RNA–Protein interactions for RNA: ENST00000437111.1

SHQ1P1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor pseudogene 1, humanhuman

BASIC

Gene SHQ1P1, Length 1,544 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1P1-201ENST00000437111 CPS1P31327 1500 aa9.5□□□□□ -0.89
SHQ1P1-201ENST00000437111 ALKQ9UM73 1620 aa9.5□□□□□ -0.89
SHQ1P1-201ENST00000437111 CDC42BPBQ9Y5S2 1711 aa9.5□□□□□ -0.89
SHQ1P1-201ENST00000437111 SUPT6HQ7KZ85 1726 aaKnown RBP9.49□□□□□ -0.89
SHQ1P1-201ENST00000437111 RGS17Q9UGC6 210 aaPredicted RBP9.49□□□□□ -0.89
SHQ1P1-201ENST00000437111 ITSN2Q9NZM3 1697 aa9.49□□□□□ -0.89
SHQ1P1-201ENST00000437111 SHANK2Q9UPX8 1470 aa9.48□□□□□ -0.89
SHQ1P1-201ENST00000437111 CLTCQ00610 1675 aaKnown RBP9.48□□□□□ -0.89
SHQ1P1-201ENST00000437111 PPARGC1BQ86YN6 1023 aaKnown RBP9.46□□□□□ -0.89
SHQ1P1-201ENST00000437111 CCER1Q8TC90 406 aaPredicted RBP9.46□□□□□ -0.89
SHQ1P1-201ENST00000437111 FMN1Q68DA7 1419 aa9.46□□□□□ -0.89
SHQ1P1-201ENST00000437111 SAMD9LQ8IVG5 1584 aa9.46□□□□□ -0.89
SHQ1P1-201ENST00000437111 NEURL4Q96JN8 1562 aa9.46□□□□□ -0.89
SHQ1P1-201ENST00000437111 A2ML1A8K2U0 1454 aa9.46□□□□□ -0.9
SHQ1P1-201ENST00000437111 DNMT1P26358 1616 aaKnown RBP9.46□□□□□ -0.9
SHQ1P1-201ENST00000437111 PREX2Q70Z35 1606 aa9.46□□□□□ -0.9
SHQ1P1-201ENST00000437111 MAP3K1Q13233 1512 aa9.46□□□□□ -0.9
SHQ1P1-201ENST00000437111 VWDEQ8N2E2 1590 aa9.44□□□□□ -0.9
SHQ1P1-201ENST00000437111 GGT6Q6P531 493 aa9.44□□□□□ -0.9
SHQ1P1-201ENST00000437111 ARHGAP35Q9NRY4 1499 aa9.44□□□□□ -0.9
SHQ1P1-201ENST00000437111 SPAG9O60271 1321 aaKnown RBP9.44□□□□□ -0.9
SHQ1P1-201ENST00000437111 PLXNC1O60486 1568 aa9.43□□□□□ -0.9
SHQ1P1-201ENST00000437111 POLR1AO95602 1720 aaPredicted RBP9.42□□□□□ -0.9
SHQ1P1-201ENST00000437111 LRRIQ1Q96JM4 1722 aa9.42□□□□□ -0.9
SHQ1P1-201ENST00000437111 SAMD1Q6SPF0 538 aaPredicted RBP9.42□□□□□ -0.9
SHQ1P1-201ENST00000437111 TIAM1Q13009 1591 aa9.42□□□□□ -0.9
SHQ1P1-201ENST00000437111 A2MP01023 1474 aa9.42□□□□□ -0.9
SHQ1P1-201ENST00000437111 HNRNPMP52272 730 aaKnown RBP eCLIP9.41□□□□□ -0.9
SHQ1P1-201ENST00000437111 SYCP2Q9BX26 1530 aa9.41□□□□□ -0.9
SHQ1P1-201ENST00000437111 POTEAQ6S8J7 498 aa9.41□□□□□ -0.9
SHQ1P1-201ENST00000437111 SPINK5Q9NQ38 1064 aaPredicted RBP9.41□□□□□ -0.9
SHQ1P1-201ENST00000437111 ZNF777Q9ULD5 760 aaPredicted RBP9.41□□□□□ -0.9
SHQ1P1-201ENST00000437111 ATP7AQ04656 1500 aa9.4□□□□□ -0.9
SHQ1P1-201ENST00000437111 CDC42BPAQ5VT25 1732 aa9.4□□□□□ -0.9
SHQ1P1-201ENST00000437111 ANKLE2Q86XL3 938 aa9.4□□□□□ -0.91
SHQ1P1-201ENST00000437111 ATF5Q9Y2D1 282 aaPredicted RBP9.4□□□□□ -0.91
SHQ1P1-201ENST00000437111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.4□□□□□ -0.91
SHQ1P1-201ENST00000437111 LRRC7Q96NW7 1537 aa9.39□□□□□ -0.91
SHQ1P1-201ENST00000437111 FBXO31Q5XUX0 539 aaPredicted RBP9.39□□□□□ -0.91
SHQ1P1-201ENST00000437111 TNRQ92752 1358 aa9.39□□□□□ -0.91
SHQ1P1-201ENST00000437111 NPHP4O75161 1426 aaPredicted RBP9.39□□□□□ -0.91
SHQ1P1-201ENST00000437111 MED14O60244 1454 aa9.39□□□□□ -0.91
SHQ1P1-201ENST00000437111 FYCO1Q9BQS8 1478 aa9.39□□□□□ -0.91
SHQ1P1-201ENST00000437111 INO80Q9ULG1 1556 aaPredicted RBP9.39□□□□□ -0.91
SHQ1P1-201ENST00000437111 STRCP1A6NGW2 1772 aa9.37□□□□□ -0.91
SHQ1P1-201ENST00000437111 RNF17Q9BXT8 1623 aaKnown RBP9.37□□□□□ -0.91
SHQ1P1-201ENST00000437111 RRBP1Q9P2E9 1410 aaKnown RBP9.37□□□□□ -0.91
SHQ1P1-201ENST00000437111 THEMISQ8N1K5 641 aaPredicted RBP9.36□□□□□ -0.91
SHQ1P1-201ENST00000437111 DEPDC5O75140 1603 aa9.36□□□□□ -0.91
SHQ1P1-201ENST00000437111 GPATCH8Q9UKJ3 1502 aaKnown RBP9.36□□□□□ -0.91
SHQ1P1-201ENST00000437111 KIAA1107Q9UPP5 1409 aa9.36□□□□□ -0.91
SHQ1P1-201ENST00000437111 ATXN8OSP0DMR3 200 aa9.36□□□□□ -0.91
SHQ1P1-201ENST00000437111 PZPP20742 1482 aa9.34□□□□□ -0.91
SHQ1P1-201ENST00000437111 CCDC18Q5T9S5 1454 aa9.34□□□□□ -0.91
SHQ1P1-201ENST00000437111 SYNMO15061 1565 aa9.34□□□□□ -0.91
SHQ1P1-201ENST00000437111 UGGT1Q9NYU2 1555 aa9.34□□□□□ -0.91
SHQ1P1-201ENST00000437111 IQGAP1P46940 1657 aa9.34□□□□□ -0.91
SHQ1P1-201ENST00000437111 MIA2Q96PC5 1412 aa9.34□□□□□ -0.91
SHQ1P1-201ENST00000437111 FAM135AQ9P2D6 1515 aa9.33□□□□□ -0.92
SHQ1P1-201ENST00000437111 SETD1AO15047 1707 aaKnown RBP9.33□□□□□ -0.92
SHQ1P1-201ENST00000437111 PLEKHH2Q8IVE3 1493 aa9.33□□□□□ -0.92
SHQ1P1-201ENST00000437111 NLRP1Q9C000 1473 aa9.33□□□□□ -0.92
SHQ1P1-201ENST00000437111 ADGBQ8N7X0 1667 aa9.33□□□□□ -0.92
SHQ1P1-201ENST00000437111 CASKIN1Q8WXD9 1431 aa9.33□□□□□ -0.92
SHQ1P1-201ENST00000437111 CLSPNQ9HAW4 1339 aa9.32□□□□□ -0.92
SHQ1P1-201ENST00000437111 CFDP1Q9UEE9 299 aaPredicted RBP9.32□□□□□ -0.92
SHQ1P1-201ENST00000437111 DHX29Q7Z478 1369 aaKnown RBP9.32□□□□□ -0.92
SHQ1P1-201ENST00000437111 LRRC9Q6ZRR7 1453 aa9.32□□□□□ -0.92
SHQ1P1-201ENST00000437111 CCNB3Q8WWL7 1395 aa9.31□□□□□ -0.92
SHQ1P1-201ENST00000437111 KDM5DQ9BY66 1539 aa9.31□□□□□ -0.92
SHQ1P1-201ENST00000437111 FAM135BQ49AJ0 1406 aa9.31□□□□□ -0.92
SHQ1P1-201ENST00000437111 KIF3BO15066 747 aa9.31□□□□□ -0.92
SHQ1P1-201ENST00000437111 CAPN15O75808 1086 aa9.31□□□□□ -0.92
SHQ1P1-201ENST00000437111 ZNF644Q9H582 1327 aaPredicted RBP9.29□□□□□ -0.92
SHQ1P1-201ENST00000437111 WASHC2CQ9Y4E1 1318 aa9.29□□□□□ -0.92
SHQ1P1-201ENST00000437111 ZC3H13Q5T200 1668 aaKnown RBP9.29□□□□□ -0.92
SHQ1P1-201ENST00000437111 RTEL1-TNFRSF6BF6WH68 1400 aa9.29□□□□□ -0.92
SHQ1P1-201ENST00000437111 UPF1Q92900 1129 aaKnown RBP eCLIP9.29□□□□□ -0.92
SHQ1P1-201ENST00000437111 XIRP1Q702N8 1843 aaKnown RBP9.28□□□□□ -0.92
SHQ1P1-201ENST00000437111 MBD5Q9P267 1494 aa9.28□□□□□ -0.92
SHQ1P1-201ENST00000437111 EHBP1L1Q8N3D4 1523 aa9.28□□□□□ -0.92
SHQ1P1-201ENST00000437111 SCAF11Q99590 1463 aaKnown RBP9.25□□□□□ -0.93
SHQ1P1-201ENST00000437111 LTKP29376 864 aa9.25□□□□□ -0.93
SHQ1P1-201ENST00000437111 ROBO1Q9Y6N7 1651 aa9.24□□□□□ -0.93
SHQ1P1-201ENST00000437111 TMEM94Q12767 1356 aa9.23□□□□□ -0.93
SHQ1P1-201ENST00000437111 DSG3P32926 999 aa9.23□□□□□ -0.93
SHQ1P1-201ENST00000437111 ERVK-7P63135 1459 aa9.23□□□□□ -0.93
SHQ1P1-201ENST00000437111 NCOA2Q15596 1464 aa9.23□□□□□ -0.93
SHQ1P1-201ENST00000437111 ARHGAP23Q9P227 1491 aa9.23□□□□□ -0.93
SHQ1P1-201ENST00000437111 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
SHQ1P1-201ENST00000437111 TXNDC2Q86VQ3 553 aa9.22□□□□□ -0.93
SHQ1P1-201ENST00000437111 TRIM52Q96A61 297 aa9.22□□□□□ -0.93
SHQ1P1-201ENST00000437111 ZNF219Q9P2Y4 722 aaPredicted RBP9.22□□□□□ -0.93
SHQ1P1-201ENST00000437111 UBR1Q8IWV7 1749 aa9.22□□□□□ -0.93
SHQ1P1-201ENST00000437111 JCADQ9P266 1359 aa9.21□□□□□ -0.94
SHQ1P1-201ENST00000437111 CCDC141Q6ZP82 1450 aa9.21□□□□□ -0.94
SHQ1P1-201ENST00000437111 ABCC3O15438 1527 aa9.21□□□□□ -0.94
SHQ1P1-201ENST00000437111 SLIT1O75093 1534 aa9.21□□□□□ -0.94
SHQ1P1-201ENST00000437111 RBM33Q96EV2 1170 aaKnown RBP9.21□□□□□ -0.94
SHQ1P1-201ENST00000437111 MTUS2Q5JR59 1369 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms