RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 INO80Q9ULG1 1556 aaPredicted RBP19.53■□□□□ 0.72
HOXC4-202ENST00000430889 DEPDC5O75140 1603 aa19.52■□□□□ 0.72
HOXC4-202ENST00000430889 KIF7Q2M1P5 1343 aa19.51■□□□□ 0.71
HOXC4-202ENST00000430889 USP47Q96K76 1375 aa19.51■□□□□ 0.71
HOXC4-202ENST00000430889 TRPM1Q7Z4N2 1603 aa19.5■□□□□ 0.71
HOXC4-202ENST00000430889 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
HOXC4-202ENST00000430889 CCDC144AA2RUR9 1427 aa19.46■□□□□ 0.71
HOXC4-202ENST00000430889 ASXL2Q76L83 1435 aa19.46■□□□□ 0.71
HOXC4-202ENST00000430889 FANCAO15360 1455 aa19.46■□□□□ 0.71
HOXC4-202ENST00000430889 LAMC1P11047 1609 aa19.46■□□□□ 0.71
HOXC4-202ENST00000430889 E9PCH4 1651 aa19.45■□□□□ 0.7
HOXC4-202ENST00000430889 ATP7AQ04656 1500 aa19.45■□□□□ 0.7
HOXC4-202ENST00000430889 VWDEQ8N2E2 1590 aa19.45■□□□□ 0.7
HOXC4-202ENST00000430889 PRAG1Q86YV5 1406 aa19.44■□□□□ 0.7
HOXC4-202ENST00000430889 A2MP01023 1474 aa19.44■□□□□ 0.7
HOXC4-202ENST00000430889 ARID4BQ4LE39 1312 aaPredicted RBP19.44■□□□□ 0.7
HOXC4-202ENST00000430889 EIF2AK4Q9P2K8 1649 aaKnown RBP19.42■□□□□ 0.7
HOXC4-202ENST00000430889 SPAG9O60271 1321 aaKnown RBP19.42■□□□□ 0.7
HOXC4-202ENST00000430889 TET3O43151 1660 aa19.4■□□□□ 0.7
HOXC4-202ENST00000430889 DHX29Q7Z478 1369 aaKnown RBP19.4■□□□□ 0.7
HOXC4-202ENST00000430889 GPRASP1Q5JY77 1395 aa19.4■□□□□ 0.7
HOXC4-202ENST00000430889 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
HOXC4-202ENST00000430889 PRKRIP1Q9H875 184 aaPredicted RBP19.4■□□□□ 0.7
HOXC4-202ENST00000430889 SPHKAPQ2M3C7 1700 aa19.39■□□□□ 0.69
HOXC4-202ENST00000430889 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
HOXC4-202ENST00000430889 AFAP1Q8N556 730 aa19.39■□□□□ 0.69
HOXC4-202ENST00000430889 MROH1Q8NDA8 1641 aa19.39■□□□□ 0.69
HOXC4-202ENST00000430889 TRPM2O94759 1503 aa19.39■□□□□ 0.69
HOXC4-202ENST00000430889 ADGRL1O94910 1474 aa19.38■□□□□ 0.69
HOXC4-202ENST00000430889 ZNF326Q5BKZ1 582 aaKnown RBP19.38■□□□□ 0.69
HOXC4-202ENST00000430889 DCAF11Q8TEB1 546 aa19.38■□□□□ 0.69
HOXC4-202ENST00000430889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
HOXC4-202ENST00000430889 SUPT16HQ9Y5B9 1047 aaKnown RBP19.37■□□□□ 0.69
HOXC4-202ENST00000430889 KIDINS220Q9ULH0 1771 aa19.37■□□□□ 0.69
HOXC4-202ENST00000430889 CEP152O94986 1710 aa19.37■□□□□ 0.69
HOXC4-202ENST00000430889 RNF17Q9BXT8 1623 aaKnown RBP19.37■□□□□ 0.69
HOXC4-202ENST00000430889 PRDM15P57071 1507 aaPredicted RBP19.37■□□□□ 0.69
HOXC4-202ENST00000430889 PTPRTO14522 1441 aa19.36■□□□□ 0.69
HOXC4-202ENST00000430889 CARD11Q9BXL7 1154 aa19.35■□□□□ 0.69
HOXC4-202ENST00000430889 SCAPERQ9BY12 1400 aa19.35■□□□□ 0.69
HOXC4-202ENST00000430889 CFAP74Q9C0B2 1584 aa19.34■□□□□ 0.69
HOXC4-202ENST00000430889 ROCK2O75116 1388 aaKnown RBP19.33■□□□□ 0.69
HOXC4-202ENST00000430889 KDM2AQ9Y2K7 1162 aa19.33■□□□□ 0.68
HOXC4-202ENST00000430889 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
HOXC4-202ENST00000430889 CLTCL1P53675 1640 aa19.32■□□□□ 0.68
HOXC4-202ENST00000430889 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
HOXC4-202ENST00000430889 MADDQ8WXG6 1647 aa19.3■□□□□ 0.68
HOXC4-202ENST00000430889 ZNF518AQ6AHZ1 1483 aa19.29■□□□□ 0.68
HOXC4-202ENST00000430889 ST20-MTHFSA0A0A6YYL1 179 aa19.28■□□□□ 0.68
HOXC4-202ENST00000430889 LMTK2Q8IWU2 1503 aa19.26■□□□□ 0.67
HOXC4-202ENST00000430889 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
HOXC4-202ENST00000430889 IQGAP1P46940 1657 aa19.25■□□□□ 0.67
HOXC4-202ENST00000430889 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
HOXC4-202ENST00000430889 COL17A1Q9UMD9 1497 aaPredicted RBP19.25■□□□□ 0.67
HOXC4-202ENST00000430889 EFCAB6Q5THR3 1501 aa19.25■□□□□ 0.67
HOXC4-202ENST00000430889 RGL3Q3MIN7 710 aa19.24■□□□□ 0.67
HOXC4-202ENST00000430889 FRMPD1Q5SYB0 1578 aa19.24■□□□□ 0.67
HOXC4-202ENST00000430889 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
HOXC4-202ENST00000430889 CD109Q6YHK3 1445 aa19.23■□□□□ 0.67
HOXC4-202ENST00000430889 MLH3Q9UHC1 1453 aa19.23■□□□□ 0.67
HOXC4-202ENST00000430889 PPRC1Q5VV67 1664 aaKnown RBP19.23■□□□□ 0.67
HOXC4-202ENST00000430889 HECW2Q9P2P5 1572 aa19.22■□□□□ 0.67
HOXC4-202ENST00000430889 KIAA1210Q9ULL0 1709 aa19.22■□□□□ 0.67
HOXC4-202ENST00000430889 KANK1Q14678 1352 aa19.21■□□□□ 0.67
HOXC4-202ENST00000430889 NPM1P06748 294 aaKnown RBP eCLIP19.2■□□□□ 0.66
HOXC4-202ENST00000430889 HNRNPUQ00839 825 aaKnown RBP eCLIP19.2■□□□□ 0.66
HOXC4-202ENST00000430889 IFT172Q9UG01 1749 aa19.2■□□□□ 0.66
HOXC4-202ENST00000430889 MRS2Q9HD23 443 aa19.2■□□□□ 0.66
HOXC4-202ENST00000430889 TESK2Q96S53 571 aa19.19■□□□□ 0.66
HOXC4-202ENST00000430889 ABCA6Q8N139 1617 aa19.18■□□□□ 0.66
HOXC4-202ENST00000430889 NEO1Q92859 1461 aa19.18■□□□□ 0.66
HOXC4-202ENST00000430889 KIF3BO15066 747 aa19.17■□□□□ 0.66
HOXC4-202ENST00000430889 STAC3Q96MF2 364 aa19.17■□□□□ 0.66
HOXC4-202ENST00000430889 KIF1BO60333 1816 aa19.17■□□□□ 0.66
HOXC4-202ENST00000430889 KTN1Q86UP2 1357 aaKnown RBP19.16■□□□□ 0.66
HOXC4-202ENST00000430889 MAP3K4Q9Y6R4 1608 aa19.16■□□□□ 0.66
HOXC4-202ENST00000430889 MROH2AA6NES4 1674 aa19.15■□□□□ 0.66
HOXC4-202ENST00000430889 MYOM2P54296 1465 aa19.14■□□□□ 0.65
HOXC4-202ENST00000430889 DISP3Q9P2K9 1392 aa19.14■□□□□ 0.65
HOXC4-202ENST00000430889 UGGT1Q9NYU2 1555 aa19.13■□□□□ 0.65
HOXC4-202ENST00000430889 ZBED9Q6R2W3 1325 aa19.13■□□□□ 0.65
HOXC4-202ENST00000430889 RICTORQ6R327 1708 aa19.13■□□□□ 0.65
HOXC4-202ENST00000430889 POLR3GLQ9BT43 218 aa19.13■□□□□ 0.65
HOXC4-202ENST00000430889 GLI2P10070 1586 aa19.11■□□□□ 0.65
HOXC4-202ENST00000430889 FKBP8Q14318 412 aa19.11■□□□□ 0.65
HOXC4-202ENST00000430889 ADGRB3O60242 1522 aa19.11■□□□□ 0.65
HOXC4-202ENST00000430889 FAM9BQ8IZU0 186 aa19.1■□□□□ 0.65
HOXC4-202ENST00000430889 DIP2CQ9Y2E4 1556 aa19.1■□□□□ 0.65
HOXC4-202ENST00000430889 NRXN1Q9ULB1 1477 aa19.09■□□□□ 0.65
HOXC4-202ENST00000430889 SCAF11Q99590 1463 aaKnown RBP19.09■□□□□ 0.65
HOXC4-202ENST00000430889 PARD3Q8TEW0 1356 aa19.09■□□□□ 0.65
HOXC4-202ENST00000430889 PER1O15534 1290 aaPredicted RBP19.08■□□□□ 0.65
HOXC4-202ENST00000430889 ABCC3O15438 1527 aa19.07■□□□□ 0.64
HOXC4-202ENST00000430889 BRD4O60885 1362 aaPredicted RBP19.07■□□□□ 0.64
HOXC4-202ENST00000430889 RALBP1Q15311 655 aa19.07■□□□□ 0.64
HOXC4-202ENST00000430889 LRPPRCP42704 1394 aaKnown RBP19.06■□□□□ 0.64
HOXC4-202ENST00000430889 NPATQ14207 1427 aa19.06■□□□□ 0.64
HOXC4-202ENST00000430889 PNISRQ8TF01 805 aaKnown RBP19.05■□□□□ 0.64
HOXC4-202ENST00000430889 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
HOXC4-202ENST00000430889 CAMSAP1Q5T5Y3 1602 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms