RNA–Protein interactions for RNA: ENST00000439209.5

LRTOMT-208, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-208ENST00000439209 RNF17Q9BXT8 1623 aaKnown RBP17.75■□□□□ 0.43
LRTOMT-208ENST00000439209 EIF2AK4Q9P2K8 1649 aaKnown RBP17.74■□□□□ 0.43
LRTOMT-208ENST00000439209 ZC3H13Q5T200 1668 aaKnown RBP17.73■□□□□ 0.43
LRTOMT-208ENST00000439209 MIA2Q96PC5 1412 aa17.72■□□□□ 0.43
LRTOMT-208ENST00000439209 DNMT1P26358 1616 aaKnown RBP17.72■□□□□ 0.43
LRTOMT-208ENST00000439209 LTBP4Q8N2S1 1624 aa17.72■□□□□ 0.43
LRTOMT-208ENST00000439209 POLR1AO95602 1720 aaPredicted RBP17.72■□□□□ 0.43
LRTOMT-208ENST00000439209 PLA2R1Q13018 1463 aa17.72■□□□□ 0.43
LRTOMT-208ENST00000439209 KIF3BO15066 747 aa17.72■□□□□ 0.43
LRTOMT-208ENST00000439209 PZPP20742 1482 aa17.7■□□□□ 0.42
LRTOMT-208ENST00000439209 CEP152O94986 1710 aa17.7■□□□□ 0.42
LRTOMT-208ENST00000439209 PTPN23Q9H3S7 1636 aa17.7■□□□□ 0.42
LRTOMT-208ENST00000439209 TSPY4P0CV99 314 aa17.7■□□□□ 0.42
LRTOMT-208ENST00000439209 TSPY10P0CW01 314 aa17.7■□□□□ 0.42
LRTOMT-208ENST00000439209 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
LRTOMT-208ENST00000439209 TCOF1Q13428 1488 aaKnown RBP17.69■□□□□ 0.42
LRTOMT-208ENST00000439209 MROH1Q8NDA8 1641 aa17.69■□□□□ 0.42
LRTOMT-208ENST00000439209 NCKAP5LQ9HCH0 1330 aa17.67■□□□□ 0.42
LRTOMT-208ENST00000439209 ABCC3O15438 1527 aa17.66■□□□□ 0.42
LRTOMT-208ENST00000439209 WASHC2CQ9Y4E1 1318 aa17.65■□□□□ 0.42
LRTOMT-208ENST00000439209 TNRQ92752 1358 aa17.65■□□□□ 0.42
LRTOMT-208ENST00000439209 DUOX2Q9NRD8 1548 aa17.64■□□□□ 0.41
LRTOMT-208ENST00000439209 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.41
LRTOMT-208ENST00000439209 SHANK2Q9UPX8 1470 aa17.63■□□□□ 0.41
LRTOMT-208ENST00000439209 CFAP65Q6ZU64 1925 aaKnown RBP17.63■□□□□ 0.41
LRTOMT-208ENST00000439209 NEURL4Q96JN8 1562 aa17.63■□□□□ 0.41
LRTOMT-208ENST00000439209 IQSEC2Q5JU85 1478 aa17.63■□□□□ 0.41
LRTOMT-208ENST00000439209 PKD2Q13563 968 aa17.62■□□□□ 0.41
LRTOMT-208ENST00000439209 SPATA31D1Q6ZQQ2 1576 aa17.62■□□□□ 0.41
LRTOMT-208ENST00000439209 APLP2Q06481 763 aa17.61■□□□□ 0.41
LRTOMT-208ENST00000439209 ABCC5O15440 1437 aa17.6■□□□□ 0.41
LRTOMT-208ENST00000439209 FGD6Q6ZV73 1430 aa17.6■□□□□ 0.41
LRTOMT-208ENST00000439209 PRDM15P57071 1507 aaPredicted RBP17.6■□□□□ 0.41
LRTOMT-208ENST00000439209 DEPDC5O75140 1603 aa17.6■□□□□ 0.41
LRTOMT-208ENST00000439209 UGGT1Q9NYU2 1555 aa17.59■□□□□ 0.41
LRTOMT-208ENST00000439209 NLRP1Q9C000 1473 aa17.59■□□□□ 0.41
LRTOMT-208ENST00000439209 ZNF335Q9H4Z2 1342 aaPredicted RBP17.59■□□□□ 0.41
LRTOMT-208ENST00000439209 DAPK1P53355 1430 aa17.58■□□□□ 0.41
LRTOMT-208ENST00000439209 KIF15Q9NS87 1388 aa17.57■□□□□ 0.4
LRTOMT-208ENST00000439209 ERVK-7P63135 1459 aa17.56■□□□□ 0.4
LRTOMT-208ENST00000439209 ERBINQ96RT1 1412 aa17.56■□□□□ 0.4
LRTOMT-208ENST00000439209 UBR1Q8IWV7 1749 aa17.55■□□□□ 0.4
LRTOMT-208ENST00000439209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.54■□□□□ 0.4
LRTOMT-208ENST00000439209 IQGAP1P46940 1657 aa17.54■□□□□ 0.4
LRTOMT-208ENST00000439209 RRP7BPQ9NSQ0 103 aa17.51■□□□□ 0.39
LRTOMT-208ENST00000439209 VWDEQ8N2E2 1590 aa17.5■□□□□ 0.39
LRTOMT-208ENST00000439209 MED14O60244 1454 aa17.5■□□□□ 0.39
LRTOMT-208ENST00000439209 THEMISQ8N1K5 641 aaPredicted RBP17.49■□□□□ 0.39
LRTOMT-208ENST00000439209 STRCP1A6NGW2 1772 aa17.48■□□□□ 0.39
LRTOMT-208ENST00000439209 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
LRTOMT-208ENST00000439209 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
LRTOMT-208ENST00000439209 CPS1P31327 1500 aa17.47■□□□□ 0.39
LRTOMT-208ENST00000439209 PIK3C2BO00750 1634 aa17.47■□□□□ 0.39
LRTOMT-208ENST00000439209 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
LRTOMT-208ENST00000439209 ADGRL2O95490 1459 aa17.47■□□□□ 0.39
LRTOMT-208ENST00000439209 ANKRD30AQ9BXX3 1397 aa17.46■□□□□ 0.39
LRTOMT-208ENST00000439209 CHIC2Q9UKJ5 165 aa17.46■□□□□ 0.39
LRTOMT-208ENST00000439209 LMTK2Q8IWU2 1503 aa17.46■□□□□ 0.39
LRTOMT-208ENST00000439209 EFCAB6Q5THR3 1501 aa17.43■□□□□ 0.38
LRTOMT-208ENST00000439209 KDM5AP29375 1690 aaKnown RBP17.43■□□□□ 0.38
LRTOMT-208ENST00000439209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
LRTOMT-208ENST00000439209 KANK1Q14678 1352 aa17.42■□□□□ 0.38
LRTOMT-208ENST00000439209 SYNMO15061 1565 aa17.42■□□□□ 0.38
LRTOMT-208ENST00000439209 UBAP1LF5GYI3 381 aa17.42■□□□□ 0.38
LRTOMT-208ENST00000439209 SLIT1O75093 1534 aa17.42■□□□□ 0.38
LRTOMT-208ENST00000439209 ARHGAP23Q9P227 1491 aa17.41■□□□□ 0.38
LRTOMT-208ENST00000439209 SCAF11Q99590 1463 aaKnown RBP17.4■□□□□ 0.38
LRTOMT-208ENST00000439209 FAM50AQ14320 339 aaKnown RBP17.4■□□□□ 0.38
LRTOMT-208ENST00000439209 GCC2Q8IWJ2 1684 aa17.39■□□□□ 0.37
LRTOMT-208ENST00000439209 TET3O43151 1660 aa17.38■□□□□ 0.37
LRTOMT-208ENST00000439209 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
LRTOMT-208ENST00000439209 UNC13BO14795 1591 aa17.37■□□□□ 0.37
LRTOMT-208ENST00000439209 DISP3Q9P2K9 1392 aa17.37■□□□□ 0.37
LRTOMT-208ENST00000439209 ALKQ9UM73 1620 aa17.36■□□□□ 0.37
LRTOMT-208ENST00000439209 XIRP1Q702N8 1843 aaKnown RBP17.36■□□□□ 0.37
LRTOMT-208ENST00000439209 ANKRD50Q9ULJ7 1429 aa17.36■□□□□ 0.37
LRTOMT-208ENST00000439209 ADGRB3O60242 1522 aa17.35■□□□□ 0.37
LRTOMT-208ENST00000439209 NOS1P29475 1434 aa17.34■□□□□ 0.37
LRTOMT-208ENST00000439209 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
LRTOMT-208ENST00000439209 LTKP29376 864 aa17.33■□□□□ 0.36
LRTOMT-208ENST00000439209 E9PCH4 1651 aa17.32■□□□□ 0.36
LRTOMT-208ENST00000439209 RPRD2Q5VT52 1461 aaKnown RBP17.31■□□□□ 0.36
LRTOMT-208ENST00000439209 TMEM2Q9UHN6 1383 aa17.31■□□□□ 0.36
LRTOMT-208ENST00000439209 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
LRTOMT-208ENST00000439209 IQGAP3Q86VI3 1631 aa17.3■□□□□ 0.36
LRTOMT-208ENST00000439209 TXNDC2Q86VQ3 553 aa17.3■□□□□ 0.36
LRTOMT-208ENST00000439209 TOM1O60784 492 aa17.29■□□□□ 0.36
LRTOMT-208ENST00000439209 PIP4K2BP78356 416 aa17.29■□□□□ 0.36
LRTOMT-208ENST00000439209 IDI1Q13907 227 aa17.29■□□□□ 0.36
LRTOMT-208ENST00000439209 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
LRTOMT-208ENST00000439209 EID1Q9Y6B2 187 aa17.28■□□□□ 0.36
LRTOMT-208ENST00000439209 ILDR2Q71H61 639 aa17.27■□□□□ 0.36
LRTOMT-208ENST00000439209 ROCK1Q13464 1354 aa17.27■□□□□ 0.35
LRTOMT-208ENST00000439209 TMEM131LA2VDJ0 1609 aa17.26■□□□□ 0.35
LRTOMT-208ENST00000439209 HSPA1LP34931 641 aa17.25■□□□□ 0.35
LRTOMT-208ENST00000439209 MED1Q15648 1581 aaPredicted RBP17.23■□□□□ 0.35
LRTOMT-208ENST00000439209 PPARGC1BQ86YN6 1023 aaKnown RBP17.23■□□□□ 0.35
LRTOMT-208ENST00000439209 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
LRTOMT-208ENST00000439209 SLC52A1Q9NWF4 448 aa17.22■□□□□ 0.35
LRTOMT-208ENST00000439209 CHD2O14647 1828 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms