RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 IQGAP3Q86VI3 1631 aa20.68■□□□□ 0.9
CDK3-201ENST00000425876 KDM5CP41229 1560 aa20.68■□□□□ 0.9
CDK3-201ENST00000425876 MLH3Q9UHC1 1453 aa20.65■□□□□ 0.9
CDK3-201ENST00000425876 DHX29Q7Z478 1369 aaKnown RBP20.64■□□□□ 0.9
CDK3-201ENST00000425876 KIDINS220Q9ULH0 1771 aa20.63■□□□□ 0.89
CDK3-201ENST00000425876 EIF2AK4Q9P2K8 1649 aaKnown RBP20.63■□□□□ 0.89
CDK3-201ENST00000425876 L3MBTL2Q969R5 705 aa20.62■□□□□ 0.89
CDK3-201ENST00000425876 DEPDC5O75140 1603 aa20.62■□□□□ 0.89
CDK3-201ENST00000425876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.894e-6■□□□□ 11.1
CDK3-201ENST00000425876 HECW2Q9P2P5 1572 aa20.58■□□□□ 0.89
CDK3-201ENST00000425876 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.88
CDK3-201ENST00000425876 ATP10AO60312 1499 aa20.57■□□□□ 0.88
CDK3-201ENST00000425876 VWDEQ8N2E2 1590 aa20.56■□□□□ 0.88
CDK3-201ENST00000425876 A2MP01023 1474 aa20.55■□□□□ 0.88
CDK3-201ENST00000425876 FRMPD1Q5SYB0 1578 aa20.55■□□□□ 0.88
CDK3-201ENST00000425876 KANK1Q14678 1352 aa20.54■□□□□ 0.88
CDK3-201ENST00000425876 PRDM15P57071 1507 aaPredicted RBP20.53■□□□□ 0.88
CDK3-201ENST00000425876 RICTORQ6R327 1708 aa20.53■□□□□ 0.88
CDK3-201ENST00000425876 PLA2R1Q13018 1463 aa20.52■□□□□ 0.88
CDK3-201ENST00000425876 KIF3BO15066 747 aa20.51■□□□□ 0.87
CDK3-201ENST00000425876 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
CDK3-201ENST00000425876 BCORL1Q5H9F3 1711 aa20.5■□□□□ 0.87
CDK3-201ENST00000425876 MROH1Q8NDA8 1641 aa20.5■□□□□ 0.87
CDK3-201ENST00000425876 TET3O43151 1660 aa20.5■□□□□ 0.87
CDK3-201ENST00000425876 RNF17Q9BXT8 1623 aaKnown RBP20.49■□□□□ 0.87
CDK3-201ENST00000425876 RAPGEF3O95398 923 aa20.49■□□□□ 0.87
CDK3-201ENST00000425876 ABCA6Q8N139 1617 aa20.48■□□□□ 0.87
CDK3-201ENST00000425876 AEBP2Q6ZN18 517 aaPredicted RBP20.48■□□□□ 0.87
CDK3-201ENST00000425876 UHRF1BP1Q6BDS2 1440 aa20.47■□□□□ 0.87
CDK3-201ENST00000425876 ZMYM4Q5VZL5 1548 aa20.47■□□□□ 0.87
CDK3-201ENST00000425876 LMTK2Q8IWU2 1503 aa20.46■□□□□ 0.87
CDK3-201ENST00000425876 NBPF8Q3BBV2 869 aa20.46■□□□□ 0.87
CDK3-201ENST00000425876 PTPRTO14522 1441 aa20.45■□□□□ 0.86
CDK3-201ENST00000425876 E9PCH4 1651 aa20.45■□□□□ 0.86
CDK3-201ENST00000425876 DIP2CQ9Y2E4 1556 aa20.45■□□□□ 0.86
CDK3-201ENST00000425876 TRPM2O94759 1503 aa20.42■□□□□ 0.86
CDK3-201ENST00000425876 EIF4G2P78344 907 aaKnown RBP eCLIP20.4■□□□□ 0.86
CDK3-201ENST00000425876 EFCAB6Q5THR3 1501 aa20.39■□□□□ 0.86
CDK3-201ENST00000425876 SPHKAPQ2M3C7 1700 aa20.39■□□□□ 0.85
CDK3-201ENST00000425876 ARHGEF40Q8TER5 1519 aa20.37■□□□□ 0.85
CDK3-201ENST00000425876 YEATS2Q9ULM3 1422 aa20.37■□□□□ 0.85
CDK3-201ENST00000425876 HSPA5P11021 654 aaKnown RBP20.36■□□□□ 0.85
CDK3-201ENST00000425876 RALGAPBQ86X10 1494 aa20.36■□□□□ 0.85
CDK3-201ENST00000425876 SPATA31E1Q6ZUB1 1445 aa20.35■□□□□ 0.85
CDK3-201ENST00000425876 NEURL4Q96JN8 1562 aa20.34■□□□□ 0.85
CDK3-201ENST00000425876 REREQ9P2R6 1566 aa20.34■□□□□ 0.85
CDK3-201ENST00000425876 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
CDK3-201ENST00000425876 MIER1Q8N108 512 aa20.32■□□□□ 0.84
CDK3-201ENST00000425876 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
CDK3-201ENST00000425876 HIRIP3Q9BW71 556 aaPredicted RBP20.32■□□□□ 0.84
CDK3-201ENST00000425876 ABCC3O15438 1527 aa20.32■□□□□ 0.84
CDK3-201ENST00000425876 CEP152O94986 1710 aa20.31■□□□□ 0.84
CDK3-201ENST00000425876 GGT6Q6P531 493 aa20.31■□□□□ 0.84
CDK3-201ENST00000425876 PRAG1Q86YV5 1406 aa20.3■□□□□ 0.84
CDK3-201ENST00000425876 CLTCL1P53675 1640 aa20.3■□□□□ 0.84
CDK3-201ENST00000425876 SIGLEC1Q9BZZ2 1709 aa20.3■□□□□ 0.84
CDK3-201ENST00000425876 KDM4FA0A1W2PPD8 638 aa20.29■□□□□ 0.84
CDK3-201ENST00000425876 RGL3Q3MIN7 710 aa20.29■□□□□ 0.84
CDK3-201ENST00000425876 WASHC2CQ9Y4E1 1318 aa20.28■□□□□ 0.84
CDK3-201ENST00000425876 AGLP35573 1532 aa20.28■□□□□ 0.84
CDK3-201ENST00000425876 ZC3H13Q5T200 1668 aaKnown RBP20.28■□□□□ 0.84
CDK3-201ENST00000425876 ZNF326Q5BKZ1 582 aaKnown RBP20.28■□□□□ 0.84
CDK3-201ENST00000425876 KDM2AQ9Y2K7 1162 aa20.28■□□□□ 0.84
CDK3-201ENST00000425876 NPATQ14207 1427 aa20.27■□□□□ 0.84
CDK3-201ENST00000425876 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
CDK3-201ENST00000425876 CNTLNQ9NXG0 1405 aa20.26■□□□□ 0.83
CDK3-201ENST00000425876 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
CDK3-201ENST00000425876 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
CDK3-201ENST00000425876 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
CDK3-201ENST00000425876 USP47Q96K76 1375 aa20.24■□□□□ 0.83
CDK3-201ENST00000425876 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
CDK3-201ENST00000425876 GPRASP1Q5JY77 1395 aa20.23■□□□□ 0.83
CDK3-201ENST00000425876 NOS1P29475 1434 aa20.22■□□□□ 0.83
CDK3-201ENST00000425876 CARD11Q9BXL7 1154 aa20.21■□□□□ 0.83
CDK3-201ENST00000425876 WASHC2AQ641Q2 1341 aa20.21■□□□□ 0.83
CDK3-201ENST00000425876 LAMC1P11047 1609 aa20.2■□□□□ 0.82
CDK3-201ENST00000425876 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
CDK3-201ENST00000425876 KIF1BO60333 1816 aa20.18■□□□□ 0.82
CDK3-201ENST00000425876 CCDC7Q96M83 1385 aa20.18■□□□□ 0.82
CDK3-201ENST00000425876 UGGT1Q9NYU2 1555 aa20.17■□□□□ 0.82
CDK3-201ENST00000425876 ARID4BQ4LE39 1312 aaPredicted RBP20.17■□□□□ 0.82
CDK3-201ENST00000425876 POLR1AO95602 1720 aaPredicted RBP20.16■□□□□ 0.82
CDK3-201ENST00000425876 MADDQ8WXG6 1647 aa20.16■□□□□ 0.82
CDK3-201ENST00000425876 ADGRB3O60242 1522 aa20.16■□□□□ 0.82
CDK3-201ENST00000425876 MYOM2P54296 1465 aa20.15■□□□□ 0.82
CDK3-201ENST00000425876 ADAMTSL3P82987 1691 aa20.15■□□□□ 0.82
CDK3-201ENST00000425876 C11orf95C9JLR9 678 aaPredicted RBP20.13■□□□□ 0.81
CDK3-201ENST00000425876 PIK3C2BO00750 1634 aa20.13■□□□□ 0.81
CDK3-201ENST00000425876 KIF7Q2M1P5 1343 aa20.11■□□□□ 0.81
CDK3-201ENST00000425876 SYNMO15061 1565 aa20.11■□□□□ 0.81
CDK3-201ENST00000425876 NBPF1Q3BBV0 1214 aa20.11■□□□□ 0.81
CDK3-201ENST00000425876 RPGRIP1LQ68CZ1 1315 aa20.11■□□□□ 0.81
CDK3-201ENST00000425876 SLC52A1Q9NWF4 448 aa20.1■□□□□ 0.81
CDK3-201ENST00000425876 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
CDK3-201ENST00000425876 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
CDK3-201ENST00000425876 MROH2AA6NES4 1674 aa20.09■□□□□ 0.81
CDK3-201ENST00000425876 NRXN1Q9ULB1 1477 aa20.08■□□□□ 0.81
CDK3-201ENST00000425876 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.81
CDK3-201ENST00000425876 ST20-MTHFSA0A0A6YYL1 179 aa20.08■□□□□ 0.8
CDK3-201ENST00000425876 PREX1Q8TCU6 1659 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms