RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 EPAS1Q99814 870 aa10.29□□□□□ -0.76
LINC02541-201ENST00000427157 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
LINC02541-201ENST00000427157 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
LINC02541-201ENST00000427157 HCSTQ9UBK5 93 aa10.28□□□□□ -0.76
LINC02541-201ENST00000427157 PROX2Q3B8N5 592 aa10.26□□□□□ -0.77
LINC02541-201ENST00000427157 SPDYE16A6NNV3 312 aaPredicted RBP10.25□□□□□ -0.77
LINC02541-201ENST00000427157 C6orf132Q5T0Z8 1188 aa10.25□□□□□ -0.77
LINC02541-201ENST00000427157 RBM33Q96EV2 1170 aaKnown RBP10.25□□□□□ -0.77
LINC02541-201ENST00000427157 TSHZ2Q9NRE2 1034 aa10.25□□□□□ -0.77
LINC02541-201ENST00000427157 ARIH1Q9Y4X5 557 aaPredicted RBP10.25□□□□□ -0.77
LINC02541-201ENST00000427157 NBR1Q14596 966 aa10.24□□□□□ -0.77
LINC02541-201ENST00000427157 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
LINC02541-201ENST00000427157 NBPF3Q9H094 633 aa10.23□□□□□ -0.77
LINC02541-201ENST00000427157 EN1Q05925 392 aaPredicted RBP10.21□□□□□ -0.77
LINC02541-201ENST00000427157 RABGEF1Q9UJ41 708 aa10.21□□□□□ -0.77
LINC02541-201ENST00000427157 GOLGA8CPA6NN73 597 aa10.19□□□□□ -0.78
LINC02541-201ENST00000427157 MAP3K7O43318 606 aa10.19□□□□□ -0.78
LINC02541-201ENST00000427157 TSR1Q2NL82 804 aaKnown RBP10.19□□□□□ -0.78
LINC02541-201ENST00000427157 THSD4Q6ZMP0 1018 aa10.19□□□□□ -0.78
LINC02541-201ENST00000427157 PTPN5P54829 565 aa10.18□□□□□ -0.78
LINC02541-201ENST00000427157 WNT2BQ93097 391 aa10.18□□□□□ -0.78
LINC02541-201ENST00000427157 PRIM1P49642 420 aaKnown RBP10.17□□□□□ -0.78
LINC02541-201ENST00000427157 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
LINC02541-201ENST00000427157 GRXCR2A6NFK2 248 aa10.16□□□□□ -0.78
LINC02541-201ENST00000427157 KIAA1468Q9P260 1216 aa10.16□□□□□ -0.78
LINC02541-201ENST00000427157 TRIM6-TRIM34B2RNG4 842 aa10.15□□□□□ -0.78
LINC02541-201ENST00000427157 ONECUT3O60422 494 aaPredicted RBP10.13□□□□□ -0.79
LINC02541-201ENST00000427157 LAPTM4BQ86VI4 370 aa10.13□□□□□ -0.79
LINC02541-201ENST00000427157 KCNV2Q8TDN2 545 aa10.13□□□□□ -0.79
LINC02541-201ENST00000427157 SEPT9Q9UHD8 586 aaPredicted RBP10.13□□□□□ -0.79
LINC02541-201ENST00000427157 OSBPP22059 807 aa10.12□□□□□ -0.79
LINC02541-201ENST00000427157 ANKK1Q8NFD2 765 aa10.11□□□□□ -0.79
LINC02541-201ENST00000427157 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
LINC02541-201ENST00000427157 ZFRQ96KR1 1074 aaKnown RBP10.09□□□□□ -0.79
LINC02541-201ENST00000427157 CDHR5Q9HBB8 845 aa10.09□□□□□ -0.79
LINC02541-201ENST00000427157 BCAMP50895 628 aa10.08□□□□□ -0.8
LINC02541-201ENST00000427157 ARHGEF1Q92888 912 aaKnown RBP10.08□□□□□ -0.8
LINC02541-201ENST00000427157 PLCB2Q00722 1185 aa10.07□□□□□ -0.8
LINC02541-201ENST00000427157 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
LINC02541-201ENST00000427157 CDCA7LQ96GN5 454 aa10.07□□□□□ -0.8
LINC02541-201ENST00000427157 SOWAHBA6NEL2 793 aa10.06□□□□□ -0.8
LINC02541-201ENST00000427157 PRSS12P56730 875 aa10.06□□□□□ -0.8
LINC02541-201ENST00000427157 CERKQ8TCT0 537 aa10.06□□□□□ -0.8
LINC02541-201ENST00000427157 FAM198AQ9UFP1 575 aa10.06□□□□□ -0.8
LINC02541-201ENST00000427157 PACS2Q86VP3 889 aa10.05□□□□□ -0.8
LINC02541-201ENST00000427157 MLLT3P42568 568 aaPredicted RBP10.04□□□□□ -0.8
LINC02541-201ENST00000427157 C3orf80F5H4A9 247 aa10.02□□□□□ -0.81
LINC02541-201ENST00000427157 SMAPO00193 183 aa10.02□□□□□ -0.81
LINC02541-201ENST00000427157 P3H3Q8IVL6 736 aa10.01□□□□□ -0.81
LINC02541-201ENST00000427157 LRCH3Q96II8 777 aa10□□□□□ -0.81
LINC02541-201ENST00000427157 WBP1LQ9NX94 342 aa10□□□□□ -0.81
LINC02541-201ENST00000427157 CDKN2AIPQ9NXV6 580 aaPredicted RBP10□□□□□ -0.81
LINC02541-201ENST00000427157 RBM27Q9P2N5 1060 aaKnown RBP10□□□□□ -0.81
LINC02541-201ENST00000427157 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
LINC02541-201ENST00000427157 NPDC1Q9NQX5 325 aaPredicted RBP9.99□□□□□ -0.81
LINC02541-201ENST00000427157 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
LINC02541-201ENST00000427157 TATDN2Q93075 761 aa9.98□□□□□ -0.81
LINC02541-201ENST00000427157 PNMA3Q9UL41 463 aa9.98□□□□□ -0.81
LINC02541-201ENST00000427157 HPS5Q9UPZ3 1129 aa9.98□□□□□ -0.81
LINC02541-201ENST00000427157 NYAP1Q6ZVC0 841 aa9.97□□□□□ -0.81
LINC02541-201ENST00000427157 PADI6Q6TGC4 694 aa9.96□□□□□ -0.82
LINC02541-201ENST00000427157 SAMD7Q7Z3H4 446 aa9.96□□□□□ -0.82
LINC02541-201ENST00000427157 TTC13Q8NBP0 860 aa9.96□□□□□ -0.82
LINC02541-201ENST00000427157 TSR3Q9UJK0 312 aaKnown RBP9.96□□□□□ -0.82
LINC02541-201ENST00000427157 NUDT18Q6ZVK8 323 aa9.95□□□□□ -0.82
LINC02541-201ENST00000427157 SEMA3EO15041 775 aa9.94□□□□□ -0.82
LINC02541-201ENST00000427157 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
LINC02541-201ENST00000427157 A0A0G2JS52 829 aa9.91□□□□□ -0.82
LINC02541-201ENST00000427157 HAP1P54257 671 aaPredicted RBP9.91□□□□□ -0.82
LINC02541-201ENST00000427157 PTGDRQ13258 359 aa9.91□□□□□ -0.82
LINC02541-201ENST00000427157 PPP4CP60510 307 aa9.89□□□□□ -0.83
LINC02541-201ENST00000427157 NUTM2FA1L443 756 aa9.87□□□□□ -0.83
LINC02541-201ENST00000427157 RNF40O75150 1001 aa9.87□□□□□ -0.83
LINC02541-201ENST00000427157 KCNC4Q03721 635 aa9.86□□□□□ -0.83
LINC02541-201ENST00000427157 EYA1Q99502 592 aa9.86□□□□□ -0.83
LINC02541-201ENST00000427157 SWT1Q5T5J6 900 aaKnown RBP9.85□□□□□ -0.83
LINC02541-201ENST00000427157 TESPA1A2RU30 521 aaPredicted RBP9.84□□□□□ -0.83
LINC02541-201ENST00000427157 HDGFP51858 240 aaKnown RBP9.84□□□□□ -0.83
LINC02541-201ENST00000427157 KDM2AQ9Y2K7 1162 aa9.84□□□□□ -0.83
LINC02541-201ENST00000427157 FCHSD2O94868 740 aa9.82□□□□□ -0.84
LINC02541-201ENST00000427157 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
LINC02541-201ENST00000427157 RGS20O76081 388 aa9.81□□□□□ -0.84
LINC02541-201ENST00000427157 APLP1P51693 650 aa9.81□□□□□ -0.84
LINC02541-201ENST00000427157 FAM161AQ3B820 660 aa9.8□□□□□ -0.84
LINC02541-201ENST00000427157 TJAP1Q5JTD0 557 aa9.8□□□□□ -0.84
LINC02541-201ENST00000427157 RBM26Q5T8P6 1007 aaKnown RBP9.8□□□□□ -0.84
LINC02541-201ENST00000427157 SLF2Q8IX21 1173 aa9.8□□□□□ -0.84
LINC02541-201ENST00000427157 RBM46Q8TBY0 533 aaKnown RBP9.79□□□□□ -0.84
LINC02541-201ENST00000427157 MTRQ99707 1265 aa9.79□□□□□ -0.84
LINC02541-201ENST00000427157 DNAJB2P25686 324 aa9.78□□□□□ -0.84
LINC02541-201ENST00000427157 NECTIN2Q92692 538 aa9.77□□□□□ -0.85
LINC02541-201ENST00000427157 SMYD5Q6GMV2 418 aa9.76□□□□□ -0.85
LINC02541-201ENST00000427157 TMEM134Q9H6X4 195 aa9.76□□□□□ -0.85
LINC02541-201ENST00000427157 RCCD1A6NED2 376 aa9.75□□□□□ -0.85
LINC02541-201ENST00000427157 SLC4A3P48751 1232 aa9.75□□□□□ -0.85
LINC02541-201ENST00000427157 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
LINC02541-201ENST00000427157 GPR37O15354 613 aa9.74□□□□□ -0.85
LINC02541-201ENST00000427157 HIC1Q14526 733 aa9.74□□□□□ -0.85
LINC02541-201ENST00000427157 ZNF516Q92618 1163 aa9.74□□□□□ -0.85
LINC02541-201ENST00000427157 FECHP22830 423 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms