RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 AK7Q96M32 723 aa15.09■□□□□ 0.01
GFRA1-204ENST00000439649 NGEFQ8N5V2 710 aa15.09■□□□□ 0.01
GFRA1-204ENST00000439649 RDXP35241 583 aaKnown RBP15.08■□□□□ 0.01
GFRA1-204ENST00000439649 KIF15Q9NS87 1388 aa15.08■□□□□ 0
GFRA1-204ENST00000439649 SF3A1Q15459 793 aaKnown RBP15.08■□□□□ 0
GFRA1-204ENST00000439649 CENPJQ9HC77 1338 aaPredicted RBP15.08■□□□□ 0
GFRA1-204ENST00000439649 H3BQV1 296 aa15.07■□□□□ 0
GFRA1-204ENST00000439649 IFFO2Q5TF58 517 aa15.07■□□□□ 0
GFRA1-204ENST00000439649 NLRP13Q86W25 1043 aa15.07■□□□□ 0
GFRA1-204ENST00000439649 CARMIL2Q6F5E8 1435 aa15.07■□□□□ 0
GFRA1-204ENST00000439649 CENPQQ7L2Z9 268 aaPredicted RBP15.07■□□□□ 0
GFRA1-204ENST00000439649 AAMPQ13685 434 aa15.06■□□□□ 0
GFRA1-204ENST00000439649 SMC4Q9NTJ3 1288 aa15.06■□□□□ 0
GFRA1-204ENST00000439649 PLEKHG5O94827 1062 aa15.06■□□□□ 0
GFRA1-204ENST00000439649 HSP90B2PQ58FF3 399 aa15.06■□□□□ 0
GFRA1-204ENST00000439649 MYO6Q9UM54 1294 aa15.05■□□□□ 0
GFRA1-204ENST00000439649 RUFY1Q96T51 708 aa15.05■□□□□ -0
GFRA1-204ENST00000439649 ANKRD30AQ9BXX3 1397 aa15.04■□□□□ -0
GFRA1-204ENST00000439649 DHX8Q14562 1220 aaKnown RBP15.04■□□□□ -0
GFRA1-204ENST00000439649 ZNF771Q7L3S4 317 aaPredicted RBP15.04■□□□□ -0
GFRA1-204ENST00000439649 MFAP1P55081 439 aaKnown RBP15.04■□□□□ -0
GFRA1-204ENST00000439649 U2AF1L5P0DN76 240 aaPredicted RBP15.04■□□□□ -0
GFRA1-204ENST00000439649 U2AF1Q01081 240 aaKnown RBP eCLIP15.04■□□□□ -0
GFRA1-204ENST00000439649 GSE1Q14687 1217 aa15.04■□□□□ -0
GFRA1-204ENST00000439649 CPLX2Q6PUV4 134 aaKnown RBP15.04■□□□□ -0
GFRA1-204ENST00000439649 ARID3AQ99856 593 aa15.03■□□□□ -0
GFRA1-204ENST00000439649 AKAP17AQ02040 695 aaKnown RBP15.03■□□□□ -0
GFRA1-204ENST00000439649 CGNL1Q0VF96 1302 aa15.03■□□□□ -0
GFRA1-204ENST00000439649 TAF7LQ5H9L4 462 aa15.03■□□□□ -0
GFRA1-204ENST00000439649 WWC1Q8IX03 1113 aa15.03■□□□□ -0
GFRA1-204ENST00000439649 NAT10Q9H0A0 1025 aaKnown RBP15.03■□□□□ -0
GFRA1-204ENST00000439649 CCDC191Q8NCU4 936 aa15.02■□□□□ -0
GFRA1-204ENST00000439649 PRDM2Q13029 1718 aa15.02□□□□□ -0.01
GFRA1-204ENST00000439649 TCEAL9Q9UHQ7 104 aa15.02□□□□□ -0.01
GFRA1-204ENST00000439649 RUFY2Q8WXA3 655 aa15.01□□□□□ -0.01
GFRA1-204ENST00000439649 CCDC47Q96A33 483 aaKnown RBP15.01□□□□□ -0.01
GFRA1-204ENST00000439649 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
GFRA1-204ENST00000439649 PES1O00541 588 aaKnown RBP15.01□□□□□ -0.01
GFRA1-204ENST00000439649 CCDC66A2RUB6 948 aa15□□□□□ -0.01
GFRA1-204ENST00000439649 CCAR2Q8N163 923 aaKnown RBP14.99□□□□□ -0.01
GFRA1-204ENST00000439649 ZKSCAN1P17029 563 aaPredicted RBP14.99□□□□□ -0.01
GFRA1-204ENST00000439649 AMOTL1Q8IY63 956 aa14.99□□□□□ -0.01
GFRA1-204ENST00000439649 DDX49Q9Y6V7 483 aaKnown RBP14.98□□□□□ -0.01
GFRA1-204ENST00000439649 CCP110O43303 1012 aa14.98□□□□□ -0.01
GFRA1-204ENST00000439649 ZBED9Q6R2W3 1325 aa14.98□□□□□ -0.01
GFRA1-204ENST00000439649 APBB1O00213 710 aa14.98□□□□□ -0.01
GFRA1-204ENST00000439649 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.98□□□□□ -0.01
GFRA1-204ENST00000439649 FAM184AQ8NB25 1140 aa14.98□□□□□ -0.01
GFRA1-204ENST00000439649 MARCH6O60337 910 aa14.98□□□□□ -0.01
GFRA1-204ENST00000439649 CCDC173Q0VFZ6 552 aa14.97□□□□□ -0.01
GFRA1-204ENST00000439649 DIAPH3Q9NSV4 1193 aa14.97□□□□□ -0.01
GFRA1-204ENST00000439649 RNF20Q5VTR2 975 aa14.97□□□□□ -0.01
GFRA1-204ENST00000439649 ERCC4Q92889 916 aaPredicted RBP14.97□□□□□ -0.01
GFRA1-204ENST00000439649 CHMP3Q9Y3E7 222 aa14.96□□□□□ -0.01
GFRA1-204ENST00000439649 SYNE3Q6ZMZ3 975 aa14.96□□□□□ -0.01
GFRA1-204ENST00000439649 CREBRFQ8IUR6 639 aa14.96□□□□□ -0.01
GFRA1-204ENST00000439649 CUX1P39880 1505 aa14.96□□□□□ -0.02
GFRA1-204ENST00000439649 KIF7Q2M1P5 1343 aa14.95□□□□□ -0.02
GFRA1-204ENST00000439649 TRIM29Q14134 588 aa14.95□□□□□ -0.02
GFRA1-204ENST00000439649 CAGE1Q8TC20 777 aa14.95□□□□□ -0.02
GFRA1-204ENST00000439649 CUX2O14529 1486 aa14.95□□□□□ -0.02
GFRA1-204ENST00000439649 ZRSR2Q15696 482 aaKnown RBP14.94□□□□□ -0.02
GFRA1-204ENST00000439649 RSPH4AQ5TD94 716 aa14.94□□□□□ -0.02
GFRA1-204ENST00000439649 HMGN5P82970 282 aaKnown RBP14.94□□□□□ -0.02
GFRA1-204ENST00000439649 HOMER1Q86YM7 354 aa14.94□□□□□ -0.02
GFRA1-204ENST00000439649 VPS53Q5VIR6 699 aa14.94□□□□□ -0.02
GFRA1-204ENST00000439649 FANCIQ9NVI1 1328 aa14.94□□□□□ -0.02
GFRA1-204ENST00000439649 MYBBP1AQ9BQG0 1328 aaKnown RBP14.93□□□□□ -0.02
GFRA1-204ENST00000439649 CARMIL1Q5VZK9 1371 aa14.93□□□□□ -0.02
GFRA1-204ENST00000439649 FAM43AQ8N2R8 423 aa14.92□□□□□ -0.02
GFRA1-204ENST00000439649 NUCB2P80303 420 aa14.92□□□□□ -0.02
GFRA1-204ENST00000439649 NUP155O75694 1391 aa14.92□□□□□ -0.02
GFRA1-204ENST00000439649 SIN3AQ96ST3 1273 aa14.91□□□□□ -0.02
GFRA1-204ENST00000439649 RAB3GAP2Q9H2M9 1393 aa14.91□□□□□ -0.02
GFRA1-204ENST00000439649 E9PSI1 815 aa14.91□□□□□ -0.02
GFRA1-204ENST00000439649 HSPA5P11021 654 aaKnown RBP14.91□□□□□ -0.02
GFRA1-204ENST00000439649 CCDC144AA2RUR9 1427 aa14.91□□□□□ -0.02
GFRA1-204ENST00000439649 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.91□□□□□ -0.02
GFRA1-204ENST00000439649 G3V3G9 751 aa14.9□□□□□ -0.02
GFRA1-204ENST00000439649 DCAF8Q5TAQ9 597 aa14.9□□□□□ -0.02
GFRA1-204ENST00000439649 TXLNBQ8N3L3 684 aa14.9□□□□□ -0.02
GFRA1-204ENST00000439649 NOL10Q9BSC4 688 aaKnown RBP14.9□□□□□ -0.02
GFRA1-204ENST00000439649 NEXNQ0ZGT2 675 aa14.89□□□□□ -0.03
GFRA1-204ENST00000439649 GOLGA6L7A0A1B0GV03 622 aa14.89□□□□□ -0.03
GFRA1-204ENST00000439649 CPLX1O14810 134 aa14.89□□□□□ -0.03
GFRA1-204ENST00000439649 LETM1O95202 739 aaPredicted RBP14.89□□□□□ -0.03
GFRA1-204ENST00000439649 DDX19BQ9UMR2 479 aa14.89□□□□□ -0.03
GFRA1-204ENST00000439649 TAF3Q5VWG9 929 aa14.88□□□□□ -0.03
GFRA1-204ENST00000439649 H0YHG0 523 aa14.88□□□□□ -0.03
GFRA1-204ENST00000439649 SENP3Q9H4L4 574 aaPredicted RBP14.88□□□□□ -0.03
GFRA1-204ENST00000439649 MNS1Q8NEH6 495 aa14.88□□□□□ -0.03
GFRA1-204ENST00000439649 CCDC39Q9UFE4 941 aa14.88□□□□□ -0.03
GFRA1-204ENST00000439649 PKD2Q13563 968 aa14.88□□□□□ -0.03
GFRA1-204ENST00000439649 FRAT2O75474 233 aaPredicted RBP14.87□□□□□ -0.03
GFRA1-204ENST00000439649 VSIG10Q8N0Z9 540 aa14.87□□□□□ -0.03
GFRA1-204ENST00000439649 ODF2Q5BJF6 829 aa14.87□□□□□ -0.03
GFRA1-204ENST00000439649 CT47A1Q5JQC4 288 aaPredicted RBP14.87□□□□□ -0.03
GFRA1-204ENST00000439649 CSB-PGBD3P0DP91 1061 aa14.86□□□□□ -0.03
GFRA1-204ENST00000439649 INCENPQ9NQS7 918 aa14.86□□□□□ -0.03
GFRA1-204ENST00000439649 MCTP1Q6DN14 999 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms