RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 KIAA1107Q9UPP5 1409 aa15.68■□□□□ 0.1
SMPD4-205ENST00000431183 UHRF1BP1LA0JNW5 1464 aa15.68■□□□□ 0.1
SMPD4-205ENST00000431183 CFAP65Q6ZU64 1925 aaKnown RBP15.68■□□□□ 0.1
SMPD4-205ENST00000431183 CDC42BPBQ9Y5S2 1711 aa15.67■□□□□ 0.1
SMPD4-205ENST00000431183 PZPP20742 1482 aa15.67■□□□□ 0.1
SMPD4-205ENST00000431183 CEBPAP49715 358 aaPredicted RBP15.67■□□□□ 0.1
SMPD4-205ENST00000431183 TMEM132EQ6IEE7 984 aa15.66■□□□□ 0.1
SMPD4-205ENST00000431183 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-205ENST00000431183 ROCK2O75116 1388 aaKnown RBP15.65■□□□□ 0.1
SMPD4-205ENST00000431183 RIMBP3CA6NJZ7 1639 aa15.64■□□□□ 0.09
SMPD4-205ENST00000431183 RIMBP3BA6NNM3 1639 aa15.64■□□□□ 0.09
SMPD4-205ENST00000431183 RIMBP3Q9UFD9 1639 aa15.64■□□□□ 0.09
SMPD4-205ENST00000431183 FAM9BQ8IZU0 186 aa15.64■□□□□ 0.09
SMPD4-205ENST00000431183 TIMELESSQ9UNS1 1208 aa15.64■□□□□ 0.09
SMPD4-205ENST00000431183 SALL2Q9Y467 1007 aaPredicted RBP15.64■□□□□ 0.09
SMPD4-205ENST00000431183 MYO5CQ9NQX4 1742 aa15.62■□□□□ 0.09
SMPD4-205ENST00000431183 CFAP70Q5T0N1 1121 aa15.62■□□□□ 0.09
SMPD4-205ENST00000431183 YEATS2Q9ULM3 1422 aa15.62■□□□□ 0.09
SMPD4-205ENST00000431183 TRAK1Q9UPV9 953 aa15.62■□□□□ 0.09
SMPD4-205ENST00000431183 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
SMPD4-205ENST00000431183 PREX2Q70Z35 1606 aa15.61■□□□□ 0.09
SMPD4-205ENST00000431183 WASHC2AQ641Q2 1341 aa15.6■□□□□ 0.09
SMPD4-205ENST00000431183 TMC1Q8TDI8 760 aa15.58■□□□□ 0.09
SMPD4-205ENST00000431183 DHX29Q7Z478 1369 aaKnown RBP15.58■□□□□ 0.08
SMPD4-205ENST00000431183 USP47Q96K76 1375 aa15.57■□□□□ 0.08
SMPD4-205ENST00000431183 CC2D1BQ5T0F9 858 aaKnown RBP15.56■□□□□ 0.08
SMPD4-205ENST00000431183 FAM135AQ9P2D6 1515 aa15.56■□□□□ 0.08
SMPD4-205ENST00000431183 NUTM2FA1L443 756 aa15.56■□□□□ 0.08
SMPD4-205ENST00000431183 TNNT2P45379 298 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-205ENST00000431183 ADGRL2O95490 1459 aa15.54■□□□□ 0.08
SMPD4-205ENST00000431183 RPRD2Q5VT52 1461 aaKnown RBP15.54■□□□□ 0.08
SMPD4-205ENST00000431183 ABCC1P33527 1531 aa15.54■□□□□ 0.08
SMPD4-205ENST00000431183 IDI1Q13907 227 aa15.54■□□□□ 0.08
SMPD4-205ENST00000431183 ADGRF5Q8IZF2 1346 aa15.53■□□□□ 0.08
SMPD4-205ENST00000431183 ZNF518AQ6AHZ1 1483 aa15.53■□□□□ 0.08
SMPD4-205ENST00000431183 KIF7Q2M1P5 1343 aa15.52■□□□□ 0.08
SMPD4-205ENST00000431183 A2MP01023 1474 aa15.52■□□□□ 0.08
SMPD4-205ENST00000431183 MRS2Q9HD23 443 aa15.52■□□□□ 0.07
SMPD4-205ENST00000431183 ATP7AQ04656 1500 aa15.52■□□□□ 0.07
SMPD4-205ENST00000431183 GCC2Q8IWJ2 1684 aa15.52■□□□□ 0.07
SMPD4-205ENST00000431183 SHANK2Q9UPX8 1470 aa15.51■□□□□ 0.07
SMPD4-205ENST00000431183 BCL11AQ9H165 835 aa15.5■□□□□ 0.07
SMPD4-205ENST00000431183 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
SMPD4-205ENST00000431183 HNRNPUQ00839 825 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMPD4-205ENST00000431183 CCDC184Q52MB2 194 aa15.49■□□□□ 0.07
SMPD4-205ENST00000431183 DUOX2Q9NRD8 1548 aa15.49■□□□□ 0.07
SMPD4-205ENST00000431183 POGZQ7Z3K3 1410 aa15.49■□□□□ 0.07
SMPD4-205ENST00000431183 ARHGEF5Q12774 1597 aa15.47■□□□□ 0.07
SMPD4-205ENST00000431183 ERBINQ96RT1 1412 aa15.46■□□□□ 0.07
SMPD4-205ENST00000431183 RBM33Q96EV2 1170 aaKnown RBP15.45■□□□□ 0.06
SMPD4-205ENST00000431183 POGKQ9P215 609 aa15.45■□□□□ 0.06
SMPD4-205ENST00000431183 PLA2R1Q13018 1463 aa15.45■□□□□ 0.06
SMPD4-205ENST00000431183 ADGBQ8N7X0 1667 aa15.45■□□□□ 0.06
SMPD4-205ENST00000431183 COL17A1Q9UMD9 1497 aaPredicted RBP15.44■□□□□ 0.06
SMPD4-205ENST00000431183 ZFYVE16Q7Z3T8 1539 aa15.44■□□□□ 0.06
SMPD4-205ENST00000431183 ABCA9Q8IUA7 1624 aa15.43■□□□□ 0.06
SMPD4-205ENST00000431183 MINK1Q8N4C8 1332 aaPredicted RBP15.43■□□□□ 0.06
SMPD4-205ENST00000431183 SLC26A8Q96RN1 970 aa15.42■□□□□ 0.06
SMPD4-205ENST00000431183 CCDC7Q96M83 1385 aa15.41■□□□□ 0.06
SMPD4-205ENST00000431183 PANK3Q9H999 370 aa15.41■□□□□ 0.06
SMPD4-205ENST00000431183 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
SMPD4-205ENST00000431183 TMF1P82094 1093 aa15.41■□□□□ 0.06
SMPD4-205ENST00000431183 TEX14Q8IWB6 1497 aa15.41■□□□□ 0.06
SMPD4-205ENST00000431183 DNAJC5Q9H3Z4 198 aa15.4■□□□□ 0.06
SMPD4-205ENST00000431183 RTEL1-TNFRSF6BF6WH68 1400 aa15.4■□□□□ 0.06
SMPD4-205ENST00000431183 CROCC2H7BZ55 1655 aa15.4■□□□□ 0.06
SMPD4-205ENST00000431183 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
SMPD4-205ENST00000431183 SOX12O15370 315 aa15.39■□□□□ 0.05
SMPD4-205ENST00000431183 NOS1P29475 1434 aa15.38■□□□□ 0.05
SMPD4-205ENST00000431183 NPATQ14207 1427 aa15.37■□□□□ 0.05
SMPD4-205ENST00000431183 CABP2Q9NPB3 220 aa15.36■□□□□ 0.05
SMPD4-205ENST00000431183 WAPLQ7Z5K2 1190 aa15.36■□□□□ 0.05
SMPD4-205ENST00000431183 VGFO15240 615 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-205ENST00000431183 PPM1GO15355 546 aaPredicted RBP15.34■□□□□ 0.05
SMPD4-205ENST00000431183 TXNDC2Q86VQ3 553 aa15.34■□□□□ 0.05
SMPD4-205ENST00000431183 KNSTRNQ9Y448 316 aa15.34■□□□□ 0.05
SMPD4-205ENST00000431183 NEO1Q92859 1461 aa15.34■□□□□ 0.05
SMPD4-205ENST00000431183 PRKRIP1Q9H875 184 aaPredicted RBP15.34■□□□□ 0.05
SMPD4-205ENST00000431183 ATP10AO60312 1499 aa15.33■□□□□ 0.05
SMPD4-205ENST00000431183 SLC12A5Q9H2X9 1139 aa15.32■□□□□ 0.04
SMPD4-205ENST00000431183 PRAM1Q96QH2 718 aa15.31■□□□□ 0.04
SMPD4-205ENST00000431183 C14orf37Q86TY3 774 aa15.31■□□□□ 0.04
SMPD4-205ENST00000431183 DISP3Q9P2K9 1392 aa15.31■□□□□ 0.04
SMPD4-205ENST00000431183 KIDINS220Q9ULH0 1771 aa15.31■□□□□ 0.04
SMPD4-205ENST00000431183 MAST1Q9Y2H9 1570 aa15.3■□□□□ 0.04
SMPD4-205ENST00000431183 PRAG1Q86YV5 1406 aa15.3■□□□□ 0.04
SMPD4-205ENST00000431183 PRDM15P57071 1507 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-205ENST00000431183 DIP2BQ9P265 1576 aa15.29■□□□□ 0.04
SMPD4-205ENST00000431183 MLH3Q9UHC1 1453 aa15.29■□□□□ 0.04
SMPD4-205ENST00000431183 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMPD4-205ENST00000431183 SLC52A1Q9NWF4 448 aa15.28■□□□□ 0.04
SMPD4-205ENST00000431183 ZMYM3Q14202 1370 aa15.28■□□□□ 0.04
SMPD4-205ENST00000431183 HECW2Q9P2P5 1572 aa15.28■□□□□ 0.04
SMPD4-205ENST00000431183 NEUROD2Q15784 382 aa15.27■□□□□ 0.04
SMPD4-205ENST00000431183 CENPJQ9HC77 1338 aaPredicted RBP15.27■□□□□ 0.03
SMPD4-205ENST00000431183 ZBTB7CA1YPR0 619 aa15.25■□□□□ 0.03
SMPD4-205ENST00000431183 TESK2Q96S53 571 aa15.25■□□□□ 0.03
SMPD4-205ENST00000431183 PLXNC1O60486 1568 aa15.25■□□□□ 0.03
SMPD4-205ENST00000431183 ABCA6Q8N139 1617 aa15.25■□□□□ 0.03
SMPD4-205ENST00000431183 NCKAP5LQ9HCH0 1330 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms