RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 IRX5P78411 483 aaPredicted RBP10.55□□□□□ -0.72
SPEN-202ENST00000438066 OCEL1Q9H607 264 aa10.55□□□□□ -0.72
SPEN-202ENST00000438066 UNC13AQ9UPW8 1703 aa10.55□□□□□ -0.72
SPEN-202ENST00000438066 CLCN1P35523 988 aa10.55□□□□□ -0.72
SPEN-202ENST00000438066 MDM2Q00987 491 aaPredicted RBP10.55□□□□□ -0.72
SPEN-202ENST00000438066 NECTIN2Q92692 538 aa10.55□□□□□ -0.72
SPEN-202ENST00000438066 PROSER2Q86WR7 435 aaPredicted RBP10.54□□□□□ -0.72
SPEN-202ENST00000438066 CDHR5Q9HBB8 845 aa10.54□□□□□ -0.72
SPEN-202ENST00000438066 TMEM92Q6UXU6 159 aa10.53□□□□□ -0.72
SPEN-202ENST00000438066 POM121Q96HA1 1249 aa10.53□□□□□ -0.72
SPEN-202ENST00000438066 TMUB1Q9BVT8 246 aa10.53□□□□□ -0.72
SPEN-202ENST00000438066 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
SPEN-202ENST00000438066 ATN1P54259 1190 aaPredicted RBP10.53□□□□□ -0.72
SPEN-202ENST00000438066 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
SPEN-202ENST00000438066 SSTR3P32745 418 aaPredicted RBP10.52□□□□□ -0.73
SPEN-202ENST00000438066 SKIV2LQ15477 1246 aaKnown RBP10.52□□□□□ -0.73
SPEN-202ENST00000438066 PROCA1Q8NCQ7 364 aaPredicted RBP10.52□□□□□ -0.73
SPEN-202ENST00000438066 NPDC1Q9NQX5 325 aaPredicted RBP10.51□□□□□ -0.73
SPEN-202ENST00000438066 BEGAINQ9BUH8 593 aa10.5□□□□□ -0.73
SPEN-202ENST00000438066 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
SPEN-202ENST00000438066 CCDC9Q9Y3X0 531 aaKnown RBP10.5□□□□□ -0.73
SPEN-202ENST00000438066 RAD21O60216 631 aa10.5□□□□□ -0.73
SPEN-202ENST00000438066 MAP3K7O43318 606 aa10.48□□□□□ -0.73
SPEN-202ENST00000438066 FNBP4Q8N3X1 1017 aaPredicted RBP10.48□□□□□ -0.73
SPEN-202ENST00000438066 CCDC97Q96F63 343 aaPredicted RBP10.47□□□□□ -0.73
SPEN-202ENST00000438066 EN1Q05925 392 aaPredicted RBP10.47□□□□□ -0.73
SPEN-202ENST00000438066 PLCG2P16885 1265 aa10.46□□□□□ -0.74
SPEN-202ENST00000438066 NLRP7Q8WX94 980 aa10.46□□□□□ -0.74
SPEN-202ENST00000438066 RBM33Q96EV2 1170 aaKnown RBP10.46□□□□□ -0.74
SPEN-202ENST00000438066 FAM161AQ3B820 660 aa10.45□□□□□ -0.74
SPEN-202ENST00000438066 IER5LQ5T953 404 aa10.45□□□□□ -0.74
SPEN-202ENST00000438066 SERPINA10Q9UK55 444 aa10.45□□□□□ -0.74
SPEN-202ENST00000438066 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
SPEN-202ENST00000438066 TSR1Q2NL82 804 aaKnown RBP10.44□□□□□ -0.74
SPEN-202ENST00000438066 FAM217BQ9NTX9 383 aaPredicted RBP10.44□□□□□ -0.74
SPEN-202ENST00000438066 ATMINO43313 823 aaPredicted RBP10.43□□□□□ -0.74
SPEN-202ENST00000438066 PTCD2Q8WV60 388 aaKnown RBP10.43□□□□□ -0.74
SPEN-202ENST00000438066 ANO8Q9HCE9 1232 aaPredicted RBP10.42□□□□□ -0.74
SPEN-202ENST00000438066 PHF14O94880 888 aa10.41□□□□□ -0.74
SPEN-202ENST00000438066 MYSM1Q5VVJ2 828 aa10.41□□□□□ -0.74
SPEN-202ENST00000438066 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.41□□□□□ -0.74
SPEN-202ENST00000438066 COG6Q9Y2V7 657 aa10.41□□□□□ -0.74
SPEN-202ENST00000438066 RSF1Q96T23 1441 aaPredicted RBP10.41□□□□□ -0.74
SPEN-202ENST00000438066 EPAS1Q99814 870 aa10.41□□□□□ -0.74
SPEN-202ENST00000438066 SPDYE5A6NIY4 337 aa10.4□□□□□ -0.74
SPEN-202ENST00000438066 METTL3Q86U44 580 aaKnown RBP10.4□□□□□ -0.74
SPEN-202ENST00000438066 BICRAQ9NZM4 1560 aa10.39□□□□□ -0.75
SPEN-202ENST00000438066 TRAIPQ9BWF2 469 aa10.39□□□□□ -0.75
SPEN-202ENST00000438066 SNRKQ9NRH2 765 aa10.39□□□□□ -0.75
SPEN-202ENST00000438066 CLK2P49760 499 aaKnown RBP10.38□□□□□ -0.75
SPEN-202ENST00000438066 ASTLQ6HA08 431 aaPredicted RBP10.38□□□□□ -0.75
SPEN-202ENST00000438066 KCTD17Q8N5Z5 321 aa10.38□□□□□ -0.75
SPEN-202ENST00000438066 PLSCR2Q9NRY7 297 aa10.38□□□□□ -0.75
SPEN-202ENST00000438066 PCDHGA10Q9Y5H3 936 aa10.38□□□□□ -0.75
SPEN-202ENST00000438066 AEBP1Q8IUX7 1158 aa10.38□□□□□ -0.75
SPEN-202ENST00000438066 CECR2Q9BXF3 1484 aa10.38□□□□□ -0.75
SPEN-202ENST00000438066 SLAIN1Q8ND83 568 aa10.37□□□□□ -0.75
SPEN-202ENST00000438066 ZNF330Q9Y3S2 320 aaPredicted RBP10.37□□□□□ -0.75
SPEN-202ENST00000438066 RFC5P40937 340 aa10.36□□□□□ -0.75
SPEN-202ENST00000438066 OATP04181 439 aa10.36□□□□□ -0.75
SPEN-202ENST00000438066 TBC1D2Q9BYX2 928 aa10.35□□□□□ -0.75
SPEN-202ENST00000438066 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
SPEN-202ENST00000438066 FBXO31Q5XUX0 539 aaPredicted RBP10.34□□□□□ -0.75
SPEN-202ENST00000438066 RETREG2Q8NC44 543 aa10.34□□□□□ -0.75
SPEN-202ENST00000438066 PXYLP1Q8TE99 480 aa10.34□□□□□ -0.75
SPEN-202ENST00000438066 SEC24BO95487 1268 aa10.33□□□□□ -0.76
SPEN-202ENST00000438066 TYW1BQ6NUM6 668 aa10.33□□□□□ -0.76
SPEN-202ENST00000438066 PADI6Q6TGC4 694 aa10.33□□□□□ -0.76
SPEN-202ENST00000438066 BANK1Q8NDB2 785 aa10.33□□□□□ -0.76
SPEN-202ENST00000438066 BAZ1AQ9NRL2 1556 aaPredicted RBP10.33□□□□□ -0.76
SPEN-202ENST00000438066 SLC34A2O95436 690 aa10.32□□□□□ -0.76
SPEN-202ENST00000438066 COLQQ9Y215 455 aaPredicted RBP10.32□□□□□ -0.76
SPEN-202ENST00000438066 ADGRG1Q9Y653 693 aa10.32□□□□□ -0.76
SPEN-202ENST00000438066 CLCN6P51797 869 aa10.3□□□□□ -0.76
SPEN-202ENST00000438066 GDPD2Q9HCC8 539 aa10.3□□□□□ -0.76
SPEN-202ENST00000438066 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
SPEN-202ENST00000438066 SMARCA4P51532 1647 aa10.29□□□□□ -0.76
SPEN-202ENST00000438066 FBXW7Q969H0 707 aa10.29□□□□□ -0.76
SPEN-202ENST00000438066 WIZO95785 1651 aa10.28□□□□□ -0.76
SPEN-202ENST00000438066 DIXDC1Q155Q3 683 aa10.28□□□□□ -0.76
SPEN-202ENST00000438066 TMEM259Q4ZIN3 620 aa10.28□□□□□ -0.76
SPEN-202ENST00000438066 EVX2Q03828 476 aa10.27□□□□□ -0.76
SPEN-202ENST00000438066 C3orf67Q6ZVT6 689 aa10.27□□□□□ -0.76
SPEN-202ENST00000438066 MTMR14Q8NCE2 650 aa10.27□□□□□ -0.76
SPEN-202ENST00000438066 HAX1O00165 279 aa10.26□□□□□ -0.77
SPEN-202ENST00000438066 C6orf132Q5T0Z8 1188 aa10.26□□□□□ -0.77
SPEN-202ENST00000438066 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
SPEN-202ENST00000438066 CERKQ8TCT0 537 aa10.26□□□□□ -0.77
SPEN-202ENST00000438066 JPH4Q96JJ6 628 aa10.26□□□□□ -0.77
SPEN-202ENST00000438066 ABL2P42684 1182 aa10.25□□□□□ -0.77
SPEN-202ENST00000438066 IRF5Q13568 498 aa10.25□□□□□ -0.77
SPEN-202ENST00000438066 PPP2R2DQ66LE6 453 aa10.25□□□□□ -0.77
SPEN-202ENST00000438066 CALR3Q96L12 384 aaKnown RBP10.25□□□□□ -0.77
SPEN-202ENST00000438066 PCDHGA4Q9Y5G9 962 aa10.25□□□□□ -0.77
SPEN-202ENST00000438066 CSPP1Q1MSJ5 1256 aa10.24□□□□□ -0.77
SPEN-202ENST00000438066 SPIRE2Q8WWL2 714 aa10.24□□□□□ -0.77
SPEN-202ENST00000438066 WWC1Q8IX03 1113 aa10.23□□□□□ -0.77
SPEN-202ENST00000438066 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
SPEN-202ENST00000438066 TTC13Q8NBP0 860 aa10.22□□□□□ -0.77
SPEN-202ENST00000438066 POM121CA8CG34 1229 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms