RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CLASP1Q7Z460 1538 aa15.88■□□□□ 0.13
UBR4-207ENST00000425413 ZCCHC11Q5TAX3 1644 aaKnown RBP15.88■□□□□ 0.13
UBR4-207ENST00000425413 SPAG9O60271 1321 aaKnown RBP15.87■□□□□ 0.13
UBR4-207ENST00000425413 KDM5DQ9BY66 1539 aa15.86■□□□□ 0.13
UBR4-207ENST00000425413 BCORL1Q5H9F3 1711 aa15.86■□□□□ 0.13
UBR4-207ENST00000425413 MYO5CQ9NQX4 1742 aa15.85■□□□□ 0.13
UBR4-207ENST00000425413 PLA2R1Q13018 1463 aa15.84■□□□□ 0.13
UBR4-207ENST00000425413 RALGAPBQ86X10 1494 aa15.84■□□□□ 0.13
UBR4-207ENST00000425413 UHRF1BP1Q6BDS2 1440 aa15.84■□□□□ 0.13
UBR4-207ENST00000425413 DHX29Q7Z478 1369 aaKnown RBP15.83■□□□□ 0.12
UBR4-207ENST00000425413 KDM5CP41229 1560 aa15.82■□□□□ 0.12
UBR4-207ENST00000425413 UHRF1BP1LA0JNW5 1464 aa15.8■□□□□ 0.12
UBR4-207ENST00000425413 KIF3BO15066 747 aa15.79■□□□□ 0.12
UBR4-207ENST00000425413 TSHZ2Q9NRE2 1034 aa15.79■□□□□ 0.12
UBR4-207ENST00000425413 DUOX2Q9NRD8 1548 aa15.78■□□□□ 0.12
UBR4-207ENST00000425413 PRAG1Q86YV5 1406 aa15.78■□□□□ 0.12
UBR4-207ENST00000425413 TMC1Q8TDI8 760 aa15.78■□□□□ 0.12
UBR4-207ENST00000425413 A2MP01023 1474 aa15.77■□□□□ 0.12
UBR4-207ENST00000425413 MAST1Q9Y2H9 1570 aa15.77■□□□□ 0.12
UBR4-207ENST00000425413 ABCC1P33527 1531 aa15.77■□□□□ 0.11
UBR4-207ENST00000425413 SCAPERQ9BY12 1400 aa15.76■□□□□ 0.11
UBR4-207ENST00000425413 WDR7Q9Y4E6 1490 aa15.76■□□□□ 0.11
UBR4-207ENST00000425413 FANCAO15360 1455 aa15.75■□□□□ 0.11
UBR4-207ENST00000425413 ERBINQ96RT1 1412 aa15.74■□□□□ 0.11
UBR4-207ENST00000425413 UNC13BO14795 1591 aa15.74■□□□□ 0.11
UBR4-207ENST00000425413 PLXNC1O60486 1568 aa15.74■□□□□ 0.11
UBR4-207ENST00000425413 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
UBR4-207ENST00000425413 ARID4BQ4LE39 1312 aaPredicted RBP15.73■□□□□ 0.11
UBR4-207ENST00000425413 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
UBR4-207ENST00000425413 SALL2Q9Y467 1007 aaPredicted RBP15.73■□□□□ 0.11
UBR4-207ENST00000425413 ASXL2Q76L83 1435 aa15.72■□□□□ 0.11
UBR4-207ENST00000425413 CC2D1BQ5T0F9 858 aaKnown RBP15.72■□□□□ 0.11
UBR4-207ENST00000425413 ZBED9Q6R2W3 1325 aa15.72■□□□□ 0.11
UBR4-207ENST00000425413 IQGAP3Q86VI3 1631 aa15.71■□□□□ 0.1
UBR4-207ENST00000425413 POLR1AO95602 1720 aaPredicted RBP15.7■□□□□ 0.1
UBR4-207ENST00000425413 DISP3Q9P2K9 1392 aa15.7■□□□□ 0.1
UBR4-207ENST00000425413 ADGRL1O94910 1474 aa15.7■□□□□ 0.1
UBR4-207ENST00000425413 TESK2Q96S53 571 aa15.69■□□□□ 0.1
UBR4-207ENST00000425413 PNISRQ8TF01 805 aaKnown RBP15.68■□□□□ 0.1
UBR4-207ENST00000425413 CHGAP10645 457 aaKnown RBP15.67■□□□□ 0.1
UBR4-207ENST00000425413 ZFYVE16Q7Z3T8 1539 aa15.67■□□□□ 0.1
UBR4-207ENST00000425413 PANK3Q9H999 370 aa15.67■□□□□ 0.1
UBR4-207ENST00000425413 TRPM1Q7Z4N2 1603 aa15.66■□□□□ 0.1
UBR4-207ENST00000425413 KANK1Q14678 1352 aa15.66■□□□□ 0.1
UBR4-207ENST00000425413 MYT1Q01538 1121 aa15.66■□□□□ 0.1
UBR4-207ENST00000425413 MAGI2Q86UL8 1455 aa15.66■□□□□ 0.1
UBR4-207ENST00000425413 GGT6Q6P531 493 aa15.65■□□□□ 0.1
UBR4-207ENST00000425413 TMF1P82094 1093 aa15.65■□□□□ 0.1
UBR4-207ENST00000425413 MYBBP1AQ9BQG0 1328 aaKnown RBP15.65■□□□□ 0.1
UBR4-207ENST00000425413 RTEL1-TNFRSF6BF6WH68 1400 aa15.65■□□□□ 0.1
UBR4-207ENST00000425413 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
UBR4-207ENST00000425413 ATP7AQ04656 1500 aa15.64■□□□□ 0.09
UBR4-207ENST00000425413 GPRASP1Q5JY77 1395 aa15.63■□□□□ 0.09
UBR4-207ENST00000425413 ATP10AO60312 1499 aa15.63■□□□□ 0.09
UBR4-207ENST00000425413 RALBP1Q15311 655 aa15.63■□□□□ 0.09
UBR4-207ENST00000425413 KTN1Q86UP2 1357 aaKnown RBP15.62■□□□□ 0.09
UBR4-207ENST00000425413 B4GALNT3Q6L9W6 998 aa15.62■□□□□ 0.09
UBR4-207ENST00000425413 PER1O15534 1290 aaPredicted RBP15.61■□□□□ 0.09
UBR4-207ENST00000425413 E9PCH4 1651 aa15.61■□□□□ 0.09
UBR4-207ENST00000425413 RAPGEF3O95398 923 aa15.6■□□□□ 0.09
UBR4-207ENST00000425413 CFAP70Q5T0N1 1121 aa15.6■□□□□ 0.09
UBR4-207ENST00000425413 UGGT1Q9NYU2 1555 aa15.6■□□□□ 0.09
UBR4-207ENST00000425413 NLRP13Q86W25 1043 aa15.59■□□□□ 0.09
UBR4-207ENST00000425413 CD109Q6YHK3 1445 aa15.58■□□□□ 0.09
UBR4-207ENST00000425413 ARAP3Q8WWN8 1544 aa15.58■□□□□ 0.09
UBR4-207ENST00000425413 ABCA9Q8IUA7 1624 aa15.58■□□□□ 0.09
UBR4-207ENST00000425413 COL17A1Q9UMD9 1497 aaPredicted RBP15.58■□□□□ 0.08
UBR4-207ENST00000425413 NUDCQ9Y266 331 aa15.57■□□□□ 0.08
UBR4-207ENST00000425413 ADGRF5Q8IZF2 1346 aa15.57■□□□□ 0.08
UBR4-207ENST00000425413 BRD4O60885 1362 aaPredicted RBP15.57■□□□□ 0.08
UBR4-207ENST00000425413 PRDM15P57071 1507 aaPredicted RBP15.57■□□□□ 0.08
UBR4-207ENST00000425413 NUTM2DQ5VT03 806 aaPredicted RBP15.56■□□□□ 0.08
UBR4-207ENST00000425413 CLTCL1P53675 1640 aa15.56■□□□□ 0.08
UBR4-207ENST00000425413 PPP4R2Q9NY27 417 aa15.56■□□□□ 0.08
UBR4-207ENST00000425413 INO80Q9ULG1 1556 aaPredicted RBP15.55■□□□□ 0.08
UBR4-207ENST00000425413 PTPRTO14522 1441 aa15.55■□□□□ 0.08
UBR4-207ENST00000425413 TRPM2O94759 1503 aa15.55■□□□□ 0.08
UBR4-207ENST00000425413 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
UBR4-207ENST00000425413 RBM19Q9Y4C8 960 aaKnown RBP15.54■□□□□ 0.08
UBR4-207ENST00000425413 PARD3Q8TEW0 1356 aa15.54■□□□□ 0.08
UBR4-207ENST00000425413 KNSTRNQ9Y448 316 aa15.54■□□□□ 0.08
UBR4-207ENST00000425413 EIF2AK4Q9P2K8 1649 aaKnown RBP15.53■□□□□ 0.08
UBR4-207ENST00000425413 WASHC2CQ9Y4E1 1318 aa15.52■□□□□ 0.08
UBR4-207ENST00000425413 SMG6Q86US8 1419 aaKnown RBP15.52■□□□□ 0.08
UBR4-207ENST00000425413 ZNF518AQ6AHZ1 1483 aa15.51■□□□□ 0.07
UBR4-207ENST00000425413 LRPPRCP42704 1394 aaKnown RBP15.51■□□□□ 0.07
UBR4-207ENST00000425413 SPHKAPQ2M3C7 1700 aa15.51■□□□□ 0.07
UBR4-207ENST00000425413 MADDQ8WXG6 1647 aa15.5■□□□□ 0.07
UBR4-207ENST00000425413 CDCA7LQ96GN5 454 aa15.5■□□□□ 0.07
UBR4-207ENST00000425413 CFAP65Q6ZU64 1925 aaKnown RBP15.5■□□□□ 0.07
UBR4-207ENST00000425413 TET3O43151 1660 aa15.5■□□□□ 0.07
UBR4-207ENST00000425413 TMEM132EQ6IEE7 984 aa15.49■□□□□ 0.07
UBR4-207ENST00000425413 TRAK1Q9UPV9 953 aa15.49■□□□□ 0.07
UBR4-207ENST00000425413 SCAF11Q99590 1463 aaKnown RBP15.49■□□□□ 0.07
UBR4-207ENST00000425413 DEPDC5O75140 1603 aa15.48■□□□□ 0.07
UBR4-207ENST00000425413 KIDINS220Q9ULH0 1771 aa15.48■□□□□ 0.07
UBR4-207ENST00000425413 MROH1Q8NDA8 1641 aa15.47■□□□□ 0.07
UBR4-207ENST00000425413 POGZQ7Z3K3 1410 aa15.47■□□□□ 0.07
UBR4-207ENST00000425413 CDCA8Q53HL2 280 aa15.46■□□□□ 0.07
UBR4-207ENST00000425413 NOS1P29475 1434 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms