RNA–Protein interactions for RNA: ENST00000435991.2

TRAPPC13P1-201, Transcript of trafficking protein particle complex 13 pseudogene 1, humanhuman

BASIC

Gene TRAPPC13P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13P1-201ENST00000435991 COL9A1P20849 921 aa12.26□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 NBPF3Q9H094 633 aa12.26□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 E2F4Q16254 413 aa12.25□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 ARIH1Q9Y4X5 557 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 PLA2G2EQ9NZK7 142 aa12.24□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 RABGEF1Q9UJ41 708 aa12.24□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 C6orf132Q5T0Z8 1188 aa12.23□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 WDR70Q9NW82 654 aa12.23□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 PROX2Q3B8N5 592 aa12.22□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 DDX12PQ92771 950 aa12.22□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 GOLGA8CPA6NN73 597 aa12.21□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
TRAPPC13P1-201ENST00000435991 WNT2BQ93097 391 aa12.2□□□□□ -0.46
TRAPPC13P1-201ENST00000435991 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC13P1-201ENST00000435991 PTPN5P54829 565 aa12.17□□□□□ -0.46
TRAPPC13P1-201ENST00000435991 NBR1Q14596 966 aa12.17□□□□□ -0.46
TRAPPC13P1-201ENST00000435991 RBM33Q96EV2 1170 aaKnown RBP12.17□□□□□ -0.46
TRAPPC13P1-201ENST00000435991 LAPTM4BQ86VI4 370 aa12.16□□□□□ -0.46
TRAPPC13P1-201ENST00000435991 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
TRAPPC13P1-201ENST00000435991 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
TRAPPC13P1-201ENST00000435991 MAP3K7O43318 606 aa12.12□□□□□ -0.47
TRAPPC13P1-201ENST00000435991 TSR1Q2NL82 804 aaKnown RBP12.11□□□□□ -0.47
TRAPPC13P1-201ENST00000435991 ANKK1Q8NFD2 765 aa12.11□□□□□ -0.47
TRAPPC13P1-201ENST00000435991 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 ZFRQ96KR1 1074 aaKnown RBP12.07□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 TSHZ2Q9NRE2 1034 aa12.07□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 SOWAHBA6NEL2 793 aa12.06□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 GRXCR2A6NFK2 248 aa12.06□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 PRIM1P49642 420 aaKnown RBP12.06□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 FAM98CQ17RN3 349 aaKnown RBP12.05□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 CERKQ8TCT0 537 aa12.05□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 OSBPP22059 807 aa12.04□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 BCAMP50895 628 aa12.03□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 PACS2Q86VP3 889 aa12.03□□□□□ -0.48
TRAPPC13P1-201ENST00000435991 PRSS12P56730 875 aa12.01□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 CDCA7LQ96GN5 454 aa12.01□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 CDHR5Q9HBB8 845 aa11.97□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 FAM198AQ9UFP1 575 aa11.97□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 KCNV2Q8TDN2 545 aa11.96□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 LRCH3Q96II8 777 aa11.96□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC13P1-201ENST00000435991 ITGBL1O95965 494 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 TSR3Q9UJK0 312 aaKnown RBP11.94□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 NBPF26B4DH59 902 aa11.93□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 A0A0G2JS52 829 aa11.92□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 TATDN2Q93075 761 aa11.92□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 RGS20O76081 388 aa11.91□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 HPS5Q9UPZ3 1129 aa11.91□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 C3orf80F5H4A9 247 aa11.9□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 SMAPO00193 183 aa11.9□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 TTC13Q8NBP0 860 aa11.9□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 NPDC1Q9NQX5 325 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 PNMA3Q9UL41 463 aa11.9□□□□□ -0.5
TRAPPC13P1-201ENST00000435991 MLLT3P42568 568 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC13P1-201ENST00000435991 P3H3Q8IVL6 736 aa11.88□□□□□ -0.51
TRAPPC13P1-201ENST00000435991 SAMD7Q7Z3H4 446 aa11.87□□□□□ -0.51
TRAPPC13P1-201ENST00000435991 NUDT18Q6ZVK8 323 aa11.86□□□□□ -0.51
TRAPPC13P1-201ENST00000435991 PADI6Q6TGC4 694 aa11.85□□□□□ -0.51
TRAPPC13P1-201ENST00000435991 PPP4CP60510 307 aa11.84□□□□□ -0.51
TRAPPC13P1-201ENST00000435991 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
TRAPPC13P1-201ENST00000435991 KCNC4Q03721 635 aa11.83□□□□□ -0.52
TRAPPC13P1-201ENST00000435991 HDGFP51858 240 aaKnown RBP11.79□□□□□ -0.52
TRAPPC13P1-201ENST00000435991 PTGDRQ13258 359 aa11.78□□□□□ -0.52
TRAPPC13P1-201ENST00000435991 EYA1Q99502 592 aa11.77□□□□□ -0.53
TRAPPC13P1-201ENST00000435991 NECTIN2Q92692 538 aa11.75□□□□□ -0.53
TRAPPC13P1-201ENST00000435991 TJAP1Q5JTD0 557 aa11.74□□□□□ -0.53
TRAPPC13P1-201ENST00000435991 SWT1Q5T5J6 900 aaKnown RBP11.74□□□□□ -0.53
TRAPPC13P1-201ENST00000435991 SEMA3EO15041 775 aa11.73□□□□□ -0.53
TRAPPC13P1-201ENST00000435991 SLF2Q8IX21 1173 aa11.73□□□□□ -0.53
TRAPPC13P1-201ENST00000435991 RNF40O75150 1001 aa11.72□□□□□ -0.53
TRAPPC13P1-201ENST00000435991 NUTM2FA1L443 756 aa11.7□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 MTRQ99707 1265 aa11.7□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 APLP1P51693 650 aa11.69□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 IL21Q9HBE4 155 aa11.69□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 FCHSD2O94868 740 aa11.68□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 ADGRG1Q9Y653 693 aa11.68□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 DNAJB2P25686 324 aa11.67□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 RBM46Q8TBY0 533 aaKnown RBP11.67□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 IRX2Q9BZI1 471 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC13P1-201ENST00000435991 TMEM134Q9H6X4 195 aa11.64□□□□□ -0.55
TRAPPC13P1-201ENST00000435991 SMYD5Q6GMV2 418 aa11.63□□□□□ -0.55
TRAPPC13P1-201ENST00000435991 PRR14Q9BWN1 585 aa11.62□□□□□ -0.55
TRAPPC13P1-201ENST00000435991 HAP1P54257 671 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC13P1-201ENST00000435991 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
TRAPPC13P1-201ENST00000435991 RCCD1A6NED2 376 aa11.6□□□□□ -0.55
TRAPPC13P1-201ENST00000435991 HIC1Q14526 733 aa11.6□□□□□ -0.55
TRAPPC13P1-201ENST00000435991 FAM161AQ3B820 660 aa11.59□□□□□ -0.55
TRAPPC13P1-201ENST00000435991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms