RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 MPHOSPH10O00566 681 aaKnown RBP6.86□□□□□ -1.31
PTPN4-203ENST00000430976 ISY1Q9ULR0 285 aaKnown RBP6.86□□□□□ -1.31
PTPN4-203ENST00000430976 SGSM3Q96HU1 749 aa6.86□□□□□ -1.31
PTPN4-203ENST00000430976 SLC52A1Q9NWF4 448 aa6.86□□□□□ -1.31
PTPN4-203ENST00000430976 PNMA2Q9UL42 364 aa6.86□□□□□ -1.31
PTPN4-203ENST00000430976 RALBP1Q15311 655 aa6.85□□□□□ -1.31
PTPN4-203ENST00000430976 RINLQ6ZS11 566 aa6.85□□□□□ -1.31
PTPN4-203ENST00000430976 PDE6BP35913 854 aa6.85□□□□□ -1.31
PTPN4-203ENST00000430976 MFSD4BQ5TF39 518 aa6.85□□□□□ -1.31
PTPN4-203ENST00000430976 SH3BP1Q9Y3L3 701 aa6.85□□□□□ -1.31
PTPN4-203ENST00000430976 PES1O00541 588 aaKnown RBP6.84□□□□□ -1.31
PTPN4-203ENST00000430976 SH3BP5O60239 455 aa6.84□□□□□ -1.31
PTPN4-203ENST00000430976 HSP90AB3PQ58FF7 597 aa6.84□□□□□ -1.31
PTPN4-203ENST00000430976 GET4Q7L5D6 327 aaPredicted RBP6.84□□□□□ -1.31
PTPN4-203ENST00000430976 MYO15BQ96JP2 1530 aa6.84□□□□□ -1.31
PTPN4-203ENST00000430976 ZNF500O60304 480 aaPredicted RBP6.83□□□□□ -1.32
PTPN4-203ENST00000430976 EP400NLQ6ZTU2 488 aa6.83□□□□□ -1.32
PTPN4-203ENST00000430976 ANKRD62A6NC57 917 aa6.83□□□□□ -1.32
PTPN4-203ENST00000430976 PAK3O75914 559 aaPredicted RBP6.83□□□□□ -1.32
PTPN4-203ENST00000430976 PPP4R3BQ5MIZ7 849 aa6.83□□□□□ -1.32
PTPN4-203ENST00000430976 MEX3CQ5U5Q3 659 aaKnown RBP6.83□□□□□ -1.32
PTPN4-203ENST00000430976 ATL2Q8NHH9 583 aa6.83□□□□□ -1.32
PTPN4-203ENST00000430976 CT47B1P0C2W7 299 aaPredicted RBP6.83□□□□□ -1.32
PTPN4-203ENST00000430976 TPD52L2O43399 206 aaKnown RBP6.82□□□□□ -1.32
PTPN4-203ENST00000430976 WDR78Q5VTH9 848 aa6.82□□□□□ -1.32
PTPN4-203ENST00000430976 RIPOR2Q9Y4F9 1068 aa6.82□□□□□ -1.32
PTPN4-203ENST00000430976 TTC36A6NLP5 189 aa6.82□□□□□ -1.32
PTPN4-203ENST00000430976 FANCIQ9NVI1 1328 aa6.82□□□□□ -1.32
PTPN4-203ENST00000430976 FAM43AQ8N2R8 423 aa6.82□□□□□ -1.32
PTPN4-203ENST00000430976 TMEM51Q9NW97 253 aa6.82□□□□□ -1.32
PTPN4-203ENST00000430976 CGNQ9P2M7 1197 aaKnown RBP6.81□□□□□ -1.32
PTPN4-203ENST00000430976 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.81□□□□□ -1.32
PTPN4-203ENST00000430976 PDCL3Q9H2J4 239 aa6.81□□□□□ -1.32
PTPN4-203ENST00000430976 TERF2IPQ9NYB0 399 aa6.81□□□□□ -1.32
PTPN4-203ENST00000430976 STK26Q9P289 416 aa6.81□□□□□ -1.32
PTPN4-203ENST00000430976 TCERG1O14776 1098 aaKnown RBP6.8□□□□□ -1.32
PTPN4-203ENST00000430976 PRDM4Q9UKN5 801 aa6.8□□□□□ -1.32
PTPN4-203ENST00000430976 CCDC180Q9P1Z9 1646 aa6.8□□□□□ -1.32
PTPN4-203ENST00000430976 HSCBQ8IWL3 235 aa6.79□□□□□ -1.32
PTPN4-203ENST00000430976 HMGN5P82970 282 aaKnown RBP6.79□□□□□ -1.32
PTPN4-203ENST00000430976 VTI1AQ96AJ9 217 aa6.79□□□□□ -1.32
PTPN4-203ENST00000430976 PAIP2Q9BPZ3 127 aaKnown RBP6.79□□□□□ -1.32
PTPN4-203ENST00000430976 FAM13BQ9NYF5 915 aa6.79□□□□□ -1.32
PTPN4-203ENST00000430976 CHGAP10645 457 aaKnown RBP6.79□□□□□ -1.32
PTPN4-203ENST00000430976 NBPF1Q3BBV0 1214 aa6.79□□□□□ -1.32
PTPN4-203ENST00000430976 EGFL6Q8IUX8 553 aa6.78□□□□□ -1.32
PTPN4-203ENST00000430976 STK11IPQ8N1F8 1099 aa6.78□□□□□ -1.32
PTPN4-203ENST00000430976 CALR3Q96L12 384 aaKnown RBP6.78□□□□□ -1.32
PTPN4-203ENST00000430976 MICAL1Q8TDZ2 1067 aa6.78□□□□□ -1.32
PTPN4-203ENST00000430976 PAX3P23760 479 aa6.78□□□□□ -1.32
PTPN4-203ENST00000430976 DDRGK1Q96HY6 314 aa6.78□□□□□ -1.32
PTPN4-203ENST00000430976 SLC24A3Q9HC58 644 aa6.77□□□□□ -1.33
PTPN4-203ENST00000430976 PPME1Q9Y570 386 aa6.77□□□□□ -1.33
PTPN4-203ENST00000430976 GOLGA6CA6NDK9 693 aa6.76□□□□□ -1.33
PTPN4-203ENST00000430976 GOLGA6BA6NDN3 693 aa6.76□□□□□ -1.33
PTPN4-203ENST00000430976 GOLGA6DP0CG33 693 aa6.76□□□□□ -1.33
PTPN4-203ENST00000430976 GOLGA6AQ9NYA3 693 aa6.76□□□□□ -1.33
PTPN4-203ENST00000430976 CTDP1Q9Y5B0 961 aaPredicted RBP6.76□□□□□ -1.33
PTPN4-203ENST00000430976 ERBB3P21860 1342 aa6.76□□□□□ -1.33
PTPN4-203ENST00000430976 NBPF11Q86T75 865 aa6.76□□□□□ -1.33
PTPN4-203ENST00000430976 IRF6O14896 467 aa6.76□□□□□ -1.33
PTPN4-203ENST00000430976 MAP2K1Q02750 393 aaPredicted RBP6.76□□□□□ -1.33
PTPN4-203ENST00000430976 ACRBPQ8NEB7 543 aa6.76□□□□□ -1.33
PTPN4-203ENST00000430976 ANKRD13AQ8IZ07 590 aa6.76□□□□□ -1.33
PTPN4-203ENST00000430976 PROCA1Q8NCQ7 364 aaPredicted RBP6.76□□□□□ -1.33
PTPN4-203ENST00000430976 ZFYVE27Q5T4F4 411 aa6.75□□□□□ -1.33
PTPN4-203ENST00000430976 PRR29P0C7W0 189 aa6.75□□□□□ -1.33
PTPN4-203ENST00000430976 ZNF777Q9ULD5 760 aaPredicted RBP6.75□□□□□ -1.33
PTPN4-203ENST00000430976 IPO8O15397 1037 aaKnown RBP6.74□□□□□ -1.33
PTPN4-203ENST00000430976 LMNB1P20700 586 aa6.74□□□□□ -1.33
PTPN4-203ENST00000430976 ZNF280DQ6N043 979 aa6.74□□□□□ -1.33
PTPN4-203ENST00000430976 FRMD4BQ9Y2L6 1034 aa6.74□□□□□ -1.33
PTPN4-203ENST00000430976 WDHD1O75717 1129 aaPredicted RBP6.74□□□□□ -1.33
PTPN4-203ENST00000430976 TDO2P48775 406 aa6.74□□□□□ -1.33
PTPN4-203ENST00000430976 ZCRB1Q8TBF4 217 aaKnown RBP6.74□□□□□ -1.33
PTPN4-203ENST00000430976 HDAC1Q13547 482 aaPredicted RBP6.74□□□□□ -1.33
PTPN4-203ENST00000430976 L1TD1Q5T7N2 865 aaKnown RBP6.74□□□□□ -1.33
PTPN4-203ENST00000430976 GABBR1Q9UBS5 961 aa6.74□□□□□ -1.33
PTPN4-203ENST00000430976 MAP4K4O95819 1239 aaPredicted RBP6.73□□□□□ -1.33
PTPN4-203ENST00000430976 TERF1P54274 439 aa6.73□□□□□ -1.33
PTPN4-203ENST00000430976 ZRSR2Q15696 482 aaKnown RBP6.73□□□□□ -1.33
PTPN4-203ENST00000430976 RIOK3O14730 519 aaKnown RBP6.73□□□□□ -1.33
PTPN4-203ENST00000430976 NBPF20Q3BBV1 942 aa6.73□□□□□ -1.33
PTPN4-203ENST00000430976 CIZ1Q9ULV3 898 aaPredicted RBP6.73□□□□□ -1.33
PTPN4-203ENST00000430976 NRDCO43847 1150 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 STK10O94804 968 aaKnown RBP6.72□□□□□ -1.33
PTPN4-203ENST00000430976 SSFA2P28290 1259 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 KCNJ4P48050 445 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 NBPF6Q5VWK0 638 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 ZNF771Q7L3S4 317 aaPredicted RBP6.72□□□□□ -1.33
PTPN4-203ENST00000430976 NBPF5PQ86XG9 351 aaPredicted RBP6.72□□□□□ -1.33
PTPN4-203ENST00000430976 CLUAP1Q96AJ1 413 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 EVI5LQ96CN4 794 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 NBPF4Q96M43 638 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 CARD10Q9BWT7 1032 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 ATP1B4Q9UN42 357 aaPredicted RBP6.72□□□□□ -1.33
PTPN4-203ENST00000430976 NUTM2GQ5VZR2 741 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 RETREG2Q8NC44 543 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 PKD2Q13563 968 aa6.72□□□□□ -1.33
PTPN4-203ENST00000430976 GSE1Q14687 1217 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 184.8 ms