RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 CCDC144AA2RUR9 1427 aa21.43■■□□□ 1.02
SF1-209ENST00000433274 KIF3BO15066 747 aa21.43■■□□□ 1.02
SF1-209ENST00000433274 ZNF326Q5BKZ1 582 aaKnown RBP21.43■■□□□ 1.02
SF1-209ENST00000433274 PLA2R1Q13018 1463 aa21.42■■□□□ 1.02
SF1-209ENST00000433274 NEO1Q92859 1461 aa21.42■■□□□ 1.02
SF1-209ENST00000433274 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.021e-7■■□□□ 12.5
SF1-209ENST00000433274 KDM5CP41229 1560 aa21.4■■□□□ 1.02
SF1-209ENST00000433274 MAP3K4Q9Y6R4 1608 aa21.4■■□□□ 1.02
SF1-209ENST00000433274 DEPDC5O75140 1603 aa21.39■■□□□ 1.01
SF1-209ENST00000433274 RAPGEF3O95398 923 aa21.38■■□□□ 1.01
SF1-209ENST00000433274 FAM69CQ0P6D2 419 aa21.38■■□□□ 1.01
SF1-209ENST00000433274 GLI2P10070 1586 aa21.37■■□□□ 1.01
SF1-209ENST00000433274 KANK1Q14678 1352 aa21.37■■□□□ 1.01
SF1-209ENST00000433274 DCAF11Q8TEB1 546 aa21.37■■□□□ 1.01
SF1-209ENST00000433274 KDM2AQ9Y2K7 1162 aa21.37■■□□□ 1.01
SF1-209ENST00000433274 MLH3Q9UHC1 1453 aa21.36■■□□□ 1.01
SF1-209ENST00000433274 EIF2AK4Q9P2K8 1649 aaKnown RBP21.36■■□□□ 1.01
SF1-209ENST00000433274 HECW2Q9P2P5 1572 aa21.35■■□□□ 1.01
SF1-209ENST00000433274 A2MP01023 1474 aa21.35■■□□□ 1.01
SF1-209ENST00000433274 ATP10AO60312 1499 aa21.34■■□□□ 1.01
SF1-209ENST00000433274 RGL3Q3MIN7 710 aa21.33■■□□□ 1.01
SF1-209ENST00000433274 DIP2BQ9P265 1576 aa21.33■■□□□ 1.01
SF1-209ENST00000433274 E9PCH4 1651 aa21.33■■□□□ 1.01
SF1-209ENST00000433274 UHRF1BP1Q6BDS2 1440 aa21.33■■□□□ 1
SF1-209ENST00000433274 YTHDC1Q96MU7 727 aaKnown RBP21.32■■□□□ 1
SF1-209ENST00000433274 PRDM15P57071 1507 aaPredicted RBP21.32■■□□□ 1
SF1-209ENST00000433274 VWDEQ8N2E2 1590 aa21.31■■□□□ 1
SF1-209ENST00000433274 MROH1Q8NDA8 1641 aa21.31■■□□□ 1
SF1-209ENST00000433274 TET3O43151 1660 aa21.3■■□□□ 1
SF1-209ENST00000433274 ABCA6Q8N139 1617 aa21.29■■□□□ 1
SF1-209ENST00000433274 FRMPD1Q5SYB0 1578 aa21.28■■□□□ 1
SF1-209ENST00000433274 WASHC2AQ641Q2 1341 aa21.28■■□□□ 1
SF1-209ENST00000433274 SPATA31E1Q6ZUB1 1445 aa21.28■■□□□ 1
SF1-209ENST00000433274 RALGAPBQ86X10 1494 aa21.27■□□□□ 0.99
SF1-209ENST00000433274 RICTORQ6R327 1708 aa21.26■□□□□ 0.99
SF1-209ENST00000433274 PTPRTO14522 1441 aa21.25■□□□□ 0.99
SF1-209ENST00000433274 GGT6Q6P531 493 aa21.24■□□□□ 0.99
SF1-209ENST00000433274 TRPM2O94759 1503 aa21.24■□□□□ 0.99
SF1-209ENST00000433274 USP47Q96K76 1375 aa21.24■□□□□ 0.99
SF1-209ENST00000433274 RNF17Q9BXT8 1623 aaKnown RBP21.23■□□□□ 0.99
SF1-209ENST00000433274 C11orf95C9JLR9 678 aaPredicted RBP21.23■□□□□ 0.99
SF1-209ENST00000433274 TSPOAP1O95153 1857 aa21.23■□□□□ 0.99
SF1-209ENST00000433274 SPHKAPQ2M3C7 1700 aa21.23■□□□□ 0.99
SF1-209ENST00000433274 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
SF1-209ENST00000433274 CENPBP07199 599 aaPredicted RBP21.22■□□□□ 0.99
SF1-209ENST00000433274 PRAG1Q86YV5 1406 aa21.22■□□□□ 0.99
SF1-209ENST00000433274 DIP2CQ9Y2E4 1556 aa21.22■□□□□ 0.99
SF1-209ENST00000433274 YEATS2Q9ULM3 1422 aa21.2■□□□□ 0.98
SF1-209ENST00000433274 EFCAB6Q5THR3 1501 aa21.2■□□□□ 0.98
SF1-209ENST00000433274 CCDC7Q96M83 1385 aa21.19■□□□□ 0.98
SF1-209ENST00000433274 PPRC1Q5VV67 1664 aaKnown RBP21.19■□□□□ 0.98
SF1-209ENST00000433274 CLTCL1P53675 1640 aa21.19■□□□□ 0.98
SF1-209ENST00000433274 ROCK2O75116 1388 aaKnown RBP21.18■□□□□ 0.98
SF1-209ENST00000433274 CEP152O94986 1710 aa21.18■□□□□ 0.98
SF1-209ENST00000433274 LMTK2Q8IWU2 1503 aa21.18■□□□□ 0.98
SF1-209ENST00000433274 ANP32CO43423 234 aa21.18■□□□□ 0.98
SF1-209ENST00000433274 BCORL1Q5H9F3 1711 aa21.17■□□□□ 0.98
SF1-209ENST00000433274 KIF7Q2M1P5 1343 aa21.16■□□□□ 0.98
SF1-209ENST00000433274 WASHC2CQ9Y4E1 1318 aa21.15■□□□□ 0.98
SF1-209ENST00000433274 TRPM1Q7Z4N2 1603 aa21.14■□□□□ 0.98
SF1-209ENST00000433274 NBPF1Q3BBV0 1214 aa21.13■□□□□ 0.97
SF1-209ENST00000433274 UGGT1Q9NYU2 1555 aa21.13■□□□□ 0.97
SF1-209ENST00000433274 ZMYM4Q5VZL5 1548 aa21.12■□□□□ 0.97
SF1-209ENST00000433274 ABCC3O15438 1527 aa21.11■□□□□ 0.97
SF1-209ENST00000433274 NPATQ14207 1427 aa21.11■□□□□ 0.97
SF1-209ENST00000433274 KIF13AQ9H1H9 1805 aa21.11■□□□□ 0.97
SF1-209ENST00000433274 CNTLNQ9NXG0 1405 aa21.1■□□□□ 0.97
SF1-209ENST00000433274 ST20-MTHFSA0A0A6YYL1 179 aa21.1■□□□□ 0.97
SF1-209ENST00000433274 POLR1AO95602 1720 aaPredicted RBP21.09■□□□□ 0.97
SF1-209ENST00000433274 POLR3GLQ9BT43 218 aa21.07■□□□□ 0.96
SF1-209ENST00000433274 GPRASP1Q5JY77 1395 aa21.07■□□□□ 0.96
SF1-209ENST00000433274 CAMSAP1Q5T5Y3 1602 aa21.04■□□□□ 0.96
SF1-209ENST00000433274 CCER2I3L3R5 266 aa21.04■□□□□ 0.96
SF1-209ENST00000433274 CFAP65Q6ZU64 1925 aaKnown RBP21.04■□□□□ 0.96
SF1-209ENST00000433274 STAC3Q96MF2 364 aa21.04■□□□□ 0.96
SF1-209ENST00000433274 MADDQ8WXG6 1647 aa21.04■□□□□ 0.96
SF1-209ENST00000433274 NEURL4Q96JN8 1562 aa21.03■□□□□ 0.96
SF1-209ENST00000433274 KIF1BO60333 1816 aa21.02■□□□□ 0.96
SF1-209ENST00000433274 CHGAP10645 457 aaKnown RBP21.02■□□□□ 0.96
SF1-209ENST00000433274 COL17A1Q9UMD9 1497 aaPredicted RBP21.02■□□□□ 0.96
SF1-209ENST00000433274 ARID4BQ4LE39 1312 aaPredicted RBP21.02■□□□□ 0.96
SF1-209ENST00000433274 LAMC1P11047 1609 aa21.01■□□□□ 0.95
SF1-209ENST00000433274 MROH2AA6NES4 1674 aa20.99■□□□□ 0.95
SF1-209ENST00000433274 ZC3H13Q5T200 1668 aaKnown RBP20.98■□□□□ 0.95
SF1-209ENST00000433274 SIGLEC1Q9BZZ2 1709 aa20.97■□□□□ 0.95
SF1-209ENST00000433274 NOS1P29475 1434 aa20.97■□□□□ 0.95
SF1-209ENST00000433274 ADGRB3O60242 1522 aa20.97■□□□□ 0.95
SF1-209ENST00000433274 ARHGAP31Q2M1Z3 1444 aa20.97■□□□□ 0.95
SF1-209ENST00000433274 ADGRF5Q8IZF2 1346 aa20.95■□□□□ 0.94
SF1-209ENST00000433274 REREQ9P2R6 1566 aa20.95■□□□□ 0.94
SF1-209ENST00000433274 MYOM2P54296 1465 aa20.95■□□□□ 0.94
SF1-209ENST00000433274 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
SF1-209ENST00000433274 SYNMO15061 1565 aa20.93■□□□□ 0.94
SF1-209ENST00000433274 AGLP35573 1532 aa20.93■□□□□ 0.94
SF1-209ENST00000433274 PRKRIP1Q9H875 184 aaPredicted RBP20.92■□□□□ 0.94
SF1-209ENST00000433274 TESK2Q96S53 571 aa20.92■□□□□ 0.94
SF1-209ENST00000433274 IFT172Q9UG01 1749 aa20.92■□□□□ 0.94
SF1-209ENST00000433274 ARHGEF40Q8TER5 1519 aa20.91■□□□□ 0.94
SF1-209ENST00000433274 CFAP70Q5T0N1 1121 aa20.9■□□□□ 0.94
SF1-209ENST00000433274 MLECQ14165 292 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms