RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 ARHGEF5Q12774 1597 aa14.01□□□□□ -0.17
CTDSPL-205ENST00000436654 SETD1BQ9UPS6 1966 aaKnown RBP14.01□□□□□ -0.17
CTDSPL-205ENST00000436654 MAP3K1Q13233 1512 aa14□□□□□ -0.17
CTDSPL-205ENST00000436654 MYOM3Q5VTT5 1437 aa14□□□□□ -0.17
CTDSPL-205ENST00000436654 APLP2Q06481 763 aa14□□□□□ -0.17
CTDSPL-205ENST00000436654 MYO3AQ8NEV4 1616 aa13.99□□□□□ -0.17
CTDSPL-205ENST00000436654 CEP170BQ9Y4F5 1589 aaPredicted RBP13.99□□□□□ -0.17
CTDSPL-205ENST00000436654 TNRQ92752 1358 aa13.98□□□□□ -0.17
CTDSPL-205ENST00000436654 PKD2Q13563 968 aa13.98□□□□□ -0.17
CTDSPL-205ENST00000436654 KDM5DQ9BY66 1539 aa13.98□□□□□ -0.17
CTDSPL-205ENST00000436654 MIA2Q96PC5 1412 aa13.98□□□□□ -0.17
CTDSPL-205ENST00000436654 LTBP4Q8N2S1 1624 aa13.97□□□□□ -0.17
CTDSPL-205ENST00000436654 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
CTDSPL-205ENST00000436654 A2ML1A8K2U0 1454 aa13.96□□□□□ -0.17
CTDSPL-205ENST00000436654 PZPP20742 1482 aa13.96□□□□□ -0.17
CTDSPL-205ENST00000436654 PLA2R1Q13018 1463 aa13.96□□□□□ -0.17
CTDSPL-205ENST00000436654 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
CTDSPL-205ENST00000436654 TCOF1Q13428 1488 aaKnown RBP13.94□□□□□ -0.18
CTDSPL-205ENST00000436654 MAST1Q9Y2H9 1570 aa13.93□□□□□ -0.18
CTDSPL-205ENST00000436654 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
CTDSPL-205ENST00000436654 RRP7BPQ9NSQ0 103 aa13.92□□□□□ -0.18
CTDSPL-205ENST00000436654 ABCC5O15440 1437 aa13.91□□□□□ -0.18
CTDSPL-205ENST00000436654 DNMT1P26358 1616 aaKnown RBP13.91□□□□□ -0.18
CTDSPL-205ENST00000436654 KIF15Q9NS87 1388 aa13.91□□□□□ -0.18
CTDSPL-205ENST00000436654 ABCC3O15438 1527 aa13.9□□□□□ -0.18
CTDSPL-205ENST00000436654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
CTDSPL-205ENST00000436654 THEMISQ8N1K5 641 aaPredicted RBP13.89□□□□□ -0.19
CTDSPL-205ENST00000436654 CHIC2Q9UKJ5 165 aa13.89□□□□□ -0.19
CTDSPL-205ENST00000436654 RNF17Q9BXT8 1623 aaKnown RBP13.89□□□□□ -0.19
CTDSPL-205ENST00000436654 DUOX2Q9NRD8 1548 aa13.89□□□□□ -0.19
CTDSPL-205ENST00000436654 FGD6Q6ZV73 1430 aa13.89□□□□□ -0.19
CTDSPL-205ENST00000436654 NLRP1Q9C000 1473 aa13.88□□□□□ -0.19
CTDSPL-205ENST00000436654 ANKLE2Q86XL3 938 aa13.88□□□□□ -0.19
CTDSPL-205ENST00000436654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.194e-9■□□□□ 9.6
CTDSPL-205ENST00000436654 PTPN23Q9H3S7 1636 aa13.88□□□□□ -0.19
CTDSPL-205ENST00000436654 DAPK1P53355 1430 aa13.88□□□□□ -0.19
CTDSPL-205ENST00000436654 UBAP1LF5GYI3 381 aa13.87□□□□□ -0.19
CTDSPL-205ENST00000436654 SHANK2Q9UPX8 1470 aa13.87□□□□□ -0.19
CTDSPL-205ENST00000436654 UGGT1Q9NYU2 1555 aa13.86□□□□□ -0.19
CTDSPL-205ENST00000436654 ERVK-7P63135 1459 aa13.86□□□□□ -0.19
CTDSPL-205ENST00000436654 MROH1Q8NDA8 1641 aa13.86□□□□□ -0.19
CTDSPL-205ENST00000436654 EIF2AK4Q9P2K8 1649 aaKnown RBP13.86□□□□□ -0.19
CTDSPL-205ENST00000436654 MED1Q15648 1581 aaPredicted RBP13.84□□□□□ -0.19
CTDSPL-205ENST00000436654 NEURL4Q96JN8 1562 aa13.84□□□□□ -0.19
CTDSPL-205ENST00000436654 ERBINQ96RT1 1412 aa13.84□□□□□ -0.19
CTDSPL-205ENST00000436654 FAM50AQ14320 339 aaKnown RBP13.84□□□□□ -0.19
CTDSPL-205ENST00000436654 ANKRD30AQ9BXX3 1397 aa13.83□□□□□ -0.2
CTDSPL-205ENST00000436654 NPHP4O75161 1426 aaPredicted RBP13.82□□□□□ -0.2
CTDSPL-205ENST00000436654 ZC3H13Q5T200 1668 aaKnown RBP13.82□□□□□ -0.2
CTDSPL-205ENST00000436654 KANK1Q14678 1352 aa13.81□□□□□ -0.2
CTDSPL-205ENST00000436654 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
CTDSPL-205ENST00000436654 CROCC2H7BZ55 1655 aa13.8□□□□□ -0.2
CTDSPL-205ENST00000436654 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
CTDSPL-205ENST00000436654 ARHGAP31Q2M1Z3 1444 aa13.79□□□□□ -0.2
CTDSPL-205ENST00000436654 MED14O60244 1454 aa13.79□□□□□ -0.2
CTDSPL-205ENST00000436654 CEP152O94986 1710 aa13.78□□□□□ -0.2
CTDSPL-205ENST00000436654 POLR1AO95602 1720 aaPredicted RBP13.78□□□□□ -0.2
CTDSPL-205ENST00000436654 PIP4K2BP78356 416 aa13.77□□□□□ -0.21
CTDSPL-205ENST00000436654 VWDEQ8N2E2 1590 aa13.76□□□□□ -0.21
CTDSPL-205ENST00000436654 CPS1P31327 1500 aa13.76□□□□□ -0.21
CTDSPL-205ENST00000436654 LTKP29376 864 aa13.76□□□□□ -0.21
CTDSPL-205ENST00000436654 TXNDC2Q86VQ3 553 aa13.76□□□□□ -0.21
CTDSPL-205ENST00000436654 DEPDC5O75140 1603 aa13.75□□□□□ -0.21
CTDSPL-205ENST00000436654 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
CTDSPL-205ENST00000436654 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
CTDSPL-205ENST00000436654 TOM1O60784 492 aa13.74□□□□□ -0.21
CTDSPL-205ENST00000436654 PPARGC1BQ86YN6 1023 aaKnown RBP13.74□□□□□ -0.21
CTDSPL-205ENST00000436654 SCAF11Q99590 1463 aaKnown RBP13.74□□□□□ -0.21
CTDSPL-205ENST00000436654 IDI1Q13907 227 aa13.73□□□□□ -0.21
CTDSPL-205ENST00000436654 EID1Q9Y6B2 187 aa13.73□□□□□ -0.21
CTDSPL-205ENST00000436654 ANKRD50Q9ULJ7 1429 aa13.73□□□□□ -0.21
CTDSPL-205ENST00000436654 IQGAP1P46940 1657 aa13.72□□□□□ -0.21
CTDSPL-205ENST00000436654 PHF23Q9BUL5 403 aaPredicted RBP13.72□□□□□ -0.21
CTDSPL-205ENST00000436654 LMTK2Q8IWU2 1503 aa13.72□□□□□ -0.21
CTDSPL-205ENST00000436654 ARHGAP23Q9P227 1491 aa13.72□□□□□ -0.21
CTDSPL-205ENST00000436654 TMEM2Q9UHN6 1383 aa13.71□□□□□ -0.21
CTDSPL-205ENST00000436654 UBR1Q8IWV7 1749 aa13.71□□□□□ -0.21
CTDSPL-205ENST00000436654 HSPA1LP34931 641 aa13.71□□□□□ -0.21
CTDSPL-205ENST00000436654 SLIT1O75093 1534 aa13.7□□□□□ -0.22
CTDSPL-205ENST00000436654 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
CTDSPL-205ENST00000436654 ITGAEP38570 1179 aa13.69□□□□□ -0.22
CTDSPL-205ENST00000436654 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
CTDSPL-205ENST00000436654 EFCAB6Q5THR3 1501 aa13.69□□□□□ -0.22
CTDSPL-205ENST00000436654 LRRC7Q96NW7 1537 aa13.69□□□□□ -0.22
CTDSPL-205ENST00000436654 NOS1P29475 1434 aa13.68□□□□□ -0.22
CTDSPL-205ENST00000436654 SYNMO15061 1565 aa13.67□□□□□ -0.22
CTDSPL-205ENST00000436654 SLC26A8Q96RN1 970 aa13.66□□□□□ -0.22
CTDSPL-205ENST00000436654 SLC52A1Q9NWF4 448 aa13.66□□□□□ -0.22
CTDSPL-205ENST00000436654 CFAP65Q6ZU64 1925 aaKnown RBP13.65□□□□□ -0.22
CTDSPL-205ENST00000436654 ALKQ9UM73 1620 aa13.64□□□□□ -0.23
CTDSPL-205ENST00000436654 BCANQ96GW7 911 aa13.64□□□□□ -0.23
CTDSPL-205ENST00000436654 ADGRB3O60242 1522 aa13.64□□□□□ -0.23
CTDSPL-205ENST00000436654 STRCP1A6NGW2 1772 aa13.63□□□□□ -0.23
CTDSPL-205ENST00000436654 ROCK1Q13464 1354 aa13.63□□□□□ -0.23
CTDSPL-205ENST00000436654 RPRD2Q5VT52 1461 aaKnown RBP13.62□□□□□ -0.23
CTDSPL-205ENST00000436654 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
CTDSPL-205ENST00000436654 PPP1R15AO75807 674 aaPredicted RBP13.61□□□□□ -0.23
CTDSPL-205ENST00000436654 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
CTDSPL-205ENST00000436654 NUP155O75694 1391 aa13.6□□□□□ -0.23
CTDSPL-205ENST00000436654 KCNA6P17658 529 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms