLR1AO95602 1720 aaPredicted RBP9.52□□□□□ -0.89
LINC00460-202ENST00000439790 TRIM52Q96A61 297 aa9.52□□□□□ -0.89
LINC00460-202ENST00000439790 PLSCR2Q9NRY7 297 aa9.52□□□□□ -0.89
LINC00460-202ENST00000439790 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
LINC00460-202ENST00000439790 PPM1GO15355 546 aaPredicted RBP9.51□□□□□ -0.89
LINC00460-202ENST00000439790 MNX1P50219 401 aaPredicted RBP9.51□□□□□ -0.89
LINC00460-202ENST00000439790 DDX10Q13206 875 aaKnown RBP9.51□□□□□ -0.89
LINC00460-202ENST00000439790 EFCAB2Q5VUJ9 269 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms