RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 PEG3Q9GZU2 1588 aa13.85□□□□□ -0.19
CCDC171-202ENST00000432954 ZNF526Q8TF50 670 aaPredicted RBP13.85□□□□□ -0.19
CCDC171-202ENST00000432954 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
CCDC171-202ENST00000432954 CWC22Q9HCG8 908 aaKnown RBP13.85□□□□□ -0.19
CCDC171-202ENST00000432954 POGKQ9P215 609 aa13.85□□□□□ -0.19
CCDC171-202ENST00000432954 PDE4AP27815 886 aa13.84□□□□□ -0.19
CCDC171-202ENST00000432954 MAP2K1Q02750 393 aaPredicted RBP13.83□□□□□ -0.2
CCDC171-202ENST00000432954 TULP2O00295 520 aa13.82□□□□□ -0.2
CCDC171-202ENST00000432954 ZNF500O60304 480 aaPredicted RBP13.81□□□□□ -0.2
CCDC171-202ENST00000432954 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC171-202ENST00000432954 KCNJ4P48050 445 aa13.8□□□□□ -0.2
CCDC171-202ENST00000432954 MRE11P49959 708 aa13.8□□□□□ -0.2
CCDC171-202ENST00000432954 ISY1Q9ULR0 285 aaKnown RBP13.8□□□□□ -0.2
CCDC171-202ENST00000432954 CEP83Q9Y592 693 aa13.8□□□□□ -0.2
CCDC171-202ENST00000432954 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
CCDC171-202ENST00000432954 NBPF10Q6P3W6 841 aaKnown RBP13.79□□□□□ -0.2
CCDC171-202ENST00000432954 OTUD6BQ8N6M0 293 aa13.79□□□□□ -0.2
CCDC171-202ENST00000432954 PHLDB1Q86UU1 1377 aa13.79□□□□□ -0.2
CCDC171-202ENST00000432954 LOC102724159A0A0B4J2E5 919 aa13.79□□□□□ -0.2
CCDC171-202ENST00000432954 PLEKHD1A6NEE1 506 aa13.79□□□□□ -0.2
CCDC171-202ENST00000432954 PWP2Q15269 919 aaKnown RBP13.79□□□□□ -0.2
CCDC171-202ENST00000432954 GOLIM4O00461 696 aa13.78□□□□□ -0.2
CCDC171-202ENST00000432954 MYH16Q9H6N6 1097 aa13.78□□□□□ -0.2
CCDC171-202ENST00000432954 MYCBPQ99417 103 aaPredicted RBP13.77□□□□□ -0.21
CCDC171-202ENST00000432954 BSDC1Q9NW68 430 aaPredicted RBP13.77□□□□□ -0.21
CCDC171-202ENST00000432954 PANK2Q9BZ23 570 aa13.76□□□□□ -0.21
CCDC171-202ENST00000432954 ANP32CO43423 234 aa13.76□□□□□ -0.21
CCDC171-202ENST00000432954 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
CCDC171-202ENST00000432954 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
CCDC171-202ENST00000432954 EP400NLQ6ZTU2 488 aa13.76□□□□□ -0.21
CCDC171-202ENST00000432954 UQCRHLA0A096LP55 91 aa13.75□□□□□ -0.21
CCDC171-202ENST00000432954 CCDC66A2RUB6 948 aa13.75□□□□□ -0.21
CCDC171-202ENST00000432954 UQCRHP07919 91 aa13.75□□□□□ -0.21
CCDC171-202ENST00000432954 MPNDQ8N594 471 aa13.75□□□□□ -0.21
CCDC171-202ENST00000432954 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
CCDC171-202ENST00000432954 CFAP65Q6ZU64 1925 aaKnown RBP13.75□□□□□ -0.21
CCDC171-202ENST00000432954 TRIM6-TRIM34B2RNG4 842 aa13.75□□□□□ -0.21
CCDC171-202ENST00000432954 CASC1Q6TDU7 716 aa13.75□□□□□ -0.21
CCDC171-202ENST00000432954 TRIM34Q9BYJ4 488 aa13.75□□□□□ -0.21
CCDC171-202ENST00000432954 SIRT1Q96EB6 747 aa13.74□□□□□ -0.21
CCDC171-202ENST00000432954 TIGD1Q96MW7 591 aa13.74□□□□□ -0.21
CCDC171-202ENST00000432954 CCDC172P0C7W6 258 aa13.73□□□□□ -0.21
CCDC171-202ENST00000432954 HNRNPUQ00839 825 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC171-202ENST00000432954 CT47A1Q5JQC4 288 aaPredicted RBP13.73□□□□□ -0.21
CCDC171-202ENST00000432954 RNF217Q8TC41 542 aa13.73□□□□□ -0.21
CCDC171-202ENST00000432954 NBPF6Q5VWK0 638 aa13.73□□□□□ -0.21
CCDC171-202ENST00000432954 NBPF5PQ86XG9 351 aaPredicted RBP13.73□□□□□ -0.21
CCDC171-202ENST00000432954 NBPF4Q96M43 638 aa13.73□□□□□ -0.21
CCDC171-202ENST00000432954 NCAPGQ9BPX3 1015 aa13.73□□□□□ -0.21
CCDC171-202ENST00000432954 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
CCDC171-202ENST00000432954 SSR1P43307 286 aaKnown RBP13.72□□□□□ -0.21
CCDC171-202ENST00000432954 ZKSCAN8Q15776 578 aaPredicted RBP13.72□□□□□ -0.21
CCDC171-202ENST00000432954 RNF123Q5XPI4 1314 aa13.71□□□□□ -0.21
CCDC171-202ENST00000432954 CAPN2P17655 700 aa13.71□□□□□ -0.21
CCDC171-202ENST00000432954 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.21
CCDC171-202ENST00000432954 ZBTB9Q96C00 473 aa13.71□□□□□ -0.22
CCDC171-202ENST00000432954 SMC4Q9NTJ3 1288 aa13.71□□□□□ -0.22
CCDC171-202ENST00000432954 ZSCAN30Q86W11 494 aa13.7□□□□□ -0.22
CCDC171-202ENST00000432954 CCDC27Q2M243 656 aa13.69□□□□□ -0.22
CCDC171-202ENST00000432954 KIF16BQ96L93 1317 aa13.68□□□□□ -0.22
CCDC171-202ENST00000432954 NINLQ9Y2I6 1382 aa13.68□□□□□ -0.22
CCDC171-202ENST00000432954 CBX1P83916 185 aa13.68□□□□□ -0.22
CCDC171-202ENST00000432954 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
CCDC171-202ENST00000432954 STK26Q9P289 416 aa13.68□□□□□ -0.22
CCDC171-202ENST00000432954 R3HCC1Q9Y3T6 440 aaKnown RBP13.68□□□□□ -0.22
CCDC171-202ENST00000432954 MFAP1P55081 439 aaKnown RBP13.67□□□□□ -0.22
CCDC171-202ENST00000432954 DHX57Q6P158 1386 aaKnown RBP13.67□□□□□ -0.22
CCDC171-202ENST00000432954 DDX10Q13206 875 aaKnown RBP13.66□□□□□ -0.22
CCDC171-202ENST00000432954 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
CCDC171-202ENST00000432954 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
CCDC171-202ENST00000432954 GABPB1Q06547 395 aaPredicted RBP13.65□□□□□ -0.22
CCDC171-202ENST00000432954 CCDC96Q2M329 555 aa13.65□□□□□ -0.22
CCDC171-202ENST00000432954 RGL3Q3MIN7 710 aa13.65□□□□□ -0.22
CCDC171-202ENST00000432954 ZNF771Q7L3S4 317 aaPredicted RBP13.65□□□□□ -0.22
CCDC171-202ENST00000432954 SGSM3Q96HU1 749 aa13.65□□□□□ -0.22
CCDC171-202ENST00000432954 MLECQ14165 292 aa13.65□□□□□ -0.22
CCDC171-202ENST00000432954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC171-202ENST00000432954 SASS6Q6UVJ0 657 aa13.64□□□□□ -0.23
CCDC171-202ENST00000432954 GRPEL1Q9HAV7 217 aa13.64□□□□□ -0.23
CCDC171-202ENST00000432954 CALCOCO1Q9P1Z2 691 aa13.64□□□□□ -0.23
CCDC171-202ENST00000432954 KIF1CO43896 1103 aaKnown RBP13.64□□□□□ -0.23
CCDC171-202ENST00000432954 BRMS1Q9HCU9 246 aa13.64□□□□□ -0.23
CCDC171-202ENST00000432954 DONSONQ9NYP3 566 aa13.64□□□□□ -0.23
CCDC171-202ENST00000432954 CSPP1Q1MSJ5 1256 aa13.63□□□□□ -0.23
CCDC171-202ENST00000432954 TSHZ1Q6ZSZ6 1077 aa13.63□□□□□ -0.23
CCDC171-202ENST00000432954 BORCS6Q96GS4 357 aa13.63□□□□□ -0.23
CCDC171-202ENST00000432954 UNC13AQ9UPW8 1703 aa13.63□□□□□ -0.23
CCDC171-202ENST00000432954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.62□□□□□ -0.23
CCDC171-202ENST00000432954 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
CCDC171-202ENST00000432954 HSP90AB4PQ58FF6 505 aa13.62□□□□□ -0.23
CCDC171-202ENST00000432954 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
CCDC171-202ENST00000432954 FAM9BQ8IZU0 186 aa13.62□□□□□ -0.23
CCDC171-202ENST00000432954 NOP2P46087 812 aaKnown RBP13.61□□□□□ -0.23
CCDC171-202ENST00000432954 GTF2A1P52655 376 aaPredicted RBP13.61□□□□□ -0.23
CCDC171-202ENST00000432954 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
CCDC171-202ENST00000432954 MSNP26038 577 aaKnown RBP13.61□□□□□ -0.23
CCDC171-202ENST00000432954 SLC4A3P48751 1232 aa13.61□□□□□ -0.23
CCDC171-202ENST00000432954 ATP2B3Q16720 1220 aa13.61□□□□□ -0.23
CCDC171-202ENST00000432954 HS1BP3Q53T59 392 aa13.6□□□□□ -0.23
CCDC171-202ENST00000432954 ITFG2Q969R8 447 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms