RNA–Protein interactions for RNA: ENST00000427238.1

SPRED2-204, Transcript of sprouty related EVH1 domain containing 2, humanhuman

TSL 3

Gene SPRED2, Length 467 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED2-204ENST00000427238 CAMK2BQ13554 666 aa9.72□□□□□ -0.85
SPRED2-204ENST00000427238 BBXQ8WY36 941 aaPredicted RBP9.71□□□□□ -0.86
SPRED2-204ENST00000427238 AMER1Q5JTC6 1135 aaPredicted RBP9.7□□□□□ -0.86
SPRED2-204ENST00000427238 ANKK1Q8NFD2 765 aa9.7□□□□□ -0.86
SPRED2-204ENST00000427238 EPAS1Q99814 870 aa9.7□□□□□ -0.86
SPRED2-204ENST00000427238 C6orf132Q5T0Z8 1188 aa9.69□□□□□ -0.86
SPRED2-204ENST00000427238 KIAA1468Q9P260 1216 aa9.68□□□□□ -0.86
SPRED2-204ENST00000427238 DDX12PQ92771 950 aa9.67□□□□□ -0.86
SPRED2-204ENST00000427238 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
SPRED2-204ENST00000427238 IFFO2Q5TF58 517 aa9.66□□□□□ -0.86
SPRED2-204ENST00000427238 LAPTM4BQ86VI4 370 aa9.66□□□□□ -0.86
SPRED2-204ENST00000427238 BCAMP50895 628 aa9.64□□□□□ -0.87
SPRED2-204ENST00000427238 SPRYD3Q8NCJ5 442 aa9.64□□□□□ -0.87
SPRED2-204ENST00000427238 ONECUT3O60422 494 aaPredicted RBP9.63□□□□□ -0.87
SPRED2-204ENST00000427238 ZFRQ96KR1 1074 aaKnown RBP9.63□□□□□ -0.87
SPRED2-204ENST00000427238 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.63□□□□□ -0.87
SPRED2-204ENST00000427238 SEPT9Q9UHD8 586 aaPredicted RBP9.62□□□□□ -0.87
SPRED2-204ENST00000427238 A0A0G2JS52 829 aa9.61□□□□□ -0.87
SPRED2-204ENST00000427238 SOWAHBA6NEL2 793 aa9.61□□□□□ -0.87
SPRED2-204ENST00000427238 TRIM6-TRIM34B2RNG4 842 aa9.61□□□□□ -0.87
SPRED2-204ENST00000427238 RGS20O76081 388 aa9.61□□□□□ -0.87
SPRED2-204ENST00000427238 NBR1Q14596 966 aa9.6□□□□□ -0.87
SPRED2-204ENST00000427238 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
SPRED2-204ENST00000427238 MAP3K7O43318 606 aa9.59□□□□□ -0.87
SPRED2-204ENST00000427238 PDIA6Q15084 440 aa9.58□□□□□ -0.88
SPRED2-204ENST00000427238 FAM98CQ17RN3 349 aaKnown RBP9.58□□□□□ -0.88
SPRED2-204ENST00000427238 SLC24A1O60721 1099 aa9.57□□□□□ -0.88
SPRED2-204ENST00000427238 EN1Q05925 392 aaPredicted RBP9.57□□□□□ -0.88
SPRED2-204ENST00000427238 NYAP1Q6ZVC0 841 aa9.57□□□□□ -0.88
SPRED2-204ENST00000427238 WBP1LQ9NX94 342 aa9.57□□□□□ -0.88
SPRED2-204ENST00000427238 SPDYE16A6NNV3 312 aaPredicted RBP9.56□□□□□ -0.88
SPRED2-204ENST00000427238 TSR1Q2NL82 804 aaKnown RBP9.56□□□□□ -0.88
SPRED2-204ENST00000427238 PACS2Q86VP3 889 aa9.56□□□□□ -0.88
SPRED2-204ENST00000427238 WDR70Q9NW82 654 aa9.56□□□□□ -0.88
SPRED2-204ENST00000427238 ITGBL1O95965 494 aaPredicted RBP9.55□□□□□ -0.88
SPRED2-204ENST00000427238 E2F4Q16254 413 aa9.55□□□□□ -0.88
SPRED2-204ENST00000427238 LRCH3Q96II8 777 aa9.55□□□□□ -0.88
SPRED2-204ENST00000427238 CFAP44Q96MT7 982 aa9.55□□□□□ -0.88
SPRED2-204ENST00000427238 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.55□□□□□ -0.88
SPRED2-204ENST00000427238 IRX2Q9BZI1 471 aaPredicted RBP9.54□□□□□ -0.88
SPRED2-204ENST00000427238 PAXIP1Q6ZW49 1069 aaPredicted RBP9.53□□□□□ -0.88
SPRED2-204ENST00000427238 TSR3Q9UJK0 312 aaKnown RBP9.53□□□□□ -0.88
SPRED2-204ENST00000427238 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.89
SPRED2-204ENST00000427238 TSKSQ9UJT2 592 aa9.52□□□□□ -0.89
SPRED2-204ENST00000427238 HPS5Q9UPZ3 1129 aa9.52□□□□□ -0.89
SPRED2-204ENST00000427238 KCNC4Q03721 635 aa9.51□□□□□ -0.89
SPRED2-204ENST00000427238 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
SPRED2-204ENST00000427238 PRSS12P56730 875 aa9.48□□□□□ -0.89
SPRED2-204ENST00000427238 PPP4CP60510 307 aa9.48□□□□□ -0.89
SPRED2-204ENST00000427238 CERKQ8TCT0 537 aa9.48□□□□□ -0.89
SPRED2-204ENST00000427238 SMAPO00193 183 aa9.47□□□□□ -0.89
SPRED2-204ENST00000427238 ARIH1Q9Y4X5 557 aaPredicted RBP9.47□□□□□ -0.89
SPRED2-204ENST00000427238 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
SPRED2-204ENST00000427238 SAMD7Q7Z3H4 446 aa9.44□□□□□ -0.9
SPRED2-204ENST00000427238 TATDN2Q93075 761 aa9.44□□□□□ -0.9
SPRED2-204ENST00000427238 PNMA3Q9UL41 463 aa9.44□□□□□ -0.9
SPRED2-204ENST00000427238 NBPF26B4DH59 902 aa9.43□□□□□ -0.9
SPRED2-204ENST00000427238 FAM198AQ9UFP1 575 aa9.43□□□□□ -0.9
SPRED2-204ENST00000427238 OSBPP22059 807 aa9.42□□□□□ -0.9
SPRED2-204ENST00000427238 HDGFP51858 240 aaKnown RBP9.41□□□□□ -0.9
SPRED2-204ENST00000427238 CDHR5Q9HBB8 845 aa9.41□□□□□ -0.9
SPRED2-204ENST00000427238 C3orf80F5H4A9 247 aa9.4□□□□□ -0.9
SPRED2-204ENST00000427238 RNF40O75150 1001 aa9.39□□□□□ -0.91
SPRED2-204ENST00000427238 NUDT18Q6ZVK8 323 aa9.39□□□□□ -0.91
SPRED2-204ENST00000427238 TJAP1Q5JTD0 557 aa9.36□□□□□ -0.91
SPRED2-204ENST00000427238 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
SPRED2-204ENST00000427238 Q6ZNB5 142 aa9.35□□□□□ -0.91
SPRED2-204ENST00000427238 MTRQ99707 1265 aa9.34□□□□□ -0.91
SPRED2-204ENST00000427238 IL21Q9HBE4 155 aa9.34□□□□□ -0.91
SPRED2-204ENST00000427238 PADI6Q6TGC4 694 aa9.33□□□□□ -0.92
SPRED2-204ENST00000427238 NPDC1Q9NQX5 325 aaPredicted RBP9.32□□□□□ -0.92
SPRED2-204ENST00000427238 TTC13Q8NBP0 860 aa9.31□□□□□ -0.92
SPRED2-204ENST00000427238 NECTIN2Q92692 538 aa9.31□□□□□ -0.92
SPRED2-204ENST00000427238 APLP1P51693 650 aa9.3□□□□□ -0.92
SPRED2-204ENST00000427238 SWT1Q5T5J6 900 aaKnown RBP9.3□□□□□ -0.92
SPRED2-204ENST00000427238 SLC4A3P48751 1232 aa9.29□□□□□ -0.92
SPRED2-204ENST00000427238 PPP1R18Q6NYC8 613 aa9.29□□□□□ -0.92
SPRED2-204ENST00000427238 SLF2Q8IX21 1173 aa9.29□□□□□ -0.92
SPRED2-204ENST00000427238 ZNF516Q92618 1163 aa9.29□□□□□ -0.92
SPRED2-204ENST00000427238 LAPTM4AQ15012 233 aa9.28□□□□□ -0.92
SPRED2-204ENST00000427238 ARHGEF1Q92888 912 aaKnown RBP9.28□□□□□ -0.92
SPRED2-204ENST00000427238 PRKD2Q9BZL6 878 aa9.28□□□□□ -0.92
SPRED2-204ENST00000427238 TSHZ2Q9NRE2 1034 aa9.28□□□□□ -0.92
SPRED2-204ENST00000427238 GFRA3O60609 400 aa9.27□□□□□ -0.93
SPRED2-204ENST00000427238 MLLT3P42568 568 aaPredicted RBP9.27□□□□□ -0.93
SPRED2-204ENST00000427238 COPS2P61201 443 aa9.26□□□□□ -0.93
SPRED2-204ENST00000427238 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.26□□□□□ -0.93
SPRED2-204ENST00000427238 EYA1Q99502 592 aa9.25□□□□□ -0.93
SPRED2-204ENST00000427238 NKX2-3Q8TAU0 364 aa9.24□□□□□ -0.93
SPRED2-204ENST00000427238 GGCXP38435 758 aa9.23□□□□□ -0.93
SPRED2-204ENST00000427238 KCNV2Q8TDN2 545 aa9.23□□□□□ -0.93
SPRED2-204ENST00000427238 V9GY48 417 aaPredicted RBP9.22□□□□□ -0.93
SPRED2-204ENST00000427238 PTGDRQ13258 359 aa9.21□□□□□ -0.94
SPRED2-204ENST00000427238 PRR14Q9BWN1 585 aa9.21□□□□□ -0.94
SPRED2-204ENST00000427238 RBM46Q8TBY0 533 aaKnown RBP9.2□□□□□ -0.94
SPRED2-204ENST00000427238 NUTM2FA1L443 756 aa9.19□□□□□ -0.94
SPRED2-204ENST00000427238 TRAF7Q6Q0C0 670 aa9.19□□□□□ -0.94
SPRED2-204ENST00000427238 PCDHB3Q9Y5E6 796 aa9.19□□□□□ -0.94
SPRED2-204ENST00000427238 NRG2O14511 850 aaPredicted RBP9.18□□□□□ -0.94
SPRED2-204ENST00000427238 ZPR1O75312 459 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms