RNA–Protein interactions for RNA: ENST00000428744.1

KIF3A-204, Transcript of kinesin family member 3A, humanhuman

TSL 5

Gene KIF3A, Length 658 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-204ENST00000428744 COL9A1P20849 921 aa9.1□□□□□ -0.95
KIF3A-204ENST00000428744 EPAS1Q99814 870 aa9.1□□□□□ -0.95
KIF3A-204ENST00000428744 PPP1R3GB7ZBB8 358 aa9.09□□□□□ -0.95
KIF3A-204ENST00000428744 E2F4Q16254 413 aa9.09□□□□□ -0.95
KIF3A-204ENST00000428744 KCTD12Q96CX2 325 aaKnown RBP9.09□□□□□ -0.95
KIF3A-204ENST00000428744 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
KIF3A-204ENST00000428744 ARIH1Q9Y4X5 557 aaPredicted RBP9.09□□□□□ -0.95
KIF3A-204ENST00000428744 PDIA6Q15084 440 aa9.08□□□□□ -0.96
KIF3A-204ENST00000428744 PLA2G2EQ9NZK7 142 aa9.08□□□□□ -0.96
KIF3A-204ENST00000428744 C6orf132Q5T0Z8 1188 aa9.07□□□□□ -0.96
KIF3A-204ENST00000428744 DDX12PQ92771 950 aa9.06□□□□□ -0.96
KIF3A-204ENST00000428744 WDR70Q9NW82 654 aa9.06□□□□□ -0.96
KIF3A-204ENST00000428744 SPDYE16A6NNV3 312 aaPredicted RBP9.05□□□□□ -0.96
KIF3A-204ENST00000428744 PROX2Q3B8N5 592 aa9.05□□□□□ -0.96
KIF3A-204ENST00000428744 RABGEF1Q9UJ41 708 aa9.05□□□□□ -0.96
KIF3A-204ENST00000428744 MRPL50Q8N5N7 158 aaKnown RBP9.04□□□□□ -0.96
KIF3A-204ENST00000428744 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
KIF3A-204ENST00000428744 THSD4Q6ZMP0 1018 aa9.02□□□□□ -0.97
KIF3A-204ENST00000428744 NBPF3Q9H094 633 aa9.02□□□□□ -0.97
KIF3A-204ENST00000428744 KDM2AQ9Y2K7 1162 aa9.02□□□□□ -0.97
KIF3A-204ENST00000428744 P3H3Q8IVL6 736 aa9.01□□□□□ -0.97
KIF3A-204ENST00000428744 RBM33Q96EV2 1170 aaKnown RBP9.01□□□□□ -0.97
KIF3A-204ENST00000428744 EN1Q05925 392 aaPredicted RBP9□□□□□ -0.97
KIF3A-204ENST00000428744 WNT2BQ93097 391 aa9□□□□□ -0.97
KIF3A-204ENST00000428744 KIAA1468Q9P260 1216 aa9□□□□□ -0.97
KIF3A-204ENST00000428744 PRIM1P49642 420 aaKnown RBP8.99□□□□□ -0.97
KIF3A-204ENST00000428744 PTPN5P54829 565 aa8.99□□□□□ -0.97
KIF3A-204ENST00000428744 NBR1Q14596 966 aa8.99□□□□□ -0.97
KIF3A-204ENST00000428744 GOLGA8CPA6NN73 597 aa8.98□□□□□ -0.97
KIF3A-204ENST00000428744 TSR1Q2NL82 804 aaKnown RBP8.98□□□□□ -0.97
KIF3A-204ENST00000428744 TRIM6-TRIM34B2RNG4 842 aa8.97□□□□□ -0.97
KIF3A-204ENST00000428744 LAPTM4BQ86VI4 370 aa8.97□□□□□ -0.97
KIF3A-204ENST00000428744 BCANQ96GW7 911 aa8.97□□□□□ -0.97
KIF3A-204ENST00000428744 MAP3K7O43318 606 aa8.95□□□□□ -0.98
KIF3A-204ENST00000428744 OSBPP22059 807 aa8.95□□□□□ -0.98
KIF3A-204ENST00000428744 GRXCR2A6NFK2 248 aa8.94□□□□□ -0.98
KIF3A-204ENST00000428744 ARHGEF1Q92888 912 aaKnown RBP8.94□□□□□ -0.98
KIF3A-204ENST00000428744 TSKSQ9UJT2 592 aa8.94□□□□□ -0.98
KIF3A-204ENST00000428744 ZFRQ96KR1 1074 aaKnown RBP8.93□□□□□ -0.98
KIF3A-204ENST00000428744 RGS20O76081 388 aa8.92□□□□□ -0.98
KIF3A-204ENST00000428744 SOWAHBA6NEL2 793 aa8.91□□□□□ -0.98
KIF3A-204ENST00000428744 IFFO2Q5TF58 517 aa8.91□□□□□ -0.98
KIF3A-204ENST00000428744 ANKK1Q8NFD2 765 aa8.91□□□□□ -0.98
KIF3A-204ENST00000428744 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
KIF3A-204ENST00000428744 SEPT9Q9UHD8 586 aaPredicted RBP8.91□□□□□ -0.98
KIF3A-204ENST00000428744 FAM98CQ17RN3 349 aaKnown RBP8.9□□□□□ -0.98
KIF3A-204ENST00000428744 CDCA7LQ96GN5 454 aa8.9□□□□□ -0.98
KIF3A-204ENST00000428744 BCAMP50895 628 aa8.89□□□□□ -0.99
KIF3A-204ENST00000428744 PRSS12P56730 875 aa8.89□□□□□ -0.99
KIF3A-204ENST00000428744 PACS2Q86VP3 889 aa8.89□□□□□ -0.99
KIF3A-204ENST00000428744 CERKQ8TCT0 537 aa8.89□□□□□ -0.99
KIF3A-204ENST00000428744 KCNV2Q8TDN2 545 aa8.88□□□□□ -0.99
KIF3A-204ENST00000428744 C3orf80F5H4A9 247 aa8.87□□□□□ -0.99
KIF3A-204ENST00000428744 CDHR5Q9HBB8 845 aa8.87□□□□□ -0.99
KIF3A-204ENST00000428744 NPDC1Q9NQX5 325 aaPredicted RBP8.87□□□□□ -0.99
KIF3A-204ENST00000428744 WBP1LQ9NX94 342 aa8.85□□□□□ -0.99
KIF3A-204ENST00000428744 MLLT3P42568 568 aaPredicted RBP8.84□□□□□ -0.99
KIF3A-204ENST00000428744 TTC13Q8NBP0 860 aa8.84□□□□□ -0.99
KIF3A-204ENST00000428744 SMAPO00193 183 aa8.83□□□□□ -1
KIF3A-204ENST00000428744 NYAP1Q6ZVC0 841 aa8.83□□□□□ -1
KIF3A-204ENST00000428744 TATDN2Q93075 761 aa8.83□□□□□ -1
KIF3A-204ENST00000428744 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.83□□□□□ -1
KIF3A-204ENST00000428744 RBM27Q9P2N5 1060 aaKnown RBP8.83□□□□□ -1
KIF3A-204ENST00000428744 ITGBL1O95965 494 aaPredicted RBP8.82□□□□□ -1
KIF3A-204ENST00000428744 LRCH3Q96II8 777 aa8.81□□□□□ -1
KIF3A-204ENST00000428744 TSR3Q9UJK0 312 aaKnown RBP8.81□□□□□ -1
KIF3A-204ENST00000428744 IRX2Q9BZI1 471 aaPredicted RBP8.8□□□□□ -1
KIF3A-204ENST00000428744 PNMA3Q9UL41 463 aa8.8□□□□□ -1
KIF3A-204ENST00000428744 HPS5Q9UPZ3 1129 aa8.79□□□□□ -1
KIF3A-204ENST00000428744 A0A0G2JS52 829 aa8.78□□□□□ -1
KIF3A-204ENST00000428744 NBPF26B4DH59 902 aa8.78□□□□□ -1
KIF3A-204ENST00000428744 NUDT18Q6ZVK8 323 aa8.78□□□□□ -1
KIF3A-204ENST00000428744 SAMD7Q7Z3H4 446 aa8.78□□□□□ -1
KIF3A-204ENST00000428744 PADI6Q6TGC4 694 aa8.77□□□□□ -1.01
KIF3A-204ENST00000428744 PPP4CP60510 307 aa8.75□□□□□ -1.01
KIF3A-204ENST00000428744 SEMA3EO15041 775 aa8.74□□□□□ -1.01
KIF3A-204ENST00000428744 PTGDRQ13258 359 aa8.74□□□□□ -1.01
KIF3A-204ENST00000428744 SMYD5Q6GMV2 418 aa8.74□□□□□ -1.01
KIF3A-204ENST00000428744 EYA1Q99502 592 aa8.74□□□□□ -1.01
KIF3A-204ENST00000428744 KCNC4Q03721 635 aa8.73□□□□□ -1.01
KIF3A-204ENST00000428744 TESPA1A2RU30 521 aaPredicted RBP8.72□□□□□ -1.01
KIF3A-204ENST00000428744 TULP1O00294 542 aaPredicted RBP8.71□□□□□ -1.02
KIF3A-204ENST00000428744 TJAP1Q5JTD0 557 aa8.7□□□□□ -1.02
KIF3A-204ENST00000428744 PRKCSHP14314 528 aaPredicted RBP8.69□□□□□ -1.02
KIF3A-204ENST00000428744 HDGFP51858 240 aaKnown RBP8.69□□□□□ -1.02
KIF3A-204ENST00000428744 SWT1Q5T5J6 900 aaKnown RBP8.69□□□□□ -1.02
KIF3A-204ENST00000428744 NUTM2FA1L443 756 aa8.66□□□□□ -1.02
KIF3A-204ENST00000428744 APLP1P51693 650 aa8.66□□□□□ -1.02
KIF3A-204ENST00000428744 TPRNQ4KMQ1 711 aa8.66□□□□□ -1.02
KIF3A-204ENST00000428744 ADGRG1Q9Y653 693 aa8.66□□□□□ -1.02
KIF3A-204ENST00000428744 SLF2Q8IX21 1173 aa8.64□□□□□ -1.03
KIF3A-204ENST00000428744 MTRQ99707 1265 aa8.64□□□□□ -1.03
KIF3A-204ENST00000428744 FCHSD2O94868 740 aa8.63□□□□□ -1.03
KIF3A-204ENST00000428744 IL21Q9HBE4 155 aa8.63□□□□□ -1.03
KIF3A-204ENST00000428744 RNF40O75150 1001 aa8.62□□□□□ -1.03
KIF3A-204ENST00000428744 FAM161AQ3B820 660 aa8.62□□□□□ -1.03
KIF3A-204ENST00000428744 RBM26Q5T8P6 1007 aaKnown RBP8.62□□□□□ -1.03
KIF3A-204ENST00000428744 RBM46Q8TBY0 533 aaKnown RBP8.62□□□□□ -1.03
KIF3A-204ENST00000428744 ZNF516Q92618 1163 aa8.62□□□□□ -1.03
KIF3A-204ENST00000428744 DNAJB2P25686 324 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms