RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 CRISPLD2Q9H0B8 497 aa9.2□□□□□ -0.94
R3HDM1-205ENST00000425804 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
R3HDM1-205ENST00000425804 SEPT9Q9UHD8 586 aaPredicted RBP9.17□□□□□ -0.94
R3HDM1-205ENST00000425804 TSR3Q9UJK0 312 aaKnown RBP9.16□□□□□ -0.94
R3HDM1-205ENST00000425804 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
R3HDM1-205ENST00000425804 PCDHGA10Q9Y5H3 936 aa9.16□□□□□ -0.94
R3HDM1-205ENST00000425804 PKD2Q13563 968 aa9.14□□□□□ -0.95
R3HDM1-205ENST00000425804 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.14□□□□□ -0.95
R3HDM1-205ENST00000425804 V9GY48 417 aaPredicted RBP9.13□□□□□ -0.95
R3HDM1-205ENST00000425804 LRCH3Q96II8 777 aa9.12□□□□□ -0.95
R3HDM1-205ENST00000425804 ONECUT3O60422 494 aaPredicted RBP9.11□□□□□ -0.95
R3HDM1-205ENST00000425804 FAM98CQ17RN3 349 aaKnown RBP9.11□□□□□ -0.95
R3HDM1-205ENST00000425804 PDZRN3Q9UPQ7 1066 aa9.11□□□□□ -0.95
R3HDM1-205ENST00000425804 NCKAP5LQ9HCH0 1330 aa9.1□□□□□ -0.95
R3HDM1-205ENST00000425804 MAP3K9P80192 1104 aa9.1□□□□□ -0.95
R3HDM1-205ENST00000425804 TJAP1Q5JTD0 557 aa9.09□□□□□ -0.95
R3HDM1-205ENST00000425804 TYW1BQ6NUM6 668 aa9.09□□□□□ -0.95
R3HDM1-205ENST00000425804 PPP1R18Q6NYC8 613 aa9.09□□□□□ -0.95
R3HDM1-205ENST00000425804 FBXW7Q969H0 707 aa9.09□□□□□ -0.95
R3HDM1-205ENST00000425804 HS6ST3Q8IZP7 471 aa9.08□□□□□ -0.96
R3HDM1-205ENST00000425804 TRIM6-TRIM34B2RNG4 842 aa9.06□□□□□ -0.96
R3HDM1-205ENST00000425804 PDE4AP27815 886 aa9.06□□□□□ -0.96
R3HDM1-205ENST00000425804 PHF14O94880 888 aa9.05□□□□□ -0.96
R3HDM1-205ENST00000425804 PPP4CP60510 307 aa9.04□□□□□ -0.96
R3HDM1-205ENST00000425804 MTRQ99707 1265 aa9.03□□□□□ -0.96
R3HDM1-205ENST00000425804 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.03□□□□□ -0.96
R3HDM1-205ENST00000425804 C6orf132Q5T0Z8 1188 aa9.02□□□□□ -0.97
R3HDM1-205ENST00000425804 IL21Q9HBE4 155 aa9.02□□□□□ -0.97
R3HDM1-205ENST00000425804 EMILIN3Q9NT22 766 aa9.02□□□□□ -0.97
R3HDM1-205ENST00000425804 DDX27Q96GQ7 796 aaKnown RBP9.01□□□□□ -0.97
R3HDM1-205ENST00000425804 LARP6Q9BRS8 491 aaKnown RBP9□□□□□ -0.97
R3HDM1-205ENST00000425804 NKX1-1Q15270 411 aaPredicted RBP8.98□□□□□ -0.97
R3HDM1-205ENST00000425804 ZNF516Q92618 1163 aa8.98□□□□□ -0.97
R3HDM1-205ENST00000425804 POTECB2RU33 542 aa8.97□□□□□ -0.97
R3HDM1-205ENST00000425804 EPAS1Q99814 870 aa8.96□□□□□ -0.98
R3HDM1-205ENST00000425804 RYDENQ9NUL5 291 aaKnown RBP8.95□□□□□ -0.98
R3HDM1-205ENST00000425804 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
R3HDM1-205ENST00000425804 MYT1Q01538 1121 aa8.94□□□□□ -0.98
R3HDM1-205ENST00000425804 MFSD10Q14728 455 aa8.94□□□□□ -0.98
R3HDM1-205ENST00000425804 SAMD7Q7Z3H4 446 aa8.94□□□□□ -0.98
R3HDM1-205ENST00000425804 RBM33Q96EV2 1170 aaKnown RBP8.94□□□□□ -0.98
R3HDM1-205ENST00000425804 TSKSQ9UJT2 592 aa8.94□□□□□ -0.98
R3HDM1-205ENST00000425804 TREML4Q6UXN2 200 aa8.93□□□□□ -0.98
R3HDM1-205ENST00000425804 TRIM67Q6ZTA4 783 aa8.93□□□□□ -0.98
R3HDM1-205ENST00000425804 PACS2Q86VP3 889 aa8.93□□□□□ -0.98
R3HDM1-205ENST00000425804 NKX2-3Q8TAU0 364 aa8.93□□□□□ -0.98
R3HDM1-205ENST00000425804 PKDCCQ504Y2 493 aa8.92□□□□□ -0.98
R3HDM1-205ENST00000425804 LCE2AQ5TA79 106 aaPredicted RBP8.92□□□□□ -0.98
R3HDM1-205ENST00000425804 DNAJC5Q9H3Z4 198 aa8.91□□□□□ -0.98
R3HDM1-205ENST00000425804 GGCXP38435 758 aa8.9□□□□□ -0.98
R3HDM1-205ENST00000425804 SMAPO00193 183 aa8.89□□□□□ -0.99
R3HDM1-205ENST00000425804 DGAT1O75907 488 aa8.89□□□□□ -0.99
R3HDM1-205ENST00000425804 APLP1P51693 650 aa8.87□□□□□ -0.99
R3HDM1-205ENST00000425804 TMUB1Q9BVT8 246 aa8.86□□□□□ -0.99
R3HDM1-205ENST00000425804 RNF40O75150 1001 aa8.84□□□□□ -0.99
R3HDM1-205ENST00000425804 TSR1Q2NL82 804 aaKnown RBP8.84□□□□□ -0.99
R3HDM1-205ENST00000425804 DDX12PQ92771 950 aa8.84□□□□□ -0.99
R3HDM1-205ENST00000425804 SLC19A1P41440 591 aa8.83□□□□□ -1
R3HDM1-205ENST00000425804 COPS2P61201 443 aa8.83□□□□□ -1
R3HDM1-205ENST00000425804 EMID1Q96A84 441 aaPredicted RBP8.83□□□□□ -1
R3HDM1-205ENST00000425804 C3orf80F5H4A9 247 aa8.82□□□□□ -1
R3HDM1-205ENST00000425804 FAM198AQ9UFP1 575 aa8.82□□□□□ -1
R3HDM1-205ENST00000425804 FAM187AA6NFU0 413 aa8.81□□□□□ -1
R3HDM1-205ENST00000425804 DPYSL4O14531 572 aa8.81□□□□□ -1
R3HDM1-205ENST00000425804 PRR20EP86478 221 aa8.81□□□□□ -1
R3HDM1-205ENST00000425804 PRR20CP86479 221 aa8.81□□□□□ -1
R3HDM1-205ENST00000425804 PRR20DP86480 221 aa8.81□□□□□ -1
R3HDM1-205ENST00000425804 PRR20BP86481 221 aa8.81□□□□□ -1
R3HDM1-205ENST00000425804 PRR20AP86496 221 aa8.81□□□□□ -1
R3HDM1-205ENST00000425804 EN1Q05925 392 aaPredicted RBP8.81□□□□□ -1
R3HDM1-205ENST00000425804 CDCA7LQ96GN5 454 aa8.81□□□□□ -1
R3HDM1-205ENST00000425804 MAP3K7O43318 606 aa8.8□□□□□ -1
R3HDM1-205ENST00000425804 STK17AQ9UEE5 414 aa8.8□□□□□ -1
R3HDM1-205ENST00000425804 ST8SIA5O15466 376 aa8.79□□□□□ -1
R3HDM1-205ENST00000425804 SPRYD7Q5W111 196 aa8.79□□□□□ -1
R3HDM1-205ENST00000425804 TATDN2Q93075 761 aa8.79□□□□□ -1
R3HDM1-205ENST00000425804 RNF223E7ERA6 249 aa8.78□□□□□ -1
R3HDM1-205ENST00000425804 PRSS12P56730 875 aa8.78□□□□□ -1
R3HDM1-205ENST00000425804 NBR1Q14596 966 aa8.78□□□□□ -1
R3HDM1-205ENST00000425804 ZNF598Q86UK7 904 aaKnown RBP8.78□□□□□ -1
R3HDM1-205ENST00000425804 PNMA3Q9UL41 463 aa8.78□□□□□ -1
R3HDM1-205ENST00000425804 NBPF26B4DH59 902 aa8.77□□□□□ -1.01
R3HDM1-205ENST00000425804 ZPR1O75312 459 aa8.77□□□□□ -1.01
R3HDM1-205ENST00000425804 AAASQ9NRG9 546 aa8.77□□□□□ -1.01
R3HDM1-205ENST00000425804 GTPBP6O43824 516 aaPredicted RBP8.76□□□□□ -1.01
R3HDM1-205ENST00000425804 WFS1O76024 890 aa8.76□□□□□ -1.01
R3HDM1-205ENST00000425804 HDGFP51858 240 aaKnown RBP8.76□□□□□ -1.01
R3HDM1-205ENST00000425804 CAMK2BQ13554 666 aa8.75□□□□□ -1.01
R3HDM1-205ENST00000425804 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
R3HDM1-205ENST00000425804 TNFRSF10AO00220 468 aa8.74□□□□□ -1.01
R3HDM1-205ENST00000425804 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
R3HDM1-205ENST00000425804 GDF9O60383 454 aa8.73□□□□□ -1.01
R3HDM1-205ENST00000425804 ZNF697Q5TEC3 545 aa8.73□□□□□ -1.01
R3HDM1-205ENST00000425804 NUDT18Q6ZVK8 323 aa8.72□□□□□ -1.01
R3HDM1-205ENST00000425804 CADPS2Q86UW7 1296 aa8.72□□□□□ -1.01
R3HDM1-205ENST00000425804 NECTIN2Q92692 538 aa8.72□□□□□ -1.01
R3HDM1-205ENST00000425804 LIAT1Q6ZQX7 453 aa8.71□□□□□ -1.02
R3HDM1-205ENST00000425804 WIPF1O43516 503 aa8.7□□□□□ -1.02
R3HDM1-205ENST00000425804 INSM1Q01101 510 aaPredicted RBP8.7□□□□□ -1.02
R3HDM1-205ENST00000425804 ANKLE1Q8NAG6 615 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms