RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 CHGAP10645 457 aaKnown RBP8.33□□□□□ -1.08
GYPB-201ENST00000429670 PROX2Q3B8N5 592 aa8.33□□□□□ -1.08
GYPB-201ENST00000429670 DNAJC5Q9H3Z4 198 aa8.33□□□□□ -1.08
GYPB-201ENST00000429670 WBP1LQ9NX94 342 aa8.32□□□□□ -1.08
GYPB-201ENST00000429670 KIAA1468Q9P260 1216 aa8.32□□□□□ -1.08
GYPB-201ENST00000429670 TYW1BQ6NUM6 668 aa8.31□□□□□ -1.08
GYPB-201ENST00000429670 PCDHGA10Q9Y5H3 936 aa8.31□□□□□ -1.08
GYPB-201ENST00000429670 PHF14O94880 888 aa8.3□□□□□ -1.08
GYPB-201ENST00000429670 COL9A1P20849 921 aa8.3□□□□□ -1.08
GYPB-201ENST00000429670 NCKAP5LQ9HCH0 1330 aa8.29□□□□□ -1.08
GYPB-201ENST00000429670 DDX27Q96GQ7 796 aaKnown RBP8.29□□□□□ -1.08
GYPB-201ENST00000429670 LARP6Q9BRS8 491 aaKnown RBP8.29□□□□□ -1.08
GYPB-201ENST00000429670 TSR3Q9UJK0 312 aaKnown RBP8.29□□□□□ -1.08
GYPB-201ENST00000429670 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.27□□□□□ -1.09
GYPB-201ENST00000429670 NKX1-1Q15270 411 aaPredicted RBP8.26□□□□□ -1.09
GYPB-201ENST00000429670 FAM98CQ17RN3 349 aaKnown RBP8.26□□□□□ -1.09
GYPB-201ENST00000429670 EPAS1Q99814 870 aa8.26□□□□□ -1.09
GYPB-201ENST00000429670 NRG2O14511 850 aaPredicted RBP8.25□□□□□ -1.09
GYPB-201ENST00000429670 LRCH3Q96II8 777 aa8.25□□□□□ -1.09
GYPB-201ENST00000429670 C6orf132Q5T0Z8 1188 aa8.24□□□□□ -1.09
GYPB-201ENST00000429670 HPS5Q9UPZ3 1129 aa8.24□□□□□ -1.09
GYPB-201ENST00000429670 TRIM6-TRIM34B2RNG4 842 aa8.23□□□□□ -1.09
GYPB-201ENST00000429670 MFSD10Q14728 455 aa8.23□□□□□ -1.09
GYPB-201ENST00000429670 SEPT9Q9UHD8 586 aaPredicted RBP8.23□□□□□ -1.09
GYPB-201ENST00000429670 PPP4CP60510 307 aa8.22□□□□□ -1.09
GYPB-201ENST00000429670 LCE2BO14633 110 aa8.21□□□□□ -1.1
GYPB-201ENST00000429670 PRKD2Q9BZL6 878 aa8.21□□□□□ -1.1
GYPB-201ENST00000429670 EMILIN3Q9NT22 766 aa8.21□□□□□ -1.1
GYPB-201ENST00000429670 V9GY48 417 aaPredicted RBP8.21□□□□□ -1.1
GYPB-201ENST00000429670 ZNF787Q6DD87 383 aa8.2□□□□□ -1.1
GYPB-201ENST00000429670 PACS2Q86VP3 889 aa8.2□□□□□ -1.1
GYPB-201ENST00000429670 TJAP1Q5JTD0 557 aa8.16□□□□□ -1.1
GYPB-201ENST00000429670 IL21Q9HBE4 155 aa8.15□□□□□ -1.1
GYPB-201ENST00000429670 GTPBP6O43824 516 aaPredicted RBP8.14□□□□□ -1.11
GYPB-201ENST00000429670 PPP1R18Q6NYC8 613 aa8.14□□□□□ -1.11
GYPB-201ENST00000429670 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.14□□□□□ -1.11
GYPB-201ENST00000429670 RBM33Q96EV2 1170 aaKnown RBP8.12□□□□□ -1.11
GYPB-201ENST00000429670 PDZRN3Q9UPQ7 1066 aa8.12□□□□□ -1.11
GYPB-201ENST00000429670 HDGFP51858 240 aaKnown RBP8.11□□□□□ -1.11
GYPB-201ENST00000429670 GGCXP38435 758 aa8.1□□□□□ -1.11
GYPB-201ENST00000429670 MTRQ99707 1265 aa8.1□□□□□ -1.11
GYPB-201ENST00000429670 ZNF775Q96BV0 537 aaPredicted RBP8.09□□□□□ -1.11
GYPB-201ENST00000429670 CAMK2BQ13554 666 aa8.08□□□□□ -1.12
GYPB-201ENST00000429670 SAMD7Q7Z3H4 446 aa8.08□□□□□ -1.12
GYPB-201ENST00000429670 TSKSQ9UJT2 592 aa8.08□□□□□ -1.12
GYPB-201ENST00000429670 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
GYPB-201ENST00000429670 DPYSL4O14531 572 aa8.06□□□□□ -1.12
GYPB-201ENST00000429670 MAP3K7O43318 606 aa8.06□□□□□ -1.12
GYPB-201ENST00000429670 CERKQ8TCT0 537 aa8.06□□□□□ -1.12
GYPB-201ENST00000429670 DDX12PQ92771 950 aa8.06□□□□□ -1.12
GYPB-201ENST00000429670 TMUB1Q9BVT8 246 aa8.06□□□□□ -1.12
GYPB-201ENST00000429670 EN1Q05925 392 aaPredicted RBP8.05□□□□□ -1.12
GYPB-201ENST00000429670 PRSS12P56730 875 aa8.04□□□□□ -1.12
GYPB-201ENST00000429670 ZNF516Q92618 1163 aa8.04□□□□□ -1.12
GYPB-201ENST00000429670 CDCA7LQ96GN5 454 aa8.04□□□□□ -1.12
GYPB-201ENST00000429670 TATDN2Q93075 761 aa8.03□□□□□ -1.12
GYPB-201ENST00000429670 NBPF26B4DH59 902 aa8.02□□□□□ -1.13
GYPB-201ENST00000429670 NBR1Q14596 966 aa8.02□□□□□ -1.13
GYPB-201ENST00000429670 SMAPO00193 183 aa8.01□□□□□ -1.13
GYPB-201ENST00000429670 TSR1Q2NL82 804 aaKnown RBP8.01□□□□□ -1.13
GYPB-201ENST00000429670 PNMA3Q9UL41 463 aa8.01□□□□□ -1.13
GYPB-201ENST00000429670 SPDYE16A6NNV3 312 aaPredicted RBP7.99□□□□□ -1.13
GYPB-201ENST00000429670 DGAT1O75907 488 aa7.99□□□□□ -1.13
GYPB-201ENST00000429670 CADPS2Q86UW7 1296 aa7.99□□□□□ -1.13
GYPB-201ENST00000429670 APLP1P51693 650 aa7.98□□□□□ -1.13
GYPB-201ENST00000429670 PKDCCQ504Y2 493 aa7.98□□□□□ -1.13
GYPB-201ENST00000429670 NKX2-3Q8TAU0 364 aa7.98□□□□□ -1.13
GYPB-201ENST00000429670 RNF40O75150 1001 aa7.97□□□□□ -1.13
GYPB-201ENST00000429670 SLC4A3P48751 1232 aa7.97□□□□□ -1.13
GYPB-201ENST00000429670 SLC19A1P41440 591 aa7.96□□□□□ -1.14
GYPB-201ENST00000429670 FAM198AQ9UFP1 575 aa7.96□□□□□ -1.14
GYPB-201ENST00000429670 PDIA6Q15084 440 aa7.95□□□□□ -1.14
GYPB-201ENST00000429670 SLF2Q8IX21 1173 aa7.95□□□□□ -1.14
GYPB-201ENST00000429670 ZPR1O75312 459 aa7.94□□□□□ -1.14
GYPB-201ENST00000429670 COPS2P61201 443 aa7.94□□□□□ -1.14
GYPB-201ENST00000429670 MYT1Q01538 1121 aa7.94□□□□□ -1.14
GYPB-201ENST00000429670 NUDT18Q6ZVK8 323 aa7.94□□□□□ -1.14
GYPB-201ENST00000429670 PRR14Q9BWN1 585 aa7.94□□□□□ -1.14
GYPB-201ENST00000429670 RBM27Q9P2N5 1060 aaKnown RBP7.93□□□□□ -1.14
GYPB-201ENST00000429670 PRR20EP86478 221 aa7.92□□□□□ -1.14
GYPB-201ENST00000429670 PRR20CP86479 221 aa7.92□□□□□ -1.14
GYPB-201ENST00000429670 PRR20DP86480 221 aa7.92□□□□□ -1.14
GYPB-201ENST00000429670 PRR20BP86481 221 aa7.92□□□□□ -1.14
GYPB-201ENST00000429670 PRR20AP86496 221 aa7.92□□□□□ -1.14
GYPB-201ENST00000429670 ZNF598Q86UK7 904 aaKnown RBP7.92□□□□□ -1.14
GYPB-201ENST00000429670 SPRYD7Q5W111 196 aa7.91□□□□□ -1.14
GYPB-201ENST00000429670 TRIM67Q6ZTA4 783 aa7.91□□□□□ -1.14
GYPB-201ENST00000429670 C3orf80F5H4A9 247 aa7.9□□□□□ -1.14
GYPB-201ENST00000429670 TREML4Q6UXN2 200 aa7.9□□□□□ -1.14
GYPB-201ENST00000429670 SWT1Q5T5J6 900 aaKnown RBP7.89□□□□□ -1.15
GYPB-201ENST00000429670 GRXCR2A6NFK2 248 aa7.88□□□□□ -1.15
GYPB-201ENST00000429670 RNF223E7ERA6 249 aa7.88□□□□□ -1.15
GYPB-201ENST00000429670 POTECB2RU33 542 aa7.87□□□□□ -1.15
GYPB-201ENST00000429670 ANKLE1Q8NAG6 615 aa7.87□□□□□ -1.15
GYPB-201ENST00000429670 PCDHB3Q9Y5E6 796 aa7.87□□□□□ -1.15
GYPB-201ENST00000429670 FAM187AA6NFU0 413 aa7.85□□□□□ -1.15
GYPB-201ENST00000429670 DCAF8L2P0C7V8 631 aa7.85□□□□□ -1.15
GYPB-201ENST00000429670 ZNF697Q5TEC3 545 aa7.84□□□□□ -1.15
GYPB-201ENST00000429670 TTC13Q8NBP0 860 aa7.84□□□□□ -1.15
GYPB-201ENST00000429670 PRIM1P49642 420 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms