RNA–Protein interactions for RNA: ENST00000427314.6

RACGAP1-202, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,229 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-202ENST00000427314 LMTK2Q8IWU2 1503 aa6.89□□□□□ -1.31
RACGAP1-202ENST00000427314 FANCAO15360 1455 aa6.89□□□□□ -1.31
RACGAP1-202ENST00000427314 SHANK2Q9UPX8 1470 aa6.89□□□□□ -1.31
RACGAP1-202ENST00000427314 MADDQ8WXG6 1647 aa6.88□□□□□ -1.31
RACGAP1-202ENST00000427314 ARHGAP35Q9NRY4 1499 aa6.88□□□□□ -1.31
RACGAP1-202ENST00000427314 PLA2R1Q13018 1463 aa6.88□□□□□ -1.31
RACGAP1-202ENST00000427314 UBE2Q2Q8WVN8 375 aa6.88□□□□□ -1.31
RACGAP1-202ENST00000427314 ZNF219Q9P2Y4 722 aaPredicted RBP6.88□□□□□ -1.31
RACGAP1-202ENST00000427314 SAMD9LQ8IVG5 1584 aa6.87□□□□□ -1.31
RACGAP1-202ENST00000427314 LAMC1P11047 1609 aa6.87□□□□□ -1.31
RACGAP1-202ENST00000427314 MKRN4PQ13434 485 aaPredicted RBP6.87□□□□□ -1.31
RACGAP1-202ENST00000427314 SUPT6HQ7KZ85 1726 aaKnown RBP6.87□□□□□ -1.31
RACGAP1-202ENST00000427314 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.87□□□□□ -1.31
RACGAP1-202ENST00000427314 SETD1BQ9UPS6 1966 aaKnown RBP6.87□□□□□ -1.31
RACGAP1-202ENST00000427314 ZNF518AQ6AHZ1 1483 aa6.86□□□□□ -1.31
RACGAP1-202ENST00000427314 MYO3AQ8NEV4 1616 aa6.86□□□□□ -1.31
RACGAP1-202ENST00000427314 TIAM1Q13009 1591 aa6.86□□□□□ -1.31
RACGAP1-202ENST00000427314 CHMP4AQ9BY43 222 aa6.86□□□□□ -1.31
RACGAP1-202ENST00000427314 MROH1Q8NDA8 1641 aa6.85□□□□□ -1.31
RACGAP1-202ENST00000427314 TROQ12816 1431 aaPredicted RBP6.85□□□□□ -1.31
RACGAP1-202ENST00000427314 C9orf84Q5VXU9 1444 aa6.85□□□□□ -1.31
RACGAP1-202ENST00000427314 CNTLNQ9NXG0 1405 aa6.85□□□□□ -1.31
RACGAP1-202ENST00000427314 GCC2Q8IWJ2 1684 aa6.85□□□□□ -1.31
RACGAP1-202ENST00000427314 CDK11AQ9UQ88 783 aaPredicted RBP6.85□□□□□ -1.31
RACGAP1-202ENST00000427314 RIMS1Q86UR5 1692 aaKnown RBP6.85□□□□□ -1.31
RACGAP1-202ENST00000427314 ECM2O94769 699 aaPredicted RBP6.84□□□□□ -1.31
RACGAP1-202ENST00000427314 PCGF6Q9BYE7 350 aa6.84□□□□□ -1.31
RACGAP1-202ENST00000427314 IQGAP3Q86VI3 1631 aa6.84□□□□□ -1.31
RACGAP1-202ENST00000427314 TCOF1Q13428 1488 aaKnown RBP6.84□□□□□ -1.31
RACGAP1-202ENST00000427314 PTPRTO14522 1441 aa6.84□□□□□ -1.31
RACGAP1-202ENST00000427314 CEP162Q5TB80 1403 aa6.84□□□□□ -1.31
RACGAP1-202ENST00000427314 PRDM15P57071 1507 aaPredicted RBP6.84□□□□□ -1.32
RACGAP1-202ENST00000427314 PRAG1Q86YV5 1406 aa6.83□□□□□ -1.32
RACGAP1-202ENST00000427314 SAMD1Q6SPF0 538 aaPredicted RBP6.83□□□□□ -1.32
RACGAP1-202ENST00000427314 CD109Q6YHK3 1445 aa6.83□□□□□ -1.32
RACGAP1-202ENST00000427314 CDK11BP21127 795 aaKnown RBP6.83□□□□□ -1.32
RACGAP1-202ENST00000427314 PPARGC1BQ86YN6 1023 aaKnown RBP6.83□□□□□ -1.32
RACGAP1-202ENST00000427314 PIK3C2BO00750 1634 aa6.83□□□□□ -1.32
RACGAP1-202ENST00000427314 RGL2O15211 777 aa6.82□□□□□ -1.32
RACGAP1-202ENST00000427314 NWD1Q149M9 1564 aa6.82□□□□□ -1.32
RACGAP1-202ENST00000427314 SPATA31D1Q6ZQQ2 1576 aa6.82□□□□□ -1.32
RACGAP1-202ENST00000427314 ATP10AO60312 1499 aa6.82□□□□□ -1.32
RACGAP1-202ENST00000427314 UNC13BO14795 1591 aa6.82□□□□□ -1.32
RACGAP1-202ENST00000427314 DENND4BO75064 1496 aaPredicted RBP6.82□□□□□ -1.32
RACGAP1-202ENST00000427314 AKNAQ7Z591 1439 aa6.81□□□□□ -1.32
RACGAP1-202ENST00000427314 MED14O60244 1454 aa6.8□□□□□ -1.32
RACGAP1-202ENST00000427314 UGGT1Q9NYU2 1555 aa6.8□□□□□ -1.32
RACGAP1-202ENST00000427314 PTPRMP28827 1452 aa6.8□□□□□ -1.32
RACGAP1-202ENST00000427314 DNMT1P26358 1616 aaKnown RBP6.79□□□□□ -1.32
RACGAP1-202ENST00000427314 HMGB1P09429 215 aaKnown RBP6.79□□□□□ -1.32
RACGAP1-202ENST00000427314 ADGRL2O95490 1459 aa6.79□□□□□ -1.32
RACGAP1-202ENST00000427314 CHGAP10645 457 aaKnown RBP6.78□□□□□ -1.32
RACGAP1-202ENST00000427314 LTBP4Q8N2S1 1624 aa6.78□□□□□ -1.32
RACGAP1-202ENST00000427314 ATP7AQ04656 1500 aa6.78□□□□□ -1.32
RACGAP1-202ENST00000427314 BRD2P25440 801 aaKnown RBP6.78□□□□□ -1.32
RACGAP1-202ENST00000427314 NBR1Q14596 966 aa6.78□□□□□ -1.32
RACGAP1-202ENST00000427314 CAMSAP1Q5T5Y3 1602 aa6.77□□□□□ -1.32
RACGAP1-202ENST00000427314 ARHGAP31Q2M1Z3 1444 aa6.77□□□□□ -1.33
RACGAP1-202ENST00000427314 DIP2AQ14689 1571 aa6.77□□□□□ -1.33
RACGAP1-202ENST00000427314 TRHP20396 242 aaPredicted RBP6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 CYB5RLQ6IPT4 315 aa6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 SPRYD3Q8NCJ5 442 aa6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 BBXQ8WY36 941 aaPredicted RBP6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 MIA2Q96PC5 1412 aa6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 UBR1Q8IWV7 1749 aa6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 MBD5Q9P267 1494 aa6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 EFCAB6Q5THR3 1501 aa6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 HSP90B1P14625 803 aaKnown RBP6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 HNRNPUL2Q1KMD3 747 aaKnown RBP6.76□□□□□ -1.33
RACGAP1-202ENST00000427314 CLIP1P30622 1438 aa6.75□□□□□ -1.33
RACGAP1-202ENST00000427314 PDE4CQ08493 712 aa6.75□□□□□ -1.33
RACGAP1-202ENST00000427314 SLIT1O75093 1534 aa6.75□□□□□ -1.33
RACGAP1-202ENST00000427314 IGSF3O75054 1194 aa6.75□□□□□ -1.33
RACGAP1-202ENST00000427314 XIRP1Q702N8 1843 aaKnown RBP6.75□□□□□ -1.33
RACGAP1-202ENST00000427314 CCDC9Q9Y3X0 531 aaKnown RBP6.74□□□□□ -1.33
RACGAP1-202ENST00000427314 CPS1P31327 1500 aa6.74□□□□□ -1.33
RACGAP1-202ENST00000427314 TET3O43151 1660 aa6.73□□□□□ -1.33
RACGAP1-202ENST00000427314 CLTCQ00610 1675 aaKnown RBP6.73□□□□□ -1.33
RACGAP1-202ENST00000427314 ALKQ9UM73 1620 aa6.73□□□□□ -1.33
RACGAP1-202ENST00000427314 GPATCH8Q9UKJ3 1502 aaKnown RBP6.73□□□□□ -1.33
RACGAP1-202ENST00000427314 TAF7LQ5H9L4 462 aa6.73□□□□□ -1.33
RACGAP1-202ENST00000427314 IFT172Q9UG01 1749 aa6.72□□□□□ -1.33
RACGAP1-202ENST00000427314 ARHGAP23Q9P227 1491 aa6.72□□□□□ -1.33
RACGAP1-202ENST00000427314 CEP170BQ9Y4F5 1589 aaPredicted RBP6.72□□□□□ -1.33
RACGAP1-202ENST00000427314 RPRD2Q5VT52 1461 aaKnown RBP6.72□□□□□ -1.33
RACGAP1-202ENST00000427314 KNDC1Q76NI1 1749 aa6.71□□□□□ -1.33
RACGAP1-202ENST00000427314 PZPP20742 1482 aa6.71□□□□□ -1.33
RACGAP1-202ENST00000427314 SETD1AO15047 1707 aaKnown RBP6.71□□□□□ -1.34
RACGAP1-202ENST00000427314 CIZ1Q9ULV3 898 aaPredicted RBP6.71□□□□□ -1.34
RACGAP1-202ENST00000427314 POLA2Q14181 598 aa6.71□□□□□ -1.34
RACGAP1-202ENST00000427314 NLRP1Q9C000 1473 aa6.7□□□□□ -1.34
RACGAP1-202ENST00000427314 DUOX2Q9NRD8 1548 aa6.7□□□□□ -1.34
RACGAP1-202ENST00000427314 KDM4FA0A1W2PPD8 638 aa6.7□□□□□ -1.34
RACGAP1-202ENST00000427314 NEFLP07196 543 aa6.7□□□□□ -1.34
RACGAP1-202ENST00000427314 ILDR1Q86SU0 546 aaPredicted RBP6.7□□□□□ -1.34
RACGAP1-202ENST00000427314 ERBINQ96RT1 1412 aa6.7□□□□□ -1.34
RACGAP1-202ENST00000427314 CEP152O94986 1710 aa6.69□□□□□ -1.34
RACGAP1-202ENST00000427314 CDK13Q14004 1512 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms