RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 KDM5DQ9BY66 1539 aa33.22■■■□□ 2.91
PCGF3-204ENST00000427463 TSPY4P0CV99 314 aa33.2■■■□□ 2.91
PCGF3-204ENST00000427463 TSPY10P0CW01 314 aa33.2■■■□□ 2.91
PCGF3-204ENST00000427463 RNF17Q9BXT8 1623 aaKnown RBP33.15■■■□□ 2.9
PCGF3-204ENST00000427463 PLA2R1Q13018 1463 aa33.13■■■□□ 2.89
PCGF3-204ENST00000427463 PZPP20742 1482 aa33.12■■■□□ 2.89
PCGF3-204ENST00000427463 EIF2AK4Q9P2K8 1649 aaKnown RBP33.12■■■□□ 2.89
PCGF3-204ENST00000427463 CROCC2H7BZ55 1655 aa33.1■■■□□ 2.89
PCGF3-204ENST00000427463 A2ML1A8K2U0 1454 aa33.1■■■□□ 2.89
PCGF3-204ENST00000427463 DNMT1P26358 1616 aaKnown RBP33.1■■■□□ 2.89
PCGF3-204ENST00000427463 LTBP4Q8N2S1 1624 aa33.1■■■□□ 2.89
PCGF3-204ENST00000427463 TCOF1Q13428 1488 aaKnown RBP33.08■■■□□ 2.89
PCGF3-204ENST00000427463 PTPN23Q9H3S7 1636 aa33.08■■■□□ 2.89
PCGF3-204ENST00000427463 WASHC2CQ9Y4E1 1318 aa33.07■■■□□ 2.88
PCGF3-204ENST00000427463 ZC3H13Q5T200 1668 aaKnown RBP33.07■■■□□ 2.88
PCGF3-204ENST00000427463 APLP2Q06481 763 aa33.06■■■□□ 2.88
PCGF3-204ENST00000427463 NCKAP5LQ9HCH0 1330 aa33.05■■■□□ 2.88
PCGF3-204ENST00000427463 TNRQ92752 1358 aa33.05■■■□□ 2.88
PCGF3-204ENST00000427463 MROH1Q8NDA8 1641 aa33.04■■■□□ 2.88
PCGF3-204ENST00000427463 FBXO31Q5XUX0 539 aaPredicted RBP33.04■■■□□ 2.88
PCGF3-204ENST00000427463 ABCC3O15438 1527 aa33.02■■■□□ 2.88
PCGF3-204ENST00000427463 SHANK2Q9UPX8 1470 aa33.01■■■□□ 2.88
PCGF3-204ENST00000427463 DUOX2Q9NRD8 1548 aa33.01■■■□□ 2.87
PCGF3-204ENST00000427463 PKD2Q13563 968 aa33■■■□□ 2.87
PCGF3-204ENST00000427463 POLR1AO95602 1720 aaPredicted RBP32.99■■■□□ 2.87
PCGF3-204ENST00000427463 ABCC5O15440 1437 aa32.98■■■□□ 2.87
PCGF3-204ENST00000427463 CEP152O94986 1710 aa32.98■■■□□ 2.87
PCGF3-204ENST00000427463 FGD6Q6ZV73 1430 aa32.97■■■□□ 2.87
PCGF3-204ENST00000427463 IQSEC2Q5JU85 1478 aa32.93■■■□□ 2.86
PCGF3-204ENST00000427463 NLRP1Q9C000 1473 aa32.93■■■□□ 2.86
PCGF3-204ENST00000427463 DAPK1P53355 1430 aa32.93■■■□□ 2.86
PCGF3-204ENST00000427463 KIF15Q9NS87 1388 aa32.92■■■□□ 2.86
PCGF3-204ENST00000427463 SPATA31D1Q6ZQQ2 1576 aa32.92■■■□□ 2.86
PCGF3-204ENST00000427463 NEURL4Q96JN8 1562 aa32.91■■■□□ 2.86
PCGF3-204ENST00000427463 CFAP65Q6ZU64 1925 aaKnown RBP32.9■■■□□ 2.86
PCGF3-204ENST00000427463 ZNF335Q9H4Z2 1342 aaPredicted RBP32.9■■■□□ 2.86
PCGF3-204ENST00000427463 PRDM15P57071 1507 aaPredicted RBP32.89■■■□□ 2.86
PCGF3-204ENST00000427463 ERBINQ96RT1 1412 aa32.88■■■□□ 2.85
PCGF3-204ENST00000427463 UGGT1Q9NYU2 1555 aa32.87■■■□□ 2.85
PCGF3-204ENST00000427463 DEPDC5O75140 1603 aa32.86■■■□□ 2.85
PCGF3-204ENST00000427463 ERVK-7P63135 1459 aa32.86■■■□□ 2.85
PCGF3-204ENST00000427463 RRP7BPQ9NSQ0 103 aa32.83■■■□□ 2.85
PCGF3-204ENST00000427463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.82■■■□□ 2.846e-7■■■■■ 74.7
PCGF3-204ENST00000427463 THEMISQ8N1K5 641 aaPredicted RBP32.78■■■□□ 2.84
PCGF3-204ENST00000427463 ANKRD30AQ9BXX3 1397 aa32.75■■■□□ 2.83
PCGF3-204ENST00000427463 UBR1Q8IWV7 1749 aa32.75■■■□□ 2.83
PCGF3-204ENST00000427463 ARHGAP31Q2M1Z3 1444 aa32.75■■■□□ 2.83
PCGF3-204ENST00000427463 MED14O60244 1454 aa32.74■■■□□ 2.83
PCGF3-204ENST00000427463 ANKLE2Q86XL3 938 aa32.73■■■□□ 2.83
PCGF3-204ENST00000427463 CHIC2Q9UKJ5 165 aa32.72■■■□□ 2.83
PCGF3-204ENST00000427463 IQGAP1P46940 1657 aa32.72■■■□□ 2.83
PCGF3-204ENST00000427463 ADGRL2O95490 1459 aa32.71■■■□□ 2.83
PCGF3-204ENST00000427463 VWDEQ8N2E2 1590 aa32.7■■■□□ 2.82
PCGF3-204ENST00000427463 NPHP4O75161 1426 aaPredicted RBP32.68■■■□□ 2.82
PCGF3-204ENST00000427463 CPS1P31327 1500 aa32.67■■■□□ 2.82
PCGF3-204ENST00000427463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.66■■■□□ 2.822e-7■■□□□ 11.4
PCGF3-204ENST00000427463 LMTK2Q8IWU2 1503 aa32.66■■■□□ 2.82
PCGF3-204ENST00000427463 KANK1Q14678 1352 aa32.65■■■□□ 2.82
PCGF3-204ENST00000427463 FAM50AQ14320 339 aaKnown RBP32.63■■■□□ 2.81
PCGF3-204ENST00000427463 PIK3C2BO00750 1634 aa32.61■■■□□ 2.81
PCGF3-204ENST00000427463 UBAP1LF5GYI3 381 aa32.59■■■□□ 2.81
PCGF3-204ENST00000427463 EFCAB6Q5THR3 1501 aa32.58■■■□□ 2.81
PCGF3-204ENST00000427463 SLIT1O75093 1534 aa32.57■■■□□ 2.8
PCGF3-204ENST00000427463 ARHGAP23Q9P227 1491 aa32.57■■■□□ 2.8
PCGF3-204ENST00000427463 STRCP1A6NGW2 1772 aa32.57■■■□□ 2.8
PCGF3-204ENST00000427463 KDM5AP29375 1690 aaKnown RBP32.56■■■□□ 2.8
PCGF3-204ENST00000427463 SCAF11Q99590 1463 aaKnown RBP32.55■■■□□ 2.8
PCGF3-204ENST00000427463 SYNMO15061 1565 aa32.54■■■□□ 2.8
PCGF3-204ENST00000427463 ANKRD50Q9ULJ7 1429 aa32.53■■■□□ 2.8
PCGF3-204ENST00000427463 NOS1P29475 1434 aa32.48■■■□□ 2.79
PCGF3-204ENST00000427463 LTKP29376 864 aa32.46■■■□□ 2.79
PCGF3-204ENST00000427463 TET3O43151 1660 aa32.46■■■□□ 2.79
PCGF3-204ENST00000427463 UNC13BO14795 1591 aa32.45■■■□□ 2.79
PCGF3-204ENST00000427463 DISP3Q9P2K9 1392 aa32.44■■■□□ 2.78
PCGF3-204ENST00000427463 TMEM2Q9UHN6 1383 aa32.44■■■□□ 2.78
PCGF3-204ENST00000427463 TXNDC2Q86VQ3 553 aa32.43■■■□□ 2.78
PCGF3-204ENST00000427463 GCC2Q8IWJ2 1684 aa32.43■■■□□ 2.78
PCGF3-204ENST00000427463 RPRD2Q5VT52 1461 aaKnown RBP32.42■■■□□ 2.78
PCGF3-204ENST00000427463 IDI1Q13907 227 aa32.42■■■□□ 2.78
PCGF3-204ENST00000427463 ADGRB3O60242 1522 aa32.41■■■□□ 2.78
PCGF3-204ENST00000427463 LRRC7Q96NW7 1537 aa32.41■■■□□ 2.78
PCGF3-204ENST00000427463 ALKQ9UM73 1620 aa32.4■■■□□ 2.78
PCGF3-204ENST00000427463 ROCK1Q13464 1354 aa32.39■■■□□ 2.78
PCGF3-204ENST00000427463 STAG3Q9UJ98 1225 aa32.38■■■□□ 2.77
PCGF3-204ENST00000427463 EID1Q9Y6B2 187 aa32.38■■■□□ 2.77
PCGF3-204ENST00000427463 TOM1O60784 492 aa32.37■■■□□ 2.77
PCGF3-204ENST00000427463 MYO5BQ9ULV0 1848 aa32.36■■■□□ 2.77
PCGF3-204ENST00000427463 XIRP1Q702N8 1843 aaKnown RBP32.33■■■□□ 2.77
PCGF3-204ENST00000427463 PIP4K2BP78356 416 aa32.33■■■□□ 2.77
PCGF3-204ENST00000427463 SCAF1Q9H7N4 1312 aaKnown RBP32.32■■■□□ 2.76
PCGF3-204ENST00000427463 E9PCH4 1651 aa32.32■■■□□ 2.76
PCGF3-204ENST00000427463 IQGAP3Q86VI3 1631 aa32.32■■■□□ 2.76
PCGF3-204ENST00000427463 SLC52A1Q9NWF4 448 aa32.31■■■□□ 2.76
PCGF3-204ENST00000427463 PPARGC1BQ86YN6 1023 aaKnown RBP32.3■■■□□ 2.76
PCGF3-204ENST00000427463 HSPA1LP34931 641 aa32.26■■■□□ 2.75
PCGF3-204ENST00000427463 TMEM131LA2VDJ0 1609 aa32.26■■■□□ 2.75
PCGF3-204ENST00000427463 ILDR2Q71H61 639 aa32.24■■■□□ 2.75
PCGF3-204ENST00000427463 ITGAEP38570 1179 aa32.23■■■□□ 2.75
PCGF3-204ENST00000427463 ZFYVE9O95405 1425 aa32.2■■■□□ 2.75
PCGF3-204ENST00000427463 NWD1Q149M9 1564 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms