RNA–Protein interactions for RNA: ENST00000424867.1

PBRM1-212, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-212ENST00000424867 LAPTM4BQ86VI4 370 aa13.25□□□□□ -0.29
PBRM1-212ENST00000424867 EMILIN3Q9NT22 766 aa13.25□□□□□ -0.29
PBRM1-212ENST00000424867 Q6ZNB5 142 aa13.24□□□□□ -0.29
PBRM1-212ENST00000424867 KIAA1468Q9P260 1216 aa13.24□□□□□ -0.29
PBRM1-212ENST00000424867 MFSD10Q14728 455 aa13.23□□□□□ -0.29
PBRM1-212ENST00000424867 TYW1BQ6NUM6 668 aa13.23□□□□□ -0.29
PBRM1-212ENST00000424867 FBXW7Q969H0 707 aa13.23□□□□□ -0.29
PBRM1-212ENST00000424867 GTPBP6O43824 516 aaPredicted RBP13.22□□□□□ -0.29
PBRM1-212ENST00000424867 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
PBRM1-212ENST00000424867 ZFRQ96KR1 1074 aaKnown RBP13.22□□□□□ -0.29
PBRM1-212ENST00000424867 PHF14O94880 888 aa13.2□□□□□ -0.3
PBRM1-212ENST00000424867 KCNC4Q03721 635 aa13.2□□□□□ -0.3
PBRM1-212ENST00000424867 WBP1LQ9NX94 342 aa13.2□□□□□ -0.3
PBRM1-212ENST00000424867 ONECUT3O60422 494 aaPredicted RBP13.16□□□□□ -0.3
PBRM1-212ENST00000424867 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
PBRM1-212ENST00000424867 C6orf132Q5T0Z8 1188 aa13.14□□□□□ -0.31
PBRM1-212ENST00000424867 EPAS1Q99814 870 aa13.12□□□□□ -0.31
PBRM1-212ENST00000424867 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
PBRM1-212ENST00000424867 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
PBRM1-212ENST00000424867 TSR3Q9UJK0 312 aaKnown RBP13.1□□□□□ -0.31
PBRM1-212ENST00000424867 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.09□□□□□ -0.31
PBRM1-212ENST00000424867 HPS5Q9UPZ3 1129 aa13.09□□□□□ -0.31
PBRM1-212ENST00000424867 LRCH3Q96II8 777 aa13.08□□□□□ -0.32
PBRM1-212ENST00000424867 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
PBRM1-212ENST00000424867 LAPTM4AQ15012 233 aa13.06□□□□□ -0.32
PBRM1-212ENST00000424867 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
PBRM1-212ENST00000424867 DPYSL4O14531 572 aa13.03□□□□□ -0.32
PBRM1-212ENST00000424867 GFRA3O60609 400 aa13.02□□□□□ -0.33
PBRM1-212ENST00000424867 CAMK2BQ13554 666 aa13□□□□□ -0.33
PBRM1-212ENST00000424867 TRAF7Q6Q0C0 670 aa13□□□□□ -0.33
PBRM1-212ENST00000424867 DDX12PQ92771 950 aa13□□□□□ -0.33
PBRM1-212ENST00000424867 PACS2Q86VP3 889 aa12.99□□□□□ -0.33
PBRM1-212ENST00000424867 LCE2BO14633 110 aa12.98□□□□□ -0.33
PBRM1-212ENST00000424867 PPP4CP60510 307 aa12.98□□□□□ -0.33
PBRM1-212ENST00000424867 TSKSQ9UJT2 592 aa12.96□□□□□ -0.33
PBRM1-212ENST00000424867 TJAP1Q5JTD0 557 aa12.94□□□□□ -0.34
PBRM1-212ENST00000424867 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
PBRM1-212ENST00000424867 PRKD2Q9BZL6 878 aa12.93□□□□□ -0.34
PBRM1-212ENST00000424867 MAP3K7O43318 606 aa12.91□□□□□ -0.34
PBRM1-212ENST00000424867 EN1Q05925 392 aaPredicted RBP12.91□□□□□ -0.34
PBRM1-212ENST00000424867 NBR1Q14596 966 aa12.91□□□□□ -0.34
PBRM1-212ENST00000424867 TSR1Q2NL82 804 aaKnown RBP12.91□□□□□ -0.34
PBRM1-212ENST00000424867 SAMD7Q7Z3H4 446 aa12.9□□□□□ -0.34
PBRM1-212ENST00000424867 SMAPO00193 183 aa12.88□□□□□ -0.35
PBRM1-212ENST00000424867 NRG2O14511 850 aaPredicted RBP12.88□□□□□ -0.35
PBRM1-212ENST00000424867 MTRQ99707 1265 aa12.87□□□□□ -0.35
PBRM1-212ENST00000424867 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
PBRM1-212ENST00000424867 CDCA7LQ96GN5 454 aa12.86□□□□□ -0.35
PBRM1-212ENST00000424867 IL21Q9HBE4 155 aa12.86□□□□□ -0.35
PBRM1-212ENST00000424867 V9GY48 417 aaPredicted RBP12.84□□□□□ -0.35
PBRM1-212ENST00000424867 PRSS12P56730 875 aa12.83□□□□□ -0.36
PBRM1-212ENST00000424867 FAM198AQ9UFP1 575 aa12.82□□□□□ -0.36
PBRM1-212ENST00000424867 ZNF516Q92618 1163 aa12.81□□□□□ -0.36
PBRM1-212ENST00000424867 PDIA6Q15084 440 aa12.8□□□□□ -0.36
PBRM1-212ENST00000424867 TATDN2Q93075 761 aa12.8□□□□□ -0.36
PBRM1-212ENST00000424867 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.8□□□□□ -0.36
PBRM1-212ENST00000424867 C3orf80F5H4A9 247 aa12.79□□□□□ -0.36
PBRM1-212ENST00000424867 PNMA3Q9UL41 463 aa12.78□□□□□ -0.36
PBRM1-212ENST00000424867 SPDYE16A6NNV3 312 aaPredicted RBP12.77□□□□□ -0.37
PBRM1-212ENST00000424867 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
PBRM1-212ENST00000424867 CERKQ8TCT0 537 aa12.77□□□□□ -0.37
PBRM1-212ENST00000424867 RNF40O75150 1001 aa12.76□□□□□ -0.37
PBRM1-212ENST00000424867 HDGFP51858 240 aaKnown RBP12.76□□□□□ -0.37
PBRM1-212ENST00000424867 ZNF787Q6DD87 383 aa12.76□□□□□ -0.37
PBRM1-212ENST00000424867 PDZRN3Q9UPQ7 1066 aa12.76□□□□□ -0.37
PBRM1-212ENST00000424867 APLP1P51693 650 aa12.74□□□□□ -0.37
PBRM1-212ENST00000424867 NKX2-3Q8TAU0 364 aa12.74□□□□□ -0.37
PBRM1-212ENST00000424867 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
PBRM1-212ENST00000424867 GRXCR2A6NFK2 248 aa12.71□□□□□ -0.37
PBRM1-212ENST00000424867 NUDT18Q6ZVK8 323 aa12.71□□□□□ -0.37
PBRM1-212ENST00000424867 GGCXP38435 758 aa12.69□□□□□ -0.38
PBRM1-212ENST00000424867 COPS2P61201 443 aa12.67□□□□□ -0.38
PBRM1-212ENST00000424867 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
PBRM1-212ENST00000424867 CDHR5Q9HBB8 845 aa12.64□□□□□ -0.39
PBRM1-212ENST00000424867 ZNF775Q96BV0 537 aaPredicted RBP12.63□□□□□ -0.39
PBRM1-212ENST00000424867 TMUB1Q9BVT8 246 aa12.63□□□□□ -0.39
PBRM1-212ENST00000424867 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
PBRM1-212ENST00000424867 OSBPP22059 807 aa12.62□□□□□ -0.39
PBRM1-212ENST00000424867 E2F4Q16254 413 aa12.62□□□□□ -0.39
PBRM1-212ENST00000424867 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
PBRM1-212ENST00000424867 SLF2Q8IX21 1173 aa12.61□□□□□ -0.39
PBRM1-212ENST00000424867 ZPR1O75312 459 aa12.59□□□□□ -0.39
PBRM1-212ENST00000424867 ARIH1Q9Y4X5 557 aaPredicted RBP12.57□□□□□ -0.4
PBRM1-212ENST00000424867 SLC4A3P48751 1232 aa12.56□□□□□ -0.4
PBRM1-212ENST00000424867 TTC13Q8NBP0 860 aa12.56□□□□□ -0.4
PBRM1-212ENST00000424867 BBXQ8WY36 941 aaPredicted RBP12.56□□□□□ -0.4
PBRM1-212ENST00000424867 SLC19A1P41440 591 aa12.55□□□□□ -0.4
PBRM1-212ENST00000424867 PADI6Q6TGC4 694 aa12.55□□□□□ -0.4
PBRM1-212ENST00000424867 TRIM67Q6ZTA4 783 aa12.55□□□□□ -0.4
PBRM1-212ENST00000424867 NPDC1Q9NQX5 325 aaPredicted RBP12.53□□□□□ -0.4
PBRM1-212ENST00000424867 RNF223E7ERA6 249 aa12.52□□□□□ -0.41
PBRM1-212ENST00000424867 WDR70Q9NW82 654 aa12.52□□□□□ -0.41
PBRM1-212ENST00000424867 PCDHB3Q9Y5E6 796 aa12.52□□□□□ -0.41
PBRM1-212ENST00000424867 PKDCCQ504Y2 493 aa12.51□□□□□ -0.41
PBRM1-212ENST00000424867 PRR14Q9BWN1 585 aa12.51□□□□□ -0.41
PBRM1-212ENST00000424867 MYT1Q01538 1121 aa12.49□□□□□ -0.41
PBRM1-212ENST00000424867 EMID1Q96A84 441 aaPredicted RBP12.49□□□□□ -0.41
PBRM1-212ENST00000424867 EYA1Q99502 592 aa12.49□□□□□ -0.41
PBRM1-212ENST00000424867 DGAT1O75907 488 aa12.48□□□□□ -0.41
PBRM1-212ENST00000424867 BLOC1S3Q6QNY0 202 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms