RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 C6orf132Q5T0Z8 1188 aa9.12□□□□□ -0.95
HDAC9-209ENST00000425071 ADAM33Q9BZ11 813 aa9.12□□□□□ -0.95
HDAC9-209ENST00000425071 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
HDAC9-209ENST00000425071 RBM26Q5T8P6 1007 aaKnown RBP9.1□□□□□ -0.95
HDAC9-209ENST00000425071 RBM33Q96EV2 1170 aaKnown RBP9.1□□□□□ -0.95
HDAC9-209ENST00000425071 GPIHBP1Q8IV16 184 aa9.09□□□□□ -0.95
HDAC9-209ENST00000425071 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
HDAC9-209ENST00000425071 FCHSD2O94868 740 aa9.08□□□□□ -0.96
HDAC9-209ENST00000425071 PPP1R3GB7ZBB8 358 aa9.07□□□□□ -0.96
HDAC9-209ENST00000425071 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
HDAC9-209ENST00000425071 POTEB3A0JP26 581 aa9.06□□□□□ -0.96
HDAC9-209ENST00000425071 HIC1Q14526 733 aa9.06□□□□□ -0.96
HDAC9-209ENST00000425071 POTEBQ6S5H4 581 aa9.06□□□□□ -0.96
HDAC9-209ENST00000425071 ONECUT3O60422 494 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-209ENST00000425071 PTGDRQ13258 359 aa9.05□□□□□ -0.96
HDAC9-209ENST00000425071 TSR1Q2NL82 804 aaKnown RBP9.05□□□□□ -0.96
HDAC9-209ENST00000425071 SLC4A5Q9BY07 1137 aa9.05□□□□□ -0.96
HDAC9-209ENST00000425071 RBM27Q9P2N5 1060 aaKnown RBP9.05□□□□□ -0.96
HDAC9-209ENST00000425071 KCNK17Q96T54 332 aa9.04□□□□□ -0.96
HDAC9-209ENST00000425071 NPDC1Q9NQX5 325 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-209ENST00000425071 ZC3H15Q8WU90 426 aaKnown RBP9.02□□□□□ -0.97
HDAC9-209ENST00000425071 TK2O00142 265 aa9.01□□□□□ -0.97
HDAC9-209ENST00000425071 GNPATO15228 680 aa9.01□□□□□ -0.97
HDAC9-209ENST00000425071 POTEEQ6S8J3 1075 aa9.01□□□□□ -0.97
HDAC9-209ENST00000425071 CDHR5Q9HBB8 845 aa9.01□□□□□ -0.97
HDAC9-209ENST00000425071 GPR37O15354 613 aa9□□□□□ -0.97
HDAC9-209ENST00000425071 COL9A1P20849 921 aa9□□□□□ -0.97
HDAC9-209ENST00000425071 PSEN2P49810 448 aa9□□□□□ -0.97
HDAC9-209ENST00000425071 PRSS12P56730 875 aa9□□□□□ -0.97
HDAC9-209ENST00000425071 ZMYND10O75800 440 aa8.99□□□□□ -0.97
HDAC9-209ENST00000425071 ZBED2Q9BTP6 218 aa8.99□□□□□ -0.97
HDAC9-209ENST00000425071 LSM11P83369 360 aaKnown RBP eCLIP8.98□□□□□ -0.97
HDAC9-209ENST00000425071 SPNS2Q8IVW8 549 aa8.98□□□□□ -0.97
HDAC9-209ENST00000425071 CDCA7LQ96GN5 454 aa8.98□□□□□ -0.97
HDAC9-209ENST00000425071 AXIN2Q9Y2T1 843 aa8.98□□□□□ -0.97
HDAC9-209ENST00000425071 TRIM6-TRIM34B2RNG4 842 aa8.97□□□□□ -0.97
HDAC9-209ENST00000425071 BARGINQ6ZT62 677 aa8.97□□□□□ -0.97
HDAC9-209ENST00000425071 PACS2Q86VP3 889 aa8.97□□□□□ -0.97
HDAC9-209ENST00000425071 TTC13Q8NBP0 860 aa8.97□□□□□ -0.97
HDAC9-209ENST00000425071 DMRTA1Q5VZB9 504 aa8.96□□□□□ -0.98
HDAC9-209ENST00000425071 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
HDAC9-209ENST00000425071 KRTAP3-2Q9BYR7 98 aa8.96□□□□□ -0.98
HDAC9-209ENST00000425071 RABGEF1Q9UJ41 708 aa8.96□□□□□ -0.98
HDAC9-209ENST00000425071 MINK1Q8N4C8 1332 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-209ENST00000425071 VPS9D1Q9Y2B5 631 aa8.95□□□□□ -0.98
HDAC9-209ENST00000425071 MAP2K5Q13163 448 aa8.94□□□□□ -0.98
HDAC9-209ENST00000425071 MMRN1Q13201 1228 aa8.94□□□□□ -0.98
HDAC9-209ENST00000425071 OATP04181 439 aa8.93□□□□□ -0.98
HDAC9-209ENST00000425071 ADGRD1Q6QNK2 874 aa8.93□□□□□ -0.98
HDAC9-209ENST00000425071 PADI6Q6TGC4 694 aa8.93□□□□□ -0.98
HDAC9-209ENST00000425071 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
HDAC9-209ENST00000425071 NBPF3Q9H094 633 aa8.93□□□□□ -0.98
HDAC9-209ENST00000425071 NBPF26B4DH59 902 aa8.92□□□□□ -0.98
HDAC9-209ENST00000425071 TPRNQ4KMQ1 711 aa8.92□□□□□ -0.98
HDAC9-209ENST00000425071 TSKSQ9UJT2 592 aa8.92□□□□□ -0.98
HDAC9-209ENST00000425071 IRF6O14896 467 aa8.91□□□□□ -0.98
HDAC9-209ENST00000425071 PROX2Q3B8N5 592 aa8.91□□□□□ -0.98
HDAC9-209ENST00000425071 ANKRD13DQ6ZTN6 518 aa8.91□□□□□ -0.98
HDAC9-209ENST00000425071 BHMG1C9JSJ3 638 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-209ENST00000425071 LAPTM4BQ86VI4 370 aa8.9□□□□□ -0.98
HDAC9-209ENST00000425071 RBM46Q8TBY0 533 aaKnown RBP8.9□□□□□ -0.98
HDAC9-209ENST00000425071 KIAA1468Q9P260 1216 aa8.9□□□□□ -0.98
HDAC9-209ENST00000425071 FECHP22830 423 aa8.89□□□□□ -0.99
HDAC9-209ENST00000425071 TATDN2Q93075 761 aa8.89□□□□□ -0.99
HDAC9-209ENST00000425071 STAC3Q96MF2 364 aa8.89□□□□□ -0.99
HDAC9-209ENST00000425071 ADGRG1Q9Y653 693 aa8.89□□□□□ -0.99
HDAC9-209ENST00000425071 HRO43593 1189 aa8.88□□□□□ -0.99
HDAC9-209ENST00000425071 AK7Q96M32 723 aa8.88□□□□□ -0.99
HDAC9-209ENST00000425071 FAM198AQ9UFP1 575 aa8.87□□□□□ -0.99
HDAC9-209ENST00000425071 NUDT18Q6ZVK8 323 aa8.86□□□□□ -0.99
HDAC9-209ENST00000425071 MRPL50Q8N5N7 158 aaKnown RBP8.86□□□□□ -0.99
HDAC9-209ENST00000425071 EYA1Q99502 592 aa8.86□□□□□ -0.99
HDAC9-209ENST00000425071 PNMA3Q9UL41 463 aa8.86□□□□□ -0.99
HDAC9-209ENST00000425071 FAM98CQ17RN3 349 aaKnown RBP8.85□□□□□ -0.99
HDAC9-209ENST00000425071 METTL3Q86U44 580 aaKnown RBP8.85□□□□□ -0.99
HDAC9-209ENST00000425071 PXYLP1Q8TE99 480 aa8.85□□□□□ -0.99
HDAC9-209ENST00000425071 CCDC102AQ96A19 550 aa8.85□□□□□ -0.99
HDAC9-209ENST00000425071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.84□□□□□ -0.99
HDAC9-209ENST00000425071 HDGFP51858 240 aaKnown RBP8.83□□□□□ -1
HDAC9-209ENST00000425071 SLC24A3Q9HC58 644 aa8.83□□□□□ -1
HDAC9-209ENST00000425071 DNAJB2P25686 324 aa8.82□□□□□ -1
HDAC9-209ENST00000425071 GOLGA8CPA6NN73 597 aa8.81□□□□□ -1
HDAC9-209ENST00000425071 SLC4A3P48751 1232 aa8.8□□□□□ -1
HDAC9-209ENST00000425071 AMHR2Q16671 573 aa8.8□□□□□ -1
HDAC9-209ENST00000425071 RCCD1A6NED2 376 aa8.79□□□□□ -1
HDAC9-209ENST00000425071 TRIM66O15016 1216 aa8.79□□□□□ -1
HDAC9-209ENST00000425071 ZFRQ96KR1 1074 aaKnown RBP8.79□□□□□ -1
HDAC9-209ENST00000425071 SEPT9Q9UHD8 586 aaPredicted RBP8.79□□□□□ -1
HDAC9-209ENST00000425071 C3orf80F5H4A9 247 aa8.78□□□□□ -1
HDAC9-209ENST00000425071 SMAPO00193 183 aa8.78□□□□□ -1
HDAC9-209ENST00000425071 FAM161AQ3B820 660 aa8.78□□□□□ -1
HDAC9-209ENST00000425071 NECTIN2Q92692 538 aa8.78□□□□□ -1
HDAC9-209ENST00000425071 TMEM134Q9H6X4 195 aa8.78□□□□□ -1
HDAC9-209ENST00000425071 PRKCSHP14314 528 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-209ENST00000425071 CLCN1P35523 988 aa8.77□□□□□ -1.01
HDAC9-209ENST00000425071 ANKK1Q8NFD2 765 aa8.77□□□□□ -1.01
HDAC9-209ENST00000425071 DAXXQ9UER7 740 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-209ENST00000425071 RSPH4AQ5TD94 716 aa8.76□□□□□ -1.01
HDAC9-209ENST00000425071 MYT1LQ9UL68 1186 aa8.76□□□□□ -1.01
HDAC9-209ENST00000425071 SLF2Q8IX21 1173 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms