RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 MFAP1P55081 439 aaKnown RBP15.89■□□□□ 0.13
LDB3-205ENST00000429277 KIF16BQ96L93 1317 aa15.89■□□□□ 0.13
LDB3-205ENST00000429277 GOLGA6L3A6NEY3 463 aa15.89■□□□□ 0.13
LDB3-205ENST00000429277 MYBBP1AQ9BQG0 1328 aaKnown RBP15.88■□□□□ 0.13
LDB3-205ENST00000429277 LRRFIP1Q32MZ4 808 aaKnown RBP15.88■□□□□ 0.13
LDB3-205ENST00000429277 G3V3G9 751 aa15.87■□□□□ 0.13
LDB3-205ENST00000429277 DCAF8Q5TAQ9 597 aa15.87■□□□□ 0.13
LDB3-205ENST00000429277 CCDC144AA2RUR9 1427 aa15.87■□□□□ 0.13
LDB3-205ENST00000429277 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
LDB3-205ENST00000429277 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
LDB3-205ENST00000429277 RASSF8Q8NHQ8 419 aa15.86■□□□□ 0.13
LDB3-205ENST00000429277 CCDC9Q9Y3X0 531 aaKnown RBP15.86■□□□□ 0.13
LDB3-205ENST00000429277 SLC4A10Q6U841 1118 aa15.86■□□□□ 0.13
LDB3-205ENST00000429277 HNRNPMP52272 730 aaKnown RBP eCLIP15.86■□□□□ 0.13
LDB3-205ENST00000429277 CADPSQ9ULU8 1353 aa15.86■□□□□ 0.13
LDB3-205ENST00000429277 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
LDB3-205ENST00000429277 VGFO15240 615 aaPredicted RBP15.85■□□□□ 0.13
LDB3-205ENST00000429277 ATP6V1DQ9Y5K8 247 aa15.85■□□□□ 0.13
LDB3-205ENST00000429277 IPO9Q96P70 1041 aaKnown RBP15.85■□□□□ 0.13
LDB3-205ENST00000429277 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
LDB3-205ENST00000429277 GOLGA6L1Q8N7Z2 621 aa15.84■□□□□ 0.13
LDB3-205ENST00000429277 DDX11L8A8MPP1 907 aa15.84■□□□□ 0.13
LDB3-205ENST00000429277 CGNL1Q0VF96 1302 aa15.84■□□□□ 0.13
LDB3-205ENST00000429277 TPM3P06753 285 aa15.83■□□□□ 0.12
LDB3-205ENST00000429277 GTF2E1P29083 439 aaPredicted RBP15.83■□□□□ 0.12
LDB3-205ENST00000429277 EVC2Q86UK5 1308 aa15.83■□□□□ 0.12
LDB3-205ENST00000429277 CENPQQ7L2Z9 268 aaPredicted RBP15.82■□□□□ 0.12
LDB3-205ENST00000429277 CEP89Q96ST8 783 aa15.82■□□□□ 0.12
LDB3-205ENST00000429277 E9PSI1 815 aa15.82■□□□□ 0.12
LDB3-205ENST00000429277 FRAT2O75474 233 aaPredicted RBP15.81■□□□□ 0.12
LDB3-205ENST00000429277 SF3A1Q15459 793 aaKnown RBP15.81■□□□□ 0.12
LDB3-205ENST00000429277 COG3Q96JB2 828 aa15.81■□□□□ 0.12
LDB3-205ENST00000429277 JPH4Q96JJ6 628 aa15.81■□□□□ 0.12
LDB3-205ENST00000429277 FHOD3Q2V2M9 1422 aa15.81■□□□□ 0.12
LDB3-205ENST00000429277 STAC3Q96MF2 364 aa15.81■□□□□ 0.12
LDB3-205ENST00000429277 C1orf141Q5JVX7 400 aa15.8■□□□□ 0.12
LDB3-205ENST00000429277 GZF1Q9H116 711 aaPredicted RBP15.8■□□□□ 0.12
LDB3-205ENST00000429277 CLUAP1Q96AJ1 413 aa15.79■□□□□ 0.12
LDB3-205ENST00000429277 MARCH6O60337 910 aa15.79■□□□□ 0.12
LDB3-205ENST00000429277 ZKSCAN2Q63HK3 967 aa15.79■□□□□ 0.12
LDB3-205ENST00000429277 SKOR2Q2VWA4 1001 aaPredicted RBP15.78■□□□□ 0.12
LDB3-205ENST00000429277 TOMM22Q9NS69 142 aa15.78■□□□□ 0.12
LDB3-205ENST00000429277 CPLX2Q6PUV4 134 aaKnown RBP15.78■□□□□ 0.12
LDB3-205ENST00000429277 CCDC146Q8IYE0 955 aa15.78■□□□□ 0.12
LDB3-205ENST00000429277 RUFY2Q8WXA3 655 aa15.77■□□□□ 0.12
LDB3-205ENST00000429277 NEXNQ0ZGT2 675 aa15.77■□□□□ 0.12
LDB3-205ENST00000429277 TRAK1Q9UPV9 953 aa15.77■□□□□ 0.12
LDB3-205ENST00000429277 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.77■□□□□ 0.11
LDB3-205ENST00000429277 AKAP17AQ02040 695 aaKnown RBP15.76■□□□□ 0.11
LDB3-205ENST00000429277 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
LDB3-205ENST00000429277 ROCK1Q13464 1354 aa15.76■□□□□ 0.11
LDB3-205ENST00000429277 A0A0U1RQG5 324 aaPredicted RBP15.76■□□□□ 0.11
LDB3-205ENST00000429277 H3BQV1 296 aa15.75■□□□□ 0.11
LDB3-205ENST00000429277 TEFQ10587 303 aa15.75■□□□□ 0.11
LDB3-205ENST00000429277 TSR1Q2NL82 804 aaKnown RBP15.75■□□□□ 0.11
LDB3-205ENST00000429277 IFFO2Q5TF58 517 aa15.75■□□□□ 0.11
LDB3-205ENST00000429277 SYNE3Q6ZMZ3 975 aa15.75■□□□□ 0.11
LDB3-205ENST00000429277 FAM184AQ8NB25 1140 aa15.75■□□□□ 0.11
LDB3-205ENST00000429277 TPM2P07951 284 aa15.75■□□□□ 0.11
LDB3-205ENST00000429277 AMOTL1Q8IY63 956 aa15.75■□□□□ 0.11
LDB3-205ENST00000429277 FAM161AQ3B820 660 aa15.74■□□□□ 0.11
LDB3-205ENST00000429277 PANK3Q9H999 370 aa15.74■□□□□ 0.11
LDB3-205ENST00000429277 TPM1P09493 284 aa15.74■□□□□ 0.11
LDB3-205ENST00000429277 LTV1Q96GA3 475 aaPredicted RBP15.74■□□□□ 0.11
LDB3-205ENST00000429277 ST20-MTHFSA0A0A6YYL1 179 aa15.73■□□□□ 0.11
LDB3-205ENST00000429277 REC8O95072 547 aa15.73■□□□□ 0.11
LDB3-205ENST00000429277 API5Q9BZZ5 524 aaKnown RBP15.73■□□□□ 0.11
LDB3-205ENST00000429277 TTC5Q8N0Z6 440 aa15.72■□□□□ 0.11
LDB3-205ENST00000429277 NOL10Q9BSC4 688 aaKnown RBP15.72■□□□□ 0.11
LDB3-205ENST00000429277 DDX19BQ9UMR2 479 aa15.72■□□□□ 0.11
LDB3-205ENST00000429277 PTPRGP23470 1445 aa15.72■□□□□ 0.11
LDB3-205ENST00000429277 TPD52L1Q16890 204 aaPredicted RBP15.72■□□□□ 0.11
LDB3-205ENST00000429277 AAMPQ13685 434 aa15.71■□□□□ 0.11
LDB3-205ENST00000429277 DIAPH3Q9NSV4 1193 aa15.71■□□□□ 0.11
LDB3-205ENST00000429277 DDX58O95786 925 aaKnown RBP15.71■□□□□ 0.11
LDB3-205ENST00000429277 GOLGA6L19H0YKK7 550 aa15.71■□□□□ 0.1
LDB3-205ENST00000429277 ZKSCAN1P17029 563 aaPredicted RBP15.71■□□□□ 0.1
LDB3-205ENST00000429277 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.71■□□□□ 0.1
LDB3-205ENST00000429277 ZBED9Q6R2W3 1325 aa15.71■□□□□ 0.1
LDB3-205ENST00000429277 CCDC47Q96A33 483 aaKnown RBP15.7■□□□□ 0.1
LDB3-205ENST00000429277 ANKRD45Q5TZF3 282 aa15.69■□□□□ 0.1
LDB3-205ENST00000429277 RILPL2Q969X0 211 aa15.69■□□□□ 0.1
LDB3-205ENST00000429277 NOL8Q76FK4 1167 aaKnown RBP15.68■□□□□ 0.1
LDB3-205ENST00000429277 USP47Q96K76 1375 aa15.68■□□□□ 0.1
LDB3-205ENST00000429277 BECN2A8MW95 431 aa15.68■□□□□ 0.1
LDB3-205ENST00000429277 VPS53Q5VIR6 699 aa15.68■□□□□ 0.1
LDB3-205ENST00000429277 CCDC70Q6NSX1 233 aa15.68■□□□□ 0.1
LDB3-205ENST00000429277 EVA1CP58658 441 aa15.68■□□□□ 0.1
LDB3-205ENST00000429277 HSP90AB4PQ58FF6 505 aa15.68■□□□□ 0.1
LDB3-205ENST00000429277 NUTM2DQ5VT03 806 aaPredicted RBP15.68■□□□□ 0.1
LDB3-205ENST00000429277 TNNT3P45378 269 aaPredicted RBP15.68■□□□□ 0.1
LDB3-205ENST00000429277 TRIM29Q14134 588 aa15.68■□□□□ 0.1
LDB3-205ENST00000429277 RNF20Q5VTR2 975 aa15.67■□□□□ 0.1
LDB3-205ENST00000429277 PRKRIP1Q9H875 184 aaPredicted RBP15.67■□□□□ 0.1
LDB3-205ENST00000429277 DIAPH1O60610 1272 aaKnown RBP15.67■□□□□ 0.1
LDB3-205ENST00000429277 RRP1P56182 461 aaKnown RBP15.67■□□□□ 0.1
LDB3-205ENST00000429277 C9orf78Q9NZ63 289 aaPredicted RBP15.67■□□□□ 0.1
LDB3-205ENST00000429277 CREBRFQ8IUR6 639 aa15.66■□□□□ 0.1
LDB3-205ENST00000429277 WWC1Q8IX03 1113 aa15.66■□□□□ 0.1
LDB3-205ENST00000429277 HOOK1Q9UJC3 728 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms