RNA–Protein interactions for RNA: ENST00000432292.7

PMS1-212, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-212ENST00000432292 PPP4R2Q9NY27 417 aa22.21■■□□□ 1.15
PMS1-212ENST00000432292 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.21■■□□□ 1.15
PMS1-212ENST00000432292 KIF7Q2M1P5 1343 aa22.21■■□□□ 1.15
PMS1-212ENST00000432292 CLASP1Q7Z460 1538 aa22.2■■□□□ 1.14
PMS1-212ENST00000432292 ARHGEF12Q9NZN5 1544 aa22.18■■□□□ 1.14
PMS1-212ENST00000432292 ARHGEF5Q12774 1597 aa22.18■■□□□ 1.14
PMS1-212ENST00000432292 PLEKHH2Q8IVE3 1493 aa22.18■■□□□ 1.14
PMS1-212ENST00000432292 CARD11Q9BXL7 1154 aa22.18■■□□□ 1.14
PMS1-212ENST00000432292 RTL5Q5HYW3 569 aaPredicted RBP22.17■■□□□ 1.14
PMS1-212ENST00000432292 USP47Q96K76 1375 aa22.16■■□□□ 1.14
PMS1-212ENST00000432292 ZCCHC11Q5TAX3 1644 aaKnown RBP22.15■■□□□ 1.14
PMS1-212ENST00000432292 PLCH2O75038 1416 aa22.14■■□□□ 1.13
PMS1-212ENST00000432292 TRAPPC8Q9Y2L5 1435 aa22.14■■□□□ 1.13
PMS1-212ENST00000432292 SPATA31E1Q6ZUB1 1445 aa22.12■■□□□ 1.13
PMS1-212ENST00000432292 CNTLNQ9NXG0 1405 aa22.12■■□□□ 1.13
PMS1-212ENST00000432292 FAM9BQ8IZU0 186 aa22.12■■□□□ 1.13
PMS1-212ENST00000432292 FAM135AQ9P2D6 1515 aa22.11■■□□□ 1.13
PMS1-212ENST00000432292 MYO5CQ9NQX4 1742 aa22.11■■□□□ 1.13
PMS1-212ENST00000432292 SPAG9O60271 1321 aaKnown RBP22.1■■□□□ 1.13
PMS1-212ENST00000432292 PRKRIP1Q9H875 184 aaPredicted RBP22.1■■□□□ 1.13
PMS1-212ENST00000432292 ST20-MTHFSA0A0A6YYL1 179 aa22.09■■□□□ 1.13
PMS1-212ENST00000432292 CCDC144AA2RUR9 1427 aa22.07■■□□□ 1.12
PMS1-212ENST00000432292 SENP3-EIF4A1A0A087X0R7 540 aa22.07■■□□□ 1.12
PMS1-212ENST00000432292 MRS2Q9HD23 443 aa22.07■■□□□ 1.12
PMS1-212ENST00000432292 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
PMS1-212ENST00000432292 NBPF1Q3BBV0 1214 aa22.06■■□□□ 1.12
PMS1-212ENST00000432292 UHRF1BP1LA0JNW5 1464 aa22.05■■□□□ 1.12
PMS1-212ENST00000432292 KDM5DQ9BY66 1539 aa22.02■■□□□ 1.12
PMS1-212ENST00000432292 ANP32AP39687 249 aaKnown RBP22.02■■□□□ 1.12
PMS1-212ENST00000432292 ROCK2O75116 1388 aaKnown RBP22.01■■□□□ 1.11
PMS1-212ENST00000432292 ERICH6BQ5W0A0 696 aa22.01■■□□□ 1.11
PMS1-212ENST00000432292 PLA2R1Q13018 1463 aa22.01■■□□□ 1.11
PMS1-212ENST00000432292 NPM1P06748 294 aaKnown RBP eCLIP22.01■■□□□ 1.11
PMS1-212ENST00000432292 ZBTB47Q9UFB7 747 aaPredicted RBP22.01■■□□□ 1.11
PMS1-212ENST00000432292 KIF3BO15066 747 aa21.99■■□□□ 1.11
PMS1-212ENST00000432292 WDR7Q9Y4E6 1490 aa21.98■■□□□ 1.11
PMS1-212ENST00000432292 BCORL1Q5H9F3 1711 aa21.97■■□□□ 1.11
PMS1-212ENST00000432292 SCAPERQ9BY12 1400 aa21.96■■□□□ 1.11
PMS1-212ENST00000432292 NPM2Q86SE8 214 aaKnown RBP21.96■■□□□ 1.11
PMS1-212ENST00000432292 ABCC1P33527 1531 aa21.96■■□□□ 1.11
PMS1-212ENST00000432292 ASXL2Q76L83 1435 aa21.95■■□□□ 1.1
PMS1-212ENST00000432292 DUOX2Q9NRD8 1548 aa21.95■■□□□ 1.1
PMS1-212ENST00000432292 IPO9Q96P70 1041 aaKnown RBP21.95■■□□□ 1.1
PMS1-212ENST00000432292 UHRF1BP1Q6BDS2 1440 aa21.95■■□□□ 1.1
PMS1-212ENST00000432292 FANCAO15360 1455 aa21.95■■□□□ 1.1
PMS1-212ENST00000432292 MAST1Q9Y2H9 1570 aa21.94■■□□□ 1.1
PMS1-212ENST00000432292 RALGAPBQ86X10 1494 aa21.94■■□□□ 1.1
PMS1-212ENST00000432292 LAS1LQ9Y4W2 734 aaKnown RBP21.92■■□□□ 1.1
PMS1-212ENST00000432292 KDM5CP41229 1560 aa21.91■■□□□ 1.1
PMS1-212ENST00000432292 PLXNC1O60486 1568 aa21.9■■□□□ 1.1
PMS1-212ENST00000432292 ERBINQ96RT1 1412 aa21.89■■□□□ 1.09
PMS1-212ENST00000432292 A2MP01023 1474 aa21.88■■□□□ 1.09
PMS1-212ENST00000432292 UNC13BO14795 1591 aa21.88■■□□□ 1.09
PMS1-212ENST00000432292 DHX29Q7Z478 1369 aaKnown RBP21.88■■□□□ 1.09
PMS1-212ENST00000432292 ADGRL1O94910 1474 aa21.88■■□□□ 1.09
PMS1-212ENST00000432292 PRAG1Q86YV5 1406 aa21.87■■□□□ 1.09
PMS1-212ENST00000432292 EIF5BO60841 1220 aaKnown RBP21.87■■□□□ 1.09
PMS1-212ENST00000432292 IQGAP3Q86VI3 1631 aa21.83■■□□□ 1.09
PMS1-212ENST00000432292 NEFMP07197 916 aa21.83■■□□□ 1.09
PMS1-212ENST00000432292 ZFYVE16Q7Z3T8 1539 aa21.81■■□□□ 1.08
PMS1-212ENST00000432292 GGT6Q6P531 493 aa21.81■■□□□ 1.08
PMS1-212ENST00000432292 TMC1Q8TDI8 760 aa21.8■■□□□ 1.08
PMS1-212ENST00000432292 CHGAP10645 457 aaKnown RBP21.79■■□□□ 1.08
PMS1-212ENST00000432292 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
PMS1-212ENST00000432292 RTEL1-TNFRSF6BF6WH68 1400 aa21.79■■□□□ 1.08
PMS1-212ENST00000432292 RAPGEF3O95398 923 aa21.78■■□□□ 1.08
PMS1-212ENST00000432292 ATP7AQ04656 1500 aa21.78■■□□□ 1.08
PMS1-212ENST00000432292 KANK1Q14678 1352 aa21.77■■□□□ 1.08
PMS1-212ENST00000432292 ARID4BQ4LE39 1312 aaPredicted RBP21.77■■□□□ 1.08
PMS1-212ENST00000432292 MAGI2Q86UL8 1455 aa21.76■■□□□ 1.07
PMS1-212ENST00000432292 CD109Q6YHK3 1445 aa21.76■■□□□ 1.07
PMS1-212ENST00000432292 POLR1AO95602 1720 aaPredicted RBP21.76■■□□□ 1.07
PMS1-212ENST00000432292 CC2D1BQ5T0F9 858 aaKnown RBP21.75■■□□□ 1.07
PMS1-212ENST00000432292 TESK2Q96S53 571 aa21.75■■□□□ 1.07
PMS1-212ENST00000432292 BRPF3Q9ULD4 1205 aa21.75■■□□□ 1.07
PMS1-212ENST00000432292 ABCA9Q8IUA7 1624 aa21.74■■□□□ 1.07
PMS1-212ENST00000432292 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
PMS1-212ENST00000432292 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
PMS1-212ENST00000432292 ZBED9Q6R2W3 1325 aa21.73■■□□□ 1.07
PMS1-212ENST00000432292 UBE2Q2Q8WVN8 375 aa21.73■■□□□ 1.07
PMS1-212ENST00000432292 ATP10AO60312 1499 aa21.73■■□□□ 1.07
PMS1-212ENST00000432292 ARAP3Q8WWN8 1544 aa21.72■■□□□ 1.07
PMS1-212ENST00000432292 TRPM1Q7Z4N2 1603 aa21.72■■□□□ 1.07
PMS1-212ENST00000432292 E9PCH4 1651 aa21.72■■□□□ 1.07
PMS1-212ENST00000432292 PANK3Q9H999 370 aa21.7■■□□□ 1.07
PMS1-212ENST00000432292 TMF1P82094 1093 aa21.68■■□□□ 1.06
PMS1-212ENST00000432292 CFAP65Q6ZU64 1925 aaKnown RBP21.68■■□□□ 1.06
PMS1-212ENST00000432292 UGGT1Q9NYU2 1555 aa21.68■■□□□ 1.06
PMS1-212ENST00000432292 GPRASP1Q5JY77 1395 aa21.67■■□□□ 1.06
PMS1-212ENST00000432292 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
PMS1-212ENST00000432292 PNISRQ8TF01 805 aaKnown RBP21.67■■□□□ 1.06
PMS1-212ENST00000432292 INO80Q9ULG1 1556 aaPredicted RBP21.65■■□□□ 1.06
PMS1-212ENST00000432292 NUTM2DQ5VT03 806 aaPredicted RBP21.64■■□□□ 1.05
PMS1-212ENST00000432292 ADGRF5Q8IZF2 1346 aa21.64■■□□□ 1.05
PMS1-212ENST00000432292 PER1O15534 1290 aaPredicted RBP21.63■■□□□ 1.05
PMS1-212ENST00000432292 MYBBP1AQ9BQG0 1328 aaKnown RBP21.62■■□□□ 1.05
PMS1-212ENST00000432292 ZNF518AQ6AHZ1 1483 aa21.62■■□□□ 1.05
PMS1-212ENST00000432292 WASHC2CQ9Y4E1 1318 aa21.62■■□□□ 1.05
PMS1-212ENST00000432292 CLTCL1P53675 1640 aa21.62■■□□□ 1.05
PMS1-212ENST00000432292 RALBP1Q15311 655 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms