RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 HECW2Q9P2P5 1572 aa23.89■■□□□ 1.41
GSE1-206ENST00000438180 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
GSE1-206ENST00000438180 MLH3Q9UHC1 1453 aa23.88■■□□□ 1.41
GSE1-206ENST00000438180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.88■■□□□ 1.413e-10■■□□□ 12.4
GSE1-206ENST00000438180 KANK1Q14678 1352 aa23.84■■□□□ 1.41
GSE1-206ENST00000438180 CCDC144AA2RUR9 1427 aa23.81■■□□□ 1.4
GSE1-206ENST00000438180 ATP10AO60312 1499 aa23.81■■□□□ 1.4
GSE1-206ENST00000438180 PRDM15P57071 1507 aaPredicted RBP23.81■■□□□ 1.4
GSE1-206ENST00000438180 A2MP01023 1474 aa23.81■■□□□ 1.4
GSE1-206ENST00000438180 TET3O43151 1660 aa23.79■■□□□ 1.4
GSE1-206ENST00000438180 FAM69CQ0P6D2 419 aa23.79■■□□□ 1.4
GSE1-206ENST00000438180 VWDEQ8N2E2 1590 aa23.79■■□□□ 1.4
GSE1-206ENST00000438180 RICTORQ6R327 1708 aa23.79■■□□□ 1.4
GSE1-206ENST00000438180 RNF17Q9BXT8 1623 aaKnown RBP23.77■■□□□ 1.4
GSE1-206ENST00000438180 KIF3BO15066 747 aa23.76■■□□□ 1.39
GSE1-206ENST00000438180 BCORL1Q5H9F3 1711 aa23.76■■□□□ 1.39
GSE1-206ENST00000438180 E9PCH4 1651 aa23.74■■□□□ 1.39
GSE1-206ENST00000438180 ABCA6Q8N139 1617 aa23.74■■□□□ 1.39
GSE1-206ENST00000438180 MROH1Q8NDA8 1641 aa23.73■■□□□ 1.39
GSE1-206ENST00000438180 PLA2R1Q13018 1463 aa23.72■■□□□ 1.39
GSE1-206ENST00000438180 UHRF1BP1Q6BDS2 1440 aa23.72■■□□□ 1.39
GSE1-206ENST00000438180 EIF4G2P78344 907 aaKnown RBP eCLIP23.7■■□□□ 1.39
GSE1-206ENST00000438180 FRMPD1Q5SYB0 1578 aa23.7■■□□□ 1.38
GSE1-206ENST00000438180 SPHKAPQ2M3C7 1700 aa23.7■■□□□ 1.38
GSE1-206ENST00000438180 TRPM2O94759 1503 aa23.69■■□□□ 1.38
GSE1-206ENST00000438180 ZMYM4Q5VZL5 1548 aa23.69■■□□□ 1.38
GSE1-206ENST00000438180 LMTK2Q8IWU2 1503 aa23.69■■□□□ 1.38
GSE1-206ENST00000438180 PPRC1Q5VV67 1664 aaKnown RBP23.69■■□□□ 1.38
GSE1-206ENST00000438180 TSPOAP1O95153 1857 aa23.68■■□□□ 1.38
GSE1-206ENST00000438180 DIP2CQ9Y2E4 1556 aa23.68■■□□□ 1.38
GSE1-206ENST00000438180 RAPGEF3O95398 923 aa23.68■■□□□ 1.38
GSE1-206ENST00000438180 NBPF8Q3BBV2 869 aa23.68■■□□□ 1.38
GSE1-206ENST00000438180 PTPRTO14522 1441 aa23.66■■□□□ 1.38
GSE1-206ENST00000438180 EFCAB6Q5THR3 1501 aa23.66■■□□□ 1.38
GSE1-206ENST00000438180 KIF13AQ9H1H9 1805 aa23.66■■□□□ 1.38
GSE1-206ENST00000438180 RALGAPBQ86X10 1494 aa23.64■■□□□ 1.37
GSE1-206ENST00000438180 HSPA5P11021 654 aaKnown RBP23.63■■□□□ 1.37
GSE1-206ENST00000438180 MIER1Q8N108 512 aa23.62■■□□□ 1.37
GSE1-206ENST00000438180 CEP152O94986 1710 aa23.61■■□□□ 1.37
GSE1-206ENST00000438180 DCAF11Q8TEB1 546 aa23.6■■□□□ 1.37
GSE1-206ENST00000438180 HIRIP3Q9BW71 556 aaPredicted RBP23.59■■□□□ 1.37
GSE1-206ENST00000438180 ZNF326Q5BKZ1 582 aaKnown RBP23.59■■□□□ 1.37
GSE1-206ENST00000438180 NEURL4Q96JN8 1562 aa23.57■■□□□ 1.36
GSE1-206ENST00000438180 ZC3H13Q5T200 1668 aaKnown RBP23.56■■□□□ 1.36
GSE1-206ENST00000438180 CLTCL1P53675 1640 aa23.56■■□□□ 1.36
GSE1-206ENST00000438180 SPATA31E1Q6ZUB1 1445 aa23.55■■□□□ 1.36
GSE1-206ENST00000438180 STAC3Q96MF2 364 aa23.55■■□□□ 1.36
GSE1-206ENST00000438180 PRAG1Q86YV5 1406 aa23.54■■□□□ 1.36
GSE1-206ENST00000438180 YEATS2Q9ULM3 1422 aa23.54■■□□□ 1.36
GSE1-206ENST00000438180 DDX10Q13206 875 aaKnown RBP23.54■■□□□ 1.36
GSE1-206ENST00000438180 REREQ9P2R6 1566 aa23.54■■□□□ 1.36
GSE1-206ENST00000438180 ABCC3O15438 1527 aa23.54■■□□□ 1.36
GSE1-206ENST00000438180 KDM2AQ9Y2K7 1162 aa23.53■■□□□ 1.36
GSE1-206ENST00000438180 POLR1AO95602 1720 aaPredicted RBP23.53■■□□□ 1.36
GSE1-206ENST00000438180 RGL3Q3MIN7 710 aa23.53■■□□□ 1.36
GSE1-206ENST00000438180 GGT6Q6P531 493 aa23.53■■□□□ 1.36
GSE1-206ENST00000438180 TRPM1Q7Z4N2 1603 aa23.52■■□□□ 1.36
GSE1-206ENST00000438180 USP47Q96K76 1375 aa23.51■■□□□ 1.35
GSE1-206ENST00000438180 WASHC2CQ9Y4E1 1318 aa23.51■■□□□ 1.35
GSE1-206ENST00000438180 CAMSAP1Q5T5Y3 1602 aa23.5■■□□□ 1.35
GSE1-206ENST00000438180 KIF1BO60333 1816 aa23.5■■□□□ 1.35
GSE1-206ENST00000438180 LAMC1P11047 1609 aa23.48■■□□□ 1.35
GSE1-206ENST00000438180 CARD11Q9BXL7 1154 aa23.47■■□□□ 1.35
GSE1-206ENST00000438180 ROCK2O75116 1388 aaKnown RBP23.47■■□□□ 1.35
GSE1-206ENST00000438180 CNTLNQ9NXG0 1405 aa23.47■■□□□ 1.35
GSE1-206ENST00000438180 NPATQ14207 1427 aa23.46■■□□□ 1.35
GSE1-206ENST00000438180 AGLP35573 1532 aa23.46■■□□□ 1.35
GSE1-206ENST00000438180 ARHGAP31Q2M1Z3 1444 aa23.44■■□□□ 1.34
GSE1-206ENST00000438180 WASHC2AQ641Q2 1341 aa23.44■■□□□ 1.34
GSE1-206ENST00000438180 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
GSE1-206ENST00000438180 ARHGEF40Q8TER5 1519 aa23.43■■□□□ 1.34
GSE1-206ENST00000438180 CCDC7Q96M83 1385 aa23.43■■□□□ 1.34
GSE1-206ENST00000438180 ARID4BQ4LE39 1312 aaPredicted RBP23.41■■□□□ 1.34
GSE1-206ENST00000438180 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
GSE1-206ENST00000438180 MADDQ8WXG6 1647 aa23.41■■□□□ 1.34
GSE1-206ENST00000438180 ANP32CO43423 234 aa23.38■■□□□ 1.33
GSE1-206ENST00000438180 NOS1P29475 1434 aa23.38■■□□□ 1.33
GSE1-206ENST00000438180 UGGT1Q9NYU2 1555 aa23.38■■□□□ 1.33
GSE1-206ENST00000438180 ADGRB3O60242 1522 aa23.37■■□□□ 1.33
GSE1-206ENST00000438180 CENPBP07199 599 aaPredicted RBP23.37■■□□□ 1.33
GSE1-206ENST00000438180 MYOM2P54296 1465 aa23.37■■□□□ 1.33
GSE1-206ENST00000438180 KIAA1210Q9ULL0 1709 aa23.35■■□□□ 1.33
GSE1-206ENST00000438180 IFT172Q9UG01 1749 aa23.35■■□□□ 1.33
GSE1-206ENST00000438180 COL17A1Q9UMD9 1497 aaPredicted RBP23.35■■□□□ 1.33
GSE1-206ENST00000438180 CFAP65Q6ZU64 1925 aaKnown RBP23.34■■□□□ 1.33
GSE1-206ENST00000438180 KIF7Q2M1P5 1343 aa23.34■■□□□ 1.33
GSE1-206ENST00000438180 MROH2AA6NES4 1674 aa23.33■■□□□ 1.33
GSE1-206ENST00000438180 PIK3C2BO00750 1634 aa23.33■■□□□ 1.33
GSE1-206ENST00000438180 SIGLEC1Q9BZZ2 1709 aa23.33■■□□□ 1.32
GSE1-206ENST00000438180 C11orf95C9JLR9 678 aaPredicted RBP23.3■■□□□ 1.32
GSE1-206ENST00000438180 SYNMO15061 1565 aa23.3■■□□□ 1.32
GSE1-206ENST00000438180 PREX1Q8TCU6 1659 aa23.29■■□□□ 1.32
GSE1-206ENST00000438180 RPGRIP1LQ68CZ1 1315 aa23.29■■□□□ 1.32
GSE1-206ENST00000438180 ST20-MTHFSA0A0A6YYL1 179 aa23.28■■□□□ 1.32
GSE1-206ENST00000438180 NBPF1Q3BBV0 1214 aa23.28■■□□□ 1.32
GSE1-206ENST00000438180 CCER2I3L3R5 266 aa23.28■■□□□ 1.32
GSE1-206ENST00000438180 SLC52A1Q9NWF4 448 aa23.27■■□□□ 1.32
GSE1-206ENST00000438180 PPLO60437 1756 aa23.26■■□□□ 1.31
GSE1-206ENST00000438180 NRXN1Q9ULB1 1477 aa23.25■■□□□ 1.31
GSE1-206ENST00000438180 IQGAP1P46940 1657 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms