RNA–Protein interactions for RNA: ENST00000435954.2

CLNS1AP1-201, Transcript of chloride nucleotide-sensitive channel 1A pseudogene 1, humanhuman

BASIC

Gene CLNS1AP1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP1-201ENST00000435954 MICALL2Q8IY33 904 aa12.17□□□□□ -0.46
CLNS1AP1-201ENST00000435954 DISP3Q9P2K9 1392 aa12.17□□□□□ -0.46
CLNS1AP1-201ENST00000435954 COL17A1Q9UMD9 1497 aaPredicted RBP12.15□□□□□ -0.46
CLNS1AP1-201ENST00000435954 PTPRGP23470 1445 aa12.15□□□□□ -0.46
CLNS1AP1-201ENST00000435954 BOLA1Q9Y3E2 137 aa12.15□□□□□ -0.46
CLNS1AP1-201ENST00000435954 KIAA0586Q9BVV6 1533 aa12.15□□□□□ -0.46
CLNS1AP1-201ENST00000435954 NCKAP5LQ9HCH0 1330 aa12.14□□□□□ -0.47
CLNS1AP1-201ENST00000435954 MAP3K4Q9Y6R4 1608 aa12.14□□□□□ -0.47
CLNS1AP1-201ENST00000435954 L3MBTL3Q96JM7 780 aaPredicted RBP12.13□□□□□ -0.47
CLNS1AP1-201ENST00000435954 TMEM121BQ9BXQ6 578 aaPredicted RBP12.13□□□□□ -0.47
CLNS1AP1-201ENST00000435954 WDR70Q9NW82 654 aa12.13□□□□□ -0.47
CLNS1AP1-201ENST00000435954 PDE4AP27815 886 aa12.12□□□□□ -0.47
CLNS1AP1-201ENST00000435954 CRISPLD2Q9H0B8 497 aa12.12□□□□□ -0.47
CLNS1AP1-201ENST00000435954 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
CLNS1AP1-201ENST00000435954 G3V3G9 751 aa12.11□□□□□ -0.47
CLNS1AP1-201ENST00000435954 EPRSP07814 1512 aaKnown RBP12.11□□□□□ -0.47
CLNS1AP1-201ENST00000435954 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
CLNS1AP1-201ENST00000435954 UHRF1BP1LA0JNW5 1464 aa12.1□□□□□ -0.47
CLNS1AP1-201ENST00000435954 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
CLNS1AP1-201ENST00000435954 ILDR2Q71H61 639 aa12.09□□□□□ -0.47
CLNS1AP1-201ENST00000435954 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
CLNS1AP1-201ENST00000435954 CUL7Q14999 1698 aa12.09□□□□□ -0.47
CLNS1AP1-201ENST00000435954 PCF11O94913 1555 aaKnown RBP12.08□□□□□ -0.48
CLNS1AP1-201ENST00000435954 MFSD10Q14728 455 aa12.06□□□□□ -0.48
CLNS1AP1-201ENST00000435954 PTPRMP28827 1452 aa12.06□□□□□ -0.48
CLNS1AP1-201ENST00000435954 KIF21BO75037 1637 aa12.04□□□□□ -0.48
CLNS1AP1-201ENST00000435954 UACAQ9BZF9 1416 aa12.04□□□□□ -0.48
CLNS1AP1-201ENST00000435954 BCANQ96GW7 911 aa12.04□□□□□ -0.48
CLNS1AP1-201ENST00000435954 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
CLNS1AP1-201ENST00000435954 SPATA31D1Q6ZQQ2 1576 aa12.04□□□□□ -0.48
CLNS1AP1-201ENST00000435954 KDM5BQ9UGL1 1544 aa12.03□□□□□ -0.48
CLNS1AP1-201ENST00000435954 CERKQ8TCT0 537 aa12.03□□□□□ -0.48
CLNS1AP1-201ENST00000435954 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
CLNS1AP1-201ENST00000435954 TTBK1Q5TCY1 1321 aaPredicted RBP12.03□□□□□ -0.48
CLNS1AP1-201ENST00000435954 MAGI3Q5TCQ9 1506 aa12.01□□□□□ -0.49
CLNS1AP1-201ENST00000435954 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
CLNS1AP1-201ENST00000435954 KCNV2Q8TDN2 545 aa12.01□□□□□ -0.49
CLNS1AP1-201ENST00000435954 E2F4Q16254 413 aa12□□□□□ -0.49
CLNS1AP1-201ENST00000435954 TMEM92Q6UXU6 159 aa12□□□□□ -0.49
CLNS1AP1-201ENST00000435954 P3H3Q8IVL6 736 aa12□□□□□ -0.49
CLNS1AP1-201ENST00000435954 WDR7Q9Y4E6 1490 aa12□□□□□ -0.49
CLNS1AP1-201ENST00000435954 ADAMTSL3P82987 1691 aa12□□□□□ -0.49
CLNS1AP1-201ENST00000435954 C2orf72A6NCS6 295 aa11.99□□□□□ -0.49
CLNS1AP1-201ENST00000435954 CFAP43Q8NDM7 1665 aa11.99□□□□□ -0.49
CLNS1AP1-201ENST00000435954 CD109Q6YHK3 1445 aa11.98□□□□□ -0.49
CLNS1AP1-201ENST00000435954 KIF3CO14782 793 aa11.98□□□□□ -0.49
CLNS1AP1-201ENST00000435954 PPP1R15BQ5SWA1 713 aa11.98□□□□□ -0.49
CLNS1AP1-201ENST00000435954 ZCCHC11Q5TAX3 1644 aaKnown RBP11.97□□□□□ -0.49
CLNS1AP1-201ENST00000435954 DSG2Q14126 1118 aa11.97□□□□□ -0.49
CLNS1AP1-201ENST00000435954 FOXK1P85037 733 aa11.96□□□□□ -0.49
CLNS1AP1-201ENST00000435954 C3orf67Q6ZVT6 689 aa11.96□□□□□ -0.49
CLNS1AP1-201ENST00000435954 IQGAP2Q13576 1575 aa11.95□□□□□ -0.5
CLNS1AP1-201ENST00000435954 POTEB2H3BUK9 544 aa11.94□□□□□ -0.5
CLNS1AP1-201ENST00000435954 CAMK2BQ13554 666 aa11.94□□□□□ -0.5
CLNS1AP1-201ENST00000435954 ARAP3Q8WWN8 1544 aa11.93□□□□□ -0.5
CLNS1AP1-201ENST00000435954 POTEJP0CG39 1038 aa11.93□□□□□ -0.5
CLNS1AP1-201ENST00000435954 NBR1Q14596 966 aa11.93□□□□□ -0.5
CLNS1AP1-201ENST00000435954 PHLDB1Q86UU1 1377 aa11.92□□□□□ -0.5
CLNS1AP1-201ENST00000435954 BCORL1Q5H9F3 1711 aa11.91□□□□□ -0.5
CLNS1AP1-201ENST00000435954 PLPP6Q8IY26 295 aa11.91□□□□□ -0.5
CLNS1AP1-201ENST00000435954 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
CLNS1AP1-201ENST00000435954 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.91□□□□□ -0.5
CLNS1AP1-201ENST00000435954 KIF27Q86VH2 1401 aa11.91□□□□□ -0.5
CLNS1AP1-201ENST00000435954 MADDQ8WXG6 1647 aa11.9□□□□□ -0.5
CLNS1AP1-201ENST00000435954 IGF1RP08069 1367 aa11.9□□□□□ -0.5
CLNS1AP1-201ENST00000435954 ARID4BQ4LE39 1312 aaPredicted RBP11.89□□□□□ -0.51
CLNS1AP1-201ENST00000435954 DISP1Q96F81 1524 aa11.87□□□□□ -0.51
CLNS1AP1-201ENST00000435954 HSPA2P54652 639 aa11.86□□□□□ -0.51
CLNS1AP1-201ENST00000435954 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
CLNS1AP1-201ENST00000435954 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
CLNS1AP1-201ENST00000435954 RIMS1Q86UR5 1692 aaKnown RBP11.85□□□□□ -0.51
CLNS1AP1-201ENST00000435954 CARMIL1Q5VZK9 1371 aa11.85□□□□□ -0.51
CLNS1AP1-201ENST00000435954 POGZQ7Z3K3 1410 aa11.85□□□□□ -0.51
CLNS1AP1-201ENST00000435954 KIAA0556O60303 1618 aa11.83□□□□□ -0.52
CLNS1AP1-201ENST00000435954 UGGT2Q9NYU1 1516 aa11.83□□□□□ -0.52
CLNS1AP1-201ENST00000435954 KCNH8Q96L42 1107 aa11.83□□□□□ -0.52
CLNS1AP1-201ENST00000435954 NEO1Q92859 1461 aa11.8□□□□□ -0.52
CLNS1AP1-201ENST00000435954 YEATS2Q9ULM3 1422 aa11.79□□□□□ -0.52
CLNS1AP1-201ENST00000435954 FANCAO15360 1455 aa11.79□□□□□ -0.52
CLNS1AP1-201ENST00000435954 IQSEC2Q5JU85 1478 aa11.79□□□□□ -0.52
CLNS1AP1-201ENST00000435954 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
CLNS1AP1-201ENST00000435954 ARHGEF40Q8TER5 1519 aa11.79□□□□□ -0.52
CLNS1AP1-201ENST00000435954 DPYSL4O14531 572 aa11.78□□□□□ -0.52
CLNS1AP1-201ENST00000435954 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
CLNS1AP1-201ENST00000435954 FAM9AQ8IZU1 332 aaPredicted RBP11.77□□□□□ -0.53
CLNS1AP1-201ENST00000435954 SEMA3EO15041 775 aa11.76□□□□□ -0.53
CLNS1AP1-201ENST00000435954 RAPGEF3O95398 923 aa11.76□□□□□ -0.53
CLNS1AP1-201ENST00000435954 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
CLNS1AP1-201ENST00000435954 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
CLNS1AP1-201ENST00000435954 PREX1Q8TCU6 1659 aa11.75□□□□□ -0.53
CLNS1AP1-201ENST00000435954 OXER1Q8TDS5 423 aa11.75□□□□□ -0.53
CLNS1AP1-201ENST00000435954 GOLGA3Q08378 1498 aa11.75□□□□□ -0.53
CLNS1AP1-201ENST00000435954 ABCA9Q8IUA7 1624 aa11.75□□□□□ -0.53
CLNS1AP1-201ENST00000435954 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
CLNS1AP1-201ENST00000435954 AKNAQ7Z591 1439 aa11.74□□□□□ -0.53
CLNS1AP1-201ENST00000435954 ABCA8O94911 1581 aa11.74□□□□□ -0.53
CLNS1AP1-201ENST00000435954 TTC37Q6PGP7 1564 aa11.73□□□□□ -0.53
CLNS1AP1-201ENST00000435954 FRMPD1Q5SYB0 1578 aa11.72□□□□□ -0.53
CLNS1AP1-201ENST00000435954 TESPA1A2RU30 521 aaPredicted RBP11.72□□□□□ -0.53
CLNS1AP1-201ENST00000435954 SLC34A2O95436 690 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms