RNA–Protein interactions for RNA: ENST00000439525.1

LINC00280-201, long intergenic non-protein coding RNA 280, humanhuman

TSL 2 BASIC

Gene LINC00280, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00280-201ENST00000439525 MLH3Q9UHC1 1453 aa8.22□□□□□ -1.09
LINC00280-201ENST00000439525 FAM9AQ8IZU1 332 aaPredicted RBP8.22□□□□□ -1.09
LINC00280-201ENST00000439525 AFAP1Q8N556 730 aa8.22□□□□□ -1.09
LINC00280-201ENST00000439525 UPF1Q92900 1129 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC00280-201ENST00000439525 MYO5CQ9NQX4 1742 aa8.22□□□□□ -1.09
LINC00280-201ENST00000439525 DNMT1P26358 1616 aaKnown RBP8.21□□□□□ -1.09
LINC00280-201ENST00000439525 PRXQ9BXM0 1461 aa8.21□□□□□ -1.09
LINC00280-201ENST00000439525 STRCP1A6NGW2 1772 aa8.2□□□□□ -1.1
LINC00280-201ENST00000439525 REM2Q8IYK8 340 aaPredicted RBP8.2□□□□□ -1.1
LINC00280-201ENST00000439525 OTUD5Q96G74 571 aa8.2□□□□□ -1.1
LINC00280-201ENST00000439525 LRRC7Q96NW7 1537 aa8.19□□□□□ -1.1
LINC00280-201ENST00000439525 CLTCQ00610 1675 aaKnown RBP8.19□□□□□ -1.1
LINC00280-201ENST00000439525 SLC24A1O60721 1099 aa8.19□□□□□ -1.1
LINC00280-201ENST00000439525 A2ML1A8K2U0 1454 aa8.19□□□□□ -1.1
LINC00280-201ENST00000439525 SYNMO15061 1565 aa8.18□□□□□ -1.1
LINC00280-201ENST00000439525 KIDINS220Q9ULH0 1771 aa8.18□□□□□ -1.1
LINC00280-201ENST00000439525 EFCAB2Q5VUJ9 269 aa8.18□□□□□ -1.1
LINC00280-201ENST00000439525 CDK13Q14004 1512 aaKnown RBP8.18□□□□□ -1.1
LINC00280-201ENST00000439525 KIF14Q15058 1648 aa8.16□□□□□ -1.1
LINC00280-201ENST00000439525 ARHGAP5Q13017 1502 aa8.15□□□□□ -1.1
LINC00280-201ENST00000439525 C19orf67A6NJJ6 358 aa8.15□□□□□ -1.1
LINC00280-201ENST00000439525 ABCC1P33527 1531 aa8.14□□□□□ -1.11
LINC00280-201ENST00000439525 MED14O60244 1454 aa8.14□□□□□ -1.11
LINC00280-201ENST00000439525 MYT1LQ9UL68 1186 aa8.14□□□□□ -1.11
LINC00280-201ENST00000439525 ITSN2Q9NZM3 1697 aa8.14□□□□□ -1.11
LINC00280-201ENST00000439525 DEPDC5O75140 1603 aa8.14□□□□□ -1.11
LINC00280-201ENST00000439525 IQGAP1P46940 1657 aa8.13□□□□□ -1.11
LINC00280-201ENST00000439525 PLXNC1O60486 1568 aa8.13□□□□□ -1.11
LINC00280-201ENST00000439525 XIRP1Q702N8 1843 aaKnown RBP8.13□□□□□ -1.11
LINC00280-201ENST00000439525 NPHP4O75161 1426 aaPredicted RBP8.12□□□□□ -1.11
LINC00280-201ENST00000439525 CDC42BPBQ9Y5S2 1711 aa8.12□□□□□ -1.11
LINC00280-201ENST00000439525 PITPNM1O00562 1244 aa8.12□□□□□ -1.11
LINC00280-201ENST00000439525 NCBP3Q53F19 620 aaKnown RBP8.12□□□□□ -1.11
LINC00280-201ENST00000439525 FAM135BQ49AJ0 1406 aa8.12□□□□□ -1.11
LINC00280-201ENST00000439525 SAMD9LQ8IVG5 1584 aa8.1□□□□□ -1.11
LINC00280-201ENST00000439525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC00280-201ENST00000439525 EP400Q96L91 3159 aa8.09□□□□□ -1.11
LINC00280-201ENST00000439525 ROBO1Q9Y6N7 1651 aa8.09□□□□□ -1.11
LINC00280-201ENST00000439525 TRIM52Q96A61 297 aa8.09□□□□□ -1.11
LINC00280-201ENST00000439525 ZC3H13Q5T200 1668 aaKnown RBP8.08□□□□□ -1.12
LINC00280-201ENST00000439525 PREX2Q70Z35 1606 aa8.08□□□□□ -1.12
LINC00280-201ENST00000439525 ANKLE2Q86XL3 938 aa8.08□□□□□ -1.12
LINC00280-201ENST00000439525 LRP6O75581 1613 aa8.07□□□□□ -1.12
LINC00280-201ENST00000439525 CDK12Q9NYV4 1490 aaPredicted RBP8.07□□□□□ -1.12
LINC00280-201ENST00000439525 SETBP1Q9Y6X0 1596 aa8.07□□□□□ -1.12
LINC00280-201ENST00000439525 TNRQ92752 1358 aa8.07□□□□□ -1.12
LINC00280-201ENST00000439525 TROQ12816 1431 aaPredicted RBP8.06□□□□□ -1.12
LINC00280-201ENST00000439525 UGGT1Q9NYU2 1555 aa8.05□□□□□ -1.12
LINC00280-201ENST00000439525 INO80Q9ULG1 1556 aaPredicted RBP8.05□□□□□ -1.12
LINC00280-201ENST00000439525 A2MP01023 1474 aa8.05□□□□□ -1.12
LINC00280-201ENST00000439525 ATP7AQ04656 1500 aa8.04□□□□□ -1.12
LINC00280-201ENST00000439525 JCADQ9P266 1359 aa8.04□□□□□ -1.12
LINC00280-201ENST00000439525 PZPP20742 1482 aa8.04□□□□□ -1.12
LINC00280-201ENST00000439525 NLRP1Q9C000 1473 aa8.04□□□□□ -1.12
LINC00280-201ENST00000439525 FAM135AQ9P2D6 1515 aa8.03□□□□□ -1.12
LINC00280-201ENST00000439525 PHLPP1O60346 1717 aa8.03□□□□□ -1.12
LINC00280-201ENST00000439525 FBXO31Q5XUX0 539 aaPredicted RBP8.03□□□□□ -1.12
LINC00280-201ENST00000439525 ZNF772Q68DY9 489 aaPredicted RBP8.03□□□□□ -1.12
LINC00280-201ENST00000439525 GGT6Q6P531 493 aa8.03□□□□□ -1.12
LINC00280-201ENST00000439525 COL16A1Q07092 1604 aaPredicted RBP8.03□□□□□ -1.12
LINC00280-201ENST00000439525 MAP3K1Q13233 1512 aa8.03□□□□□ -1.12
LINC00280-201ENST00000439525 SYCP2Q9BX26 1530 aa8.03□□□□□ -1.12
LINC00280-201ENST00000439525 KDM5DQ9BY66 1539 aa8.03□□□□□ -1.12
LINC00280-201ENST00000439525 THEMISQ8N1K5 641 aaPredicted RBP8.02□□□□□ -1.13
LINC00280-201ENST00000439525 LRRC9Q6ZRR7 1453 aa8.01□□□□□ -1.13
LINC00280-201ENST00000439525 CDC42BPAQ5VT25 1732 aa8.01□□□□□ -1.13
LINC00280-201ENST00000439525 RXRBP28702 533 aa8.01□□□□□ -1.13
LINC00280-201ENST00000439525 RANGAP1P46060 587 aaPredicted RBP8.01□□□□□ -1.13
LINC00280-201ENST00000439525 APLP2Q06481 763 aa8.01□□□□□ -1.13
LINC00280-201ENST00000439525 RGS12O14924 1447 aa8.01□□□□□ -1.13
LINC00280-201ENST00000439525 CLIP1P30622 1438 aa8.01□□□□□ -1.13
LINC00280-201ENST00000439525 SPAG9O60271 1321 aaKnown RBP8.01□□□□□ -1.13
LINC00280-201ENST00000439525 LRRIQ1Q96JM4 1722 aa8□□□□□ -1.13
LINC00280-201ENST00000439525 MIA2Q96PC5 1412 aa8□□□□□ -1.13
LINC00280-201ENST00000439525 ADGBQ8N7X0 1667 aa7.99□□□□□ -1.13
LINC00280-201ENST00000439525 CDK11AQ9UQ88 783 aaPredicted RBP7.99□□□□□ -1.13
LINC00280-201ENST00000439525 SPATA31A6Q5VVP1 1343 aa7.99□□□□□ -1.13
LINC00280-201ENST00000439525 TMEM94Q12767 1356 aa7.98□□□□□ -1.13
LINC00280-201ENST00000439525 FGD6Q6ZV73 1430 aa7.98□□□□□ -1.13
LINC00280-201ENST00000439525 LCE2DQ5TA82 110 aaPredicted RBP7.98□□□□□ -1.13
LINC00280-201ENST00000439525 ZRANB1Q9UGI0 708 aa7.98□□□□□ -1.13
LINC00280-201ENST00000439525 SCAF11Q99590 1463 aaKnown RBP7.98□□□□□ -1.13
LINC00280-201ENST00000439525 SHPRHQ149N8 1683 aa7.98□□□□□ -1.13
LINC00280-201ENST00000439525 LRP5O75197 1615 aa7.97□□□□□ -1.13
LINC00280-201ENST00000439525 UBR1Q8IWV7 1749 aa7.96□□□□□ -1.14
LINC00280-201ENST00000439525 MEX3CQ5U5Q3 659 aaKnown RBP7.96□□□□□ -1.14
LINC00280-201ENST00000439525 TIAM1Q13009 1591 aa7.96□□□□□ -1.14
LINC00280-201ENST00000439525 ARHGAP23Q9P227 1491 aa7.95□□□□□ -1.14
LINC00280-201ENST00000439525 POTEB2H3BUK9 544 aa7.95□□□□□ -1.14
LINC00280-201ENST00000439525 RBM33Q96EV2 1170 aaKnown RBP7.95□□□□□ -1.14
LINC00280-201ENST00000439525 RTN4Q9NQC3 1192 aaKnown RBP7.95□□□□□ -1.14
LINC00280-201ENST00000439525 FMN1Q68DA7 1419 aa7.95□□□□□ -1.14
LINC00280-201ENST00000439525 SLIT1O75093 1534 aa7.94□□□□□ -1.14
LINC00280-201ENST00000439525 NPM3O75607 178 aaKnown RBP7.94□□□□□ -1.14
LINC00280-201ENST00000439525 HNRNPMP52272 730 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC00280-201ENST00000439525 KIAA1107Q9UPP5 1409 aa7.94□□□□□ -1.14
LINC00280-201ENST00000439525 NCOA2Q15596 1464 aa7.94□□□□□ -1.14
LINC00280-201ENST00000439525 PRDM15P57071 1507 aaPredicted RBP7.93□□□□□ -1.14
LINC00280-201ENST00000439525 DIP2AQ14689 1571 aa7.93□□□□□ -1.14
LINC00280-201ENST00000439525 AHDC1Q5TGY3 1603 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms