RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 CAMK2BQ13554 666 aa11.92□□□□□ -0.5
CHEK2-217ENST00000439346 DDX12PQ92771 950 aa11.92□□□□□ -0.5
CHEK2-217ENST00000439346 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
CHEK2-217ENST00000439346 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
CHEK2-217ENST00000439346 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
CHEK2-217ENST00000439346 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.5
CHEK2-217ENST00000439346 C6orf132Q5T0Z8 1188 aa11.89□□□□□ -0.51
CHEK2-217ENST00000439346 ANKK1Q8NFD2 765 aa11.87□□□□□ -0.51
CHEK2-217ENST00000439346 A0A0G2JS52 829 aa11.84□□□□□ -0.51
CHEK2-217ENST00000439346 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
CHEK2-217ENST00000439346 ZFRQ96KR1 1074 aaKnown RBP11.84□□□□□ -0.51
CHEK2-217ENST00000439346 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
CHEK2-217ENST00000439346 EPAS1Q99814 870 aa11.83□□□□□ -0.52
CHEK2-217ENST00000439346 SOWAHBA6NEL2 793 aa11.81□□□□□ -0.52
CHEK2-217ENST00000439346 IFFO2Q5TF58 517 aa11.81□□□□□ -0.52
CHEK2-217ENST00000439346 WBP1LQ9NX94 342 aa11.81□□□□□ -0.52
CHEK2-217ENST00000439346 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
CHEK2-217ENST00000439346 NBR1Q14596 966 aa11.8□□□□□ -0.52
CHEK2-217ENST00000439346 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
CHEK2-217ENST00000439346 LAPTM4BQ86VI4 370 aa11.78□□□□□ -0.52
CHEK2-217ENST00000439346 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
CHEK2-217ENST00000439346 MAP3K7O43318 606 aa11.76□□□□□ -0.53
CHEK2-217ENST00000439346 EN1Q05925 392 aaPredicted RBP11.75□□□□□ -0.53
CHEK2-217ENST00000439346 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
CHEK2-217ENST00000439346 PDIA6Q15084 440 aa11.74□□□□□ -0.53
CHEK2-217ENST00000439346 SPRYD3Q8NCJ5 442 aa11.74□□□□□ -0.53
CHEK2-217ENST00000439346 SMAPO00193 183 aa11.73□□□□□ -0.53
CHEK2-217ENST00000439346 ONECUT3O60422 494 aaPredicted RBP11.73□□□□□ -0.53
CHEK2-217ENST00000439346 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
CHEK2-217ENST00000439346 HPS5Q9UPZ3 1129 aa11.72□□□□□ -0.53
CHEK2-217ENST00000439346 C3orf80F5H4A9 247 aa11.71□□□□□ -0.53
CHEK2-217ENST00000439346 CFAP44Q96MT7 982 aa11.71□□□□□ -0.53
CHEK2-217ENST00000439346 IRX2Q9BZI1 471 aaPredicted RBP11.71□□□□□ -0.53
CHEK2-217ENST00000439346 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.53
CHEK2-217ENST00000439346 GRXCR2A6NFK2 248 aa11.7□□□□□ -0.54
CHEK2-217ENST00000439346 RGS20O76081 388 aa11.7□□□□□ -0.54
CHEK2-217ENST00000439346 LRCH3Q96II8 777 aa11.7□□□□□ -0.54
CHEK2-217ENST00000439346 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.7□□□□□ -0.54
CHEK2-217ENST00000439346 PAXIP1Q6ZW49 1069 aaPredicted RBP11.69□□□□□ -0.54
CHEK2-217ENST00000439346 E2F4Q16254 413 aa11.68□□□□□ -0.54
CHEK2-217ENST00000439346 CDHR5Q9HBB8 845 aa11.67□□□□□ -0.54
CHEK2-217ENST00000439346 TSR3Q9UJK0 312 aaKnown RBP11.67□□□□□ -0.54
CHEK2-217ENST00000439346 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
CHEK2-217ENST00000439346 CDCA7LQ96GN5 454 aa11.66□□□□□ -0.54
CHEK2-217ENST00000439346 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
CHEK2-217ENST00000439346 SPDYE16A6NNV3 312 aaPredicted RBP11.65□□□□□ -0.54
CHEK2-217ENST00000439346 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
CHEK2-217ENST00000439346 KCNC4Q03721 635 aa11.64□□□□□ -0.55
CHEK2-217ENST00000439346 PRSS12P56730 875 aa11.63□□□□□ -0.55
CHEK2-217ENST00000439346 SAMD7Q7Z3H4 446 aa11.63□□□□□ -0.55
CHEK2-217ENST00000439346 NYAP1Q6ZVC0 841 aa11.62□□□□□ -0.55
CHEK2-217ENST00000439346 OSBPP22059 807 aa11.6□□□□□ -0.55
CHEK2-217ENST00000439346 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
CHEK2-217ENST00000439346 PPP4CP60510 307 aa11.59□□□□□ -0.55
CHEK2-217ENST00000439346 PNMA3Q9UL41 463 aa11.59□□□□□ -0.55
CHEK2-217ENST00000439346 TATDN2Q93075 761 aa11.58□□□□□ -0.56
CHEK2-217ENST00000439346 RNF40O75150 1001 aa11.56□□□□□ -0.56
CHEK2-217ENST00000439346 NUDT18Q6ZVK8 323 aa11.55□□□□□ -0.56
CHEK2-217ENST00000439346 ARIH1Q9Y4X5 557 aaPredicted RBP11.55□□□□□ -0.56
CHEK2-217ENST00000439346 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
CHEK2-217ENST00000439346 TJAP1Q5JTD0 557 aa11.54□□□□□ -0.56
CHEK2-217ENST00000439346 NBPF26B4DH59 902 aa11.52□□□□□ -0.57
CHEK2-217ENST00000439346 MTRQ99707 1265 aa11.52□□□□□ -0.57
CHEK2-217ENST00000439346 Q6ZNB5 142 aa11.51□□□□□ -0.57
CHEK2-217ENST00000439346 CERKQ8TCT0 537 aa11.51□□□□□ -0.57
CHEK2-217ENST00000439346 ZNF516Q92618 1163 aa11.51□□□□□ -0.57
CHEK2-217ENST00000439346 PADI6Q6TGC4 694 aa11.5□□□□□ -0.57
CHEK2-217ENST00000439346 NPDC1Q9NQX5 325 aaPredicted RBP11.5□□□□□ -0.57
CHEK2-217ENST00000439346 APLP1P51693 650 aa11.49□□□□□ -0.57
CHEK2-217ENST00000439346 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
CHEK2-217ENST00000439346 NKX2-3Q8TAU0 364 aa11.46□□□□□ -0.57
CHEK2-217ENST00000439346 SWT1Q5T5J6 900 aaKnown RBP11.45□□□□□ -0.58
CHEK2-217ENST00000439346 LCE2BO14633 110 aa11.44□□□□□ -0.58
CHEK2-217ENST00000439346 PPP1R18Q6NYC8 613 aa11.44□□□□□ -0.58
CHEK2-217ENST00000439346 IL21Q9HBE4 155 aa11.44□□□□□ -0.58
CHEK2-217ENST00000439346 TSHZ2Q9NRE2 1034 aa11.44□□□□□ -0.58
CHEK2-217ENST00000439346 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
CHEK2-217ENST00000439346 PRKD2Q9BZL6 878 aa11.43□□□□□ -0.58
CHEK2-217ENST00000439346 COPS2P61201 443 aa11.42□□□□□ -0.58
CHEK2-217ENST00000439346 RBM27Q9P2N5 1060 aaKnown RBP11.41□□□□□ -0.58
CHEK2-217ENST00000439346 GFRA3O60609 400 aa11.4□□□□□ -0.58
CHEK2-217ENST00000439346 HDGFP51858 240 aaKnown RBP11.4□□□□□ -0.58
CHEK2-217ENST00000439346 KCNV2Q8TDN2 545 aa11.38□□□□□ -0.59
CHEK2-217ENST00000439346 EYA1Q99502 592 aa11.38□□□□□ -0.59
CHEK2-217ENST00000439346 FAM161AQ3B820 660 aa11.36□□□□□ -0.59
CHEK2-217ENST00000439346 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.35□□□□□ -0.59
CHEK2-217ENST00000439346 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
CHEK2-217ENST00000439346 PTGDRQ13258 359 aa11.31□□□□□ -0.6
CHEK2-217ENST00000439346 ARHGEF1Q92888 912 aaKnown RBP11.31□□□□□ -0.6
CHEK2-217ENST00000439346 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
CHEK2-217ENST00000439346 BLOC1S3Q6QNY0 202 aa11.29□□□□□ -0.6
CHEK2-217ENST00000439346 ZPR1O75312 459 aa11.28□□□□□ -0.6
CHEK2-217ENST00000439346 LAPTM4AQ15012 233 aa11.28□□□□□ -0.6
CHEK2-217ENST00000439346 NUTM2FA1L443 756 aa11.27□□□□□ -0.61
CHEK2-217ENST00000439346 TLL1O43897 1013 aa11.27□□□□□ -0.61
CHEK2-217ENST00000439346 V9GY48 417 aaPredicted RBP11.27□□□□□ -0.61
CHEK2-217ENST00000439346 PCDHB3Q9Y5E6 796 aa11.26□□□□□ -0.61
CHEK2-217ENST00000439346 ADGRG1Q9Y653 693 aa11.26□□□□□ -0.61
CHEK2-217ENST00000439346 NRG2O14511 850 aaPredicted RBP11.25□□□□□ -0.61
CHEK2-217ENST00000439346 PDZRN3Q9UPQ7 1066 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms