RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
LRRTM1-206ENST00000433224 CCDC184Q52MB2 194 aa16.28■□□□□ 0.2
LRRTM1-206ENST00000433224 DAPK1P53355 1430 aa16.27■□□□□ 0.2
LRRTM1-206ENST00000433224 NLRP13Q86W25 1043 aa16.27■□□□□ 0.2
LRRTM1-206ENST00000433224 EHBP1L1Q8N3D4 1523 aa16.27■□□□□ 0.19
LRRTM1-206ENST00000433224 HAP1P54257 671 aaPredicted RBP16.27■□□□□ 0.19
LRRTM1-206ENST00000433224 RALBP1Q15311 655 aa16.26■□□□□ 0.19
LRRTM1-206ENST00000433224 PTPRKQ15262 1439 aa16.25■□□□□ 0.19
LRRTM1-206ENST00000433224 CCDC7Q96M83 1385 aa16.25■□□□□ 0.19
LRRTM1-206ENST00000433224 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
LRRTM1-206ENST00000433224 C11orf95C9JLR9 678 aaPredicted RBP16.24■□□□□ 0.19
LRRTM1-206ENST00000433224 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
LRRTM1-206ENST00000433224 MIA2Q96PC5 1412 aa16.24■□□□□ 0.19
LRRTM1-206ENST00000433224 HDGFL2Q7Z4V5 671 aaPredicted RBP16.23■□□□□ 0.19
LRRTM1-206ENST00000433224 HDGFP51858 240 aaKnown RBP16.23■□□□□ 0.19
LRRTM1-206ENST00000433224 PLIN1O60240 522 aa16.22■□□□□ 0.19
LRRTM1-206ENST00000433224 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
LRRTM1-206ENST00000433224 ABCC5O15440 1437 aa16.21■□□□□ 0.19
LRRTM1-206ENST00000433224 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.19
LRRTM1-206ENST00000433224 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.18
LRRTM1-206ENST00000433224 CUL7Q14999 1698 aa16.2■□□□□ 0.18
LRRTM1-206ENST00000433224 CLUAP1Q96AJ1 413 aa16.2■□□□□ 0.18
LRRTM1-206ENST00000433224 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
LRRTM1-206ENST00000433224 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
LRRTM1-206ENST00000433224 BCL2L13Q9BXK5 485 aa16.18■□□□□ 0.18
LRRTM1-206ENST00000433224 LTV1Q96GA3 475 aaPredicted RBP16.18■□□□□ 0.18
LRRTM1-206ENST00000433224 CABP2Q9NPB3 220 aa16.18■□□□□ 0.18
LRRTM1-206ENST00000433224 SUPT6HQ7KZ85 1726 aaKnown RBP16.17■□□□□ 0.18
LRRTM1-206ENST00000433224 MYBBP1AQ9BQG0 1328 aaKnown RBP16.16■□□□□ 0.18
LRRTM1-206ENST00000433224 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
LRRTM1-206ENST00000433224 KIAA1107Q9UPP5 1409 aa16.16■□□□□ 0.18
LRRTM1-206ENST00000433224 APAF1O14727 1248 aa16.16■□□□□ 0.18
LRRTM1-206ENST00000433224 EIF3AQ14152 1382 aaKnown RBP16.16■□□□□ 0.18
LRRTM1-206ENST00000433224 NGDNQ8NEJ9 315 aaKnown RBP16.15■□□□□ 0.18
LRRTM1-206ENST00000433224 UPF2Q9HAU5 1272 aaKnown RBP16.15■□□□□ 0.18
LRRTM1-206ENST00000433224 ELL2O00472 640 aaPredicted RBP16.15■□□□□ 0.18
LRRTM1-206ENST00000433224 ERICH6BQ5W0A0 696 aa16.15■□□□□ 0.18
LRRTM1-206ENST00000433224 EID1Q9Y6B2 187 aa16.14■□□□□ 0.17
LRRTM1-206ENST00000433224 TERF2IPQ9NYB0 399 aa16.14■□□□□ 0.17
LRRTM1-206ENST00000433224 GGNBP2Q9H3C7 697 aa16.13■□□□□ 0.17
LRRTM1-206ENST00000433224 CAMSAP2Q08AD1 1489 aa16.13■□□□□ 0.17
LRRTM1-206ENST00000433224 SLC12A5Q9H2X9 1139 aa16.12■□□□□ 0.17
LRRTM1-206ENST00000433224 KIF21AQ7Z4S6 1674 aa16.12■□□□□ 0.17
LRRTM1-206ENST00000433224 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
LRRTM1-206ENST00000433224 NCOA1Q15788 1441 aa16.12■□□□□ 0.17
LRRTM1-206ENST00000433224 PTPN23Q9H3S7 1636 aa16.11■□□□□ 0.17
LRRTM1-206ENST00000433224 APBB1O00213 710 aa16.1■□□□□ 0.17
LRRTM1-206ENST00000433224 MYH16Q9H6N6 1097 aa16.1■□□□□ 0.17
LRRTM1-206ENST00000433224 FANCIQ9NVI1 1328 aa16.1■□□□□ 0.17
LRRTM1-206ENST00000433224 GOLGA2Q08379 1002 aa16.1■□□□□ 0.17
LRRTM1-206ENST00000433224 DDRGK1Q96HY6 314 aa16.1■□□□□ 0.17
LRRTM1-206ENST00000433224 ANKRD30BQ9BXX2 1392 aa16.1■□□□□ 0.17
LRRTM1-206ENST00000433224 NUP153P49790 1475 aaKnown RBP16.09■□□□□ 0.17
LRRTM1-206ENST00000433224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.17
LRRTM1-206ENST00000433224 ATP10BO94823 1461 aa16.09■□□□□ 0.17
LRRTM1-206ENST00000433224 TCERG1O14776 1098 aaKnown RBP16.09■□□□□ 0.17
LRRTM1-206ENST00000433224 CDCA7LQ96GN5 454 aa16.08■□□□□ 0.16
LRRTM1-206ENST00000433224 IPO9Q96P70 1041 aaKnown RBP16.08■□□□□ 0.16
LRRTM1-206ENST00000433224 EVC2Q86UK5 1308 aa16.08■□□□□ 0.16
LRRTM1-206ENST00000433224 NUTM2GQ5VZR2 741 aa16.07■□□□□ 0.16
LRRTM1-206ENST00000433224 GPATCH8Q9UKJ3 1502 aaKnown RBP16.06■□□□□ 0.16
LRRTM1-206ENST00000433224 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
LRRTM1-206ENST00000433224 FBXO31Q5XUX0 539 aaPredicted RBP16.06■□□□□ 0.16
LRRTM1-206ENST00000433224 ADAMTS8Q9UP79 889 aa16.06■□□□□ 0.16
LRRTM1-206ENST00000433224 PLEKHH2Q8IVE3 1493 aa16.05■□□□□ 0.16
LRRTM1-206ENST00000433224 EXOC6Q8TAG9 804 aa16.05■□□□□ 0.16
LRRTM1-206ENST00000433224 TXNDC2Q86VQ3 553 aa16.04■□□□□ 0.16
LRRTM1-206ENST00000433224 SLC26A8Q96RN1 970 aa16.04■□□□□ 0.16
LRRTM1-206ENST00000433224 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
LRRTM1-206ENST00000433224 PRAM1Q96QH2 718 aa16.04■□□□□ 0.16
LRRTM1-206ENST00000433224 ZBED9Q6R2W3 1325 aa16.03■□□□□ 0.16
LRRTM1-206ENST00000433224 ROCK1Q13464 1354 aa16.03■□□□□ 0.16
LRRTM1-206ENST00000433224 MSH5O43196 834 aa16.03■□□□□ 0.16
LRRTM1-206ENST00000433224 CGNL1Q0VF96 1302 aa16.02■□□□□ 0.16
LRRTM1-206ENST00000433224 CD109Q6YHK3 1445 aa16.02■□□□□ 0.16
LRRTM1-206ENST00000433224 AKNAQ7Z591 1439 aa16.02■□□□□ 0.16
LRRTM1-206ENST00000433224 AMPHP49418 695 aa16.02■□□□□ 0.15
LRRTM1-206ENST00000433224 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.02■□□□□ 0.15
LRRTM1-206ENST00000433224 CCDC141Q6ZP82 1450 aa16.02■□□□□ 0.15
LRRTM1-206ENST00000433224 HMOX1P09601 288 aa16.01■□□□□ 0.15
LRRTM1-206ENST00000433224 RTF1Q92541 710 aaKnown RBP16.01■□□□□ 0.15
LRRTM1-206ENST00000433224 SMC4Q9NTJ3 1288 aa16.01■□□□□ 0.15
LRRTM1-206ENST00000433224 MTHFSP49914 203 aa16■□□□□ 0.15
LRRTM1-206ENST00000433224 ITPRIPQ8IWB1 547 aa16■□□□□ 0.15
LRRTM1-206ENST00000433224 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
LRRTM1-206ENST00000433224 ADGRF5Q8IZF2 1346 aa15.99■□□□□ 0.15
LRRTM1-206ENST00000433224 CSB-PGBD3P0DP91 1061 aa15.99■□□□□ 0.15
LRRTM1-206ENST00000433224 PMFBP1Q8TBY8 1022 aa15.98■□□□□ 0.15
LRRTM1-206ENST00000433224 RBM33Q96EV2 1170 aaKnown RBP15.98■□□□□ 0.15
LRRTM1-206ENST00000433224 PNNQ9H307 717 aaKnown RBP15.97■□□□□ 0.15
LRRTM1-206ENST00000433224 SLC4A3P48751 1232 aa15.97■□□□□ 0.15
LRRTM1-206ENST00000433224 COG3Q96JB2 828 aa15.97■□□□□ 0.15
LRRTM1-206ENST00000433224 MAPKBP1O60336 1514 aa15.96■□□□□ 0.15
LRRTM1-206ENST00000433224 IDI1Q13907 227 aa15.96■□□□□ 0.15
LRRTM1-206ENST00000433224 CRBNQ96SW2 442 aa15.96■□□□□ 0.15
LRRTM1-206ENST00000433224 COG6Q9Y2V7 657 aa15.96■□□□□ 0.14
LRRTM1-206ENST00000433224 ADGRL1O94910 1474 aa15.96■□□□□ 0.14
LRRTM1-206ENST00000433224 ERBINQ96RT1 1412 aa15.95■□□□□ 0.14
LRRTM1-206ENST00000433224 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
LRRTM1-206ENST00000433224 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms