RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 DNMT1P26358 1616 aaKnown RBP35.92■■■■□ 3.34
HOMER3-203ENST00000433218 PTPN23Q9H3S7 1636 aa35.92■■■■□ 3.34
HOMER3-203ENST00000433218 KIF3BO15066 747 aa35.91■■■■□ 3.34
HOMER3-203ENST00000433218 EIF2AK4Q9P2K8 1649 aaKnown RBP35.9■■■■□ 3.34
HOMER3-203ENST00000433218 FAM135AQ9P2D6 1515 aa35.89■■■■□ 3.34
HOMER3-203ENST00000433218 POLR1AO95602 1720 aaPredicted RBP35.88■■■■□ 3.33
HOMER3-203ENST00000433218 MIA2Q96PC5 1412 aa35.88■■■■□ 3.33
HOMER3-203ENST00000433218 PZPP20742 1482 aa35.87■■■■□ 3.33
HOMER3-203ENST00000433218 ZC3H13Q5T200 1668 aaKnown RBP35.86■■■■□ 3.33
HOMER3-203ENST00000433218 TCOF1Q13428 1488 aaKnown RBP35.84■■■■□ 3.33
HOMER3-203ENST00000433218 DMRT2Q9Y5R5 561 aa35.83■■■■□ 3.33
HOMER3-203ENST00000433218 PLA2R1Q13018 1463 aa35.83■■■■□ 3.33
HOMER3-203ENST00000433218 CFAP65Q6ZU64 1925 aaKnown RBP35.83■■■■□ 3.33
HOMER3-203ENST00000433218 RSPH4AQ5TD94 716 aa35.83■■■■□ 3.33
HOMER3-203ENST00000433218 A2ML1A8K2U0 1454 aa35.82■■■■□ 3.33
HOMER3-203ENST00000433218 ABCC3O15438 1527 aa35.82■■■■□ 3.33
HOMER3-203ENST00000433218 NCKAP5LQ9HCH0 1330 aa35.82■■■■□ 3.32
HOMER3-203ENST00000433218 FBXO31Q5XUX0 539 aaPredicted RBP35.81■■■■□ 3.32
HOMER3-203ENST00000433218 PPP6R1Q9UPN7 881 aa35.81■■■■□ 3.32
HOMER3-203ENST00000433218 NEURL4Q96JN8 1562 aa35.79■■■■□ 3.32
HOMER3-203ENST00000433218 TSPY4P0CV99 314 aa35.78■■■■□ 3.32
HOMER3-203ENST00000433218 TSPY10P0CW01 314 aa35.78■■■■□ 3.32
HOMER3-203ENST00000433218 TNRQ92752 1358 aa35.75■■■■□ 3.31
HOMER3-203ENST00000433218 SHANK2Q9UPX8 1470 aa35.74■■■■□ 3.31
HOMER3-203ENST00000433218 ABCC5O15440 1437 aa35.74■■■■□ 3.31
HOMER3-203ENST00000433218 DUOX2Q9NRD8 1548 aa35.73■■■■□ 3.31
HOMER3-203ENST00000433218 FGD6Q6ZV73 1430 aa35.72■■■■□ 3.31
HOMER3-203ENST00000433218 WASHC2CQ9Y4E1 1318 aa35.71■■■■□ 3.31
HOMER3-203ENST00000433218 SPATA31D1Q6ZQQ2 1576 aa35.69■■■■□ 3.3
HOMER3-203ENST00000433218 PRDM15P57071 1507 aaPredicted RBP35.68■■■■□ 3.3
HOMER3-203ENST00000433218 DAPK1P53355 1430 aa35.68■■■■□ 3.3
HOMER3-203ENST00000433218 DEPDC5O75140 1603 aa35.68■■■■□ 3.3
HOMER3-203ENST00000433218 ZNF335Q9H4Z2 1342 aaPredicted RBP35.66■■■■□ 3.3
HOMER3-203ENST00000433218 KIF15Q9NS87 1388 aa35.63■■■■□ 3.29
HOMER3-203ENST00000433218 ERVK-7P63135 1459 aa35.62■■■■□ 3.29
HOMER3-203ENST00000433218 UGGT1Q9NYU2 1555 aa35.61■■■■□ 3.29
HOMER3-203ENST00000433218 NLRP1Q9C000 1473 aa35.59■■■■□ 3.29
HOMER3-203ENST00000433218 UBR1Q8IWV7 1749 aa35.59■■■■□ 3.29
HOMER3-203ENST00000433218 APLP2Q06481 763 aa35.58■■■■□ 3.29
HOMER3-203ENST00000433218 PKD2Q13563 968 aa35.58■■■■□ 3.29
HOMER3-203ENST00000433218 IQSEC2Q5JU85 1478 aa35.57■■■■□ 3.28
HOMER3-203ENST00000433218 ERBINQ96RT1 1412 aa35.57■■■■□ 3.28
HOMER3-203ENST00000433218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.55■■■■□ 3.28
HOMER3-203ENST00000433218 IQGAP1P46940 1657 aa35.52■■■■□ 3.28
HOMER3-203ENST00000433218 RRP7BPQ9NSQ0 103 aa35.52■■■■□ 3.28
HOMER3-203ENST00000433218 STRCP1A6NGW2 1772 aa35.5■■■■□ 3.27
HOMER3-203ENST00000433218 VWDEQ8N2E2 1590 aa35.48■■■■□ 3.27
HOMER3-203ENST00000433218 CHIC2Q9UKJ5 165 aa35.46■■■■□ 3.27
HOMER3-203ENST00000433218 PIK3C2BO00750 1634 aa35.45■■■■□ 3.26
HOMER3-203ENST00000433218 ADGRL2O95490 1459 aa35.42■■■■□ 3.26
HOMER3-203ENST00000433218 MED14O60244 1454 aa35.41■■■■□ 3.26
HOMER3-203ENST00000433218 NPHP4O75161 1426 aaPredicted RBP35.38■■■■□ 3.26
HOMER3-203ENST00000433218 ARHGAP31Q2M1Z3 1444 aa35.38■■■■□ 3.25
HOMER3-203ENST00000433218 SYNMO15061 1565 aa35.38■■■■□ 3.25
HOMER3-203ENST00000433218 ANKRD30AQ9BXX3 1397 aa35.37■■■■□ 3.25
HOMER3-203ENST00000433218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.36■■■■□ 3.25
HOMER3-203ENST00000433218 EFCAB6Q5THR3 1501 aa35.35■■■■□ 3.25
HOMER3-203ENST00000433218 LMTK2Q8IWU2 1503 aa35.35■■■■□ 3.25
HOMER3-203ENST00000433218 THEMISQ8N1K5 641 aaPredicted RBP35.32■■■■□ 3.25
HOMER3-203ENST00000433218 CPS1P31327 1500 aa35.32■■■■□ 3.25
HOMER3-203ENST00000433218 ANKLE2Q86XL3 938 aa35.32■■■■□ 3.24
HOMER3-203ENST00000433218 FAM50AQ14320 339 aaKnown RBP35.31■■■■□ 3.24
HOMER3-203ENST00000433218 MYO5BQ9ULV0 1848 aa35.29■■■■□ 3.24
HOMER3-203ENST00000433218 ALKQ9UM73 1620 aa35.28■■■■□ 3.24
HOMER3-203ENST00000433218 ARHGAP23Q9P227 1491 aa35.28■■■■□ 3.24
HOMER3-203ENST00000433218 SLIT1O75093 1534 aa35.28■■■■□ 3.24
HOMER3-203ENST00000433218 SCAF11Q99590 1463 aaKnown RBP35.25■■■■□ 3.23
HOMER3-203ENST00000433218 KDM5AP29375 1690 aaKnown RBP35.25■■■■□ 3.23
HOMER3-203ENST00000433218 UBAP1LF5GYI3 381 aa35.24■■■■□ 3.23
HOMER3-203ENST00000433218 UNC13BO14795 1591 aa35.24■■■■□ 3.23
HOMER3-203ENST00000433218 XIRP1Q702N8 1843 aaKnown RBP35.23■■■■□ 3.23
HOMER3-203ENST00000433218 KANK1Q14678 1352 aa35.23■■■■□ 3.23
HOMER3-203ENST00000433218 TET3O43151 1660 aa35.22■■■■□ 3.23
HOMER3-203ENST00000433218 GCC2Q8IWJ2 1684 aa35.21■■■■□ 3.23
HOMER3-203ENST00000433218 ANKRD50Q9ULJ7 1429 aa35.19■■■■□ 3.22
HOMER3-203ENST00000433218 ADGRB3O60242 1522 aa35.17■■■■□ 3.22
HOMER3-203ENST00000433218 LTKP29376 864 aa35.16■■■■□ 3.22
HOMER3-203ENST00000433218 NOS1P29475 1434 aa35.16■■■■□ 3.22
HOMER3-203ENST00000433218 PPARGC1BQ86YN6 1023 aaKnown RBP35.15■■■■□ 3.22
HOMER3-203ENST00000433218 E9PCH4 1651 aa35.14■■■■□ 3.22
HOMER3-203ENST00000433218 LRRC7Q96NW7 1537 aa35.13■■■■□ 3.21
HOMER3-203ENST00000433218 DISP3Q9P2K9 1392 aa35.12■■■■□ 3.21
HOMER3-203ENST00000433218 IQGAP3Q86VI3 1631 aa35.08■■■■□ 3.21
HOMER3-203ENST00000433218 TMEM2Q9UHN6 1383 aa35.07■■■■□ 3.2
HOMER3-203ENST00000433218 IDI1Q13907 227 aa35.06■■■■□ 3.2
HOMER3-203ENST00000433218 TXNDC2Q86VQ3 553 aa35.03■■■■□ 3.2
HOMER3-203ENST00000433218 RPRD2Q5VT52 1461 aaKnown RBP35.03■■■■□ 3.2
HOMER3-203ENST00000433218 SCAF1Q9H7N4 1312 aaKnown RBP35.02■■■■□ 3.2
HOMER3-203ENST00000433218 PIP4K2BP78356 416 aa35.02■■■■□ 3.2
HOMER3-203ENST00000433218 ILDR2Q71H61 639 aa35.02■■■■□ 3.2
HOMER3-203ENST00000433218 TMEM131LA2VDJ0 1609 aa35.02■■■■□ 3.2
HOMER3-203ENST00000433218 ROCK1Q13464 1354 aa34.98■■■■□ 3.19
HOMER3-203ENST00000433218 HSPA1LP34931 641 aa34.95■■■■□ 3.19
HOMER3-203ENST00000433218 ITGAEP38570 1179 aa34.94■■■■□ 3.18
HOMER3-203ENST00000433218 STAG3Q9UJ98 1225 aa34.94■■■■□ 3.18
HOMER3-203ENST00000433218 NWD1Q149M9 1564 aa34.9■■■■□ 3.18
HOMER3-203ENST00000433218 MED1Q15648 1581 aaPredicted RBP34.9■■■■□ 3.18
HOMER3-203ENST00000433218 ZFYVE9O95405 1425 aa34.9■■■■□ 3.18
HOMER3-203ENST00000433218 TOM1O60784 492 aa34.89■■■■□ 3.18
HOMER3-203ENST00000433218 EID1Q9Y6B2 187 aa34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms