RNA–Protein interactions for RNA: ENST00000424022.2

LBR-204, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-204ENST00000424022 KRI1Q8N9T8 703 aaKnown RBP12.07□□□□□ -0.48
LBR-204ENST00000424022 TYW1BQ6NUM6 668 aa12.06□□□□□ -0.48
LBR-204ENST00000424022 GNPATO15228 680 aa12.04□□□□□ -0.48
LBR-204ENST00000424022 PLSCR2Q9NRY7 297 aa12.04□□□□□ -0.48
LBR-204ENST00000424022 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
LBR-204ENST00000424022 PCDHGA10Q9Y5H3 936 aa12.04□□□□□ -0.48
LBR-204ENST00000424022 ABCC9O60706 1549 aa12.04□□□□□ -0.48
LBR-204ENST00000424022 FOSBP53539 338 aa12.03□□□□□ -0.48
LBR-204ENST00000424022 MINK1Q8N4C8 1332 aaPredicted RBP12.03□□□□□ -0.48
LBR-204ENST00000424022 CCDC180Q9P1Z9 1646 aa12.03□□□□□ -0.48
LBR-204ENST00000424022 MAP2K5Q13163 448 aa12.02□□□□□ -0.49
LBR-204ENST00000424022 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
LBR-204ENST00000424022 MAP3K7O43318 606 aa12.01□□□□□ -0.49
LBR-204ENST00000424022 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
LBR-204ENST00000424022 PTGDRQ13258 359 aa12.01□□□□□ -0.49
LBR-204ENST00000424022 KRTAP3-3Q9BYR6 98 aa12□□□□□ -0.49
LBR-204ENST00000424022 KRTAP3-2Q9BYR7 98 aa12□□□□□ -0.49
LBR-204ENST00000424022 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
LBR-204ENST00000424022 ZNF687Q8N1G0 1237 aa11.98□□□□□ -0.49
LBR-204ENST00000424022 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
LBR-204ENST00000424022 ZDHHC16Q969W1 377 aa11.98□□□□□ -0.49
LBR-204ENST00000424022 TMEM132AQ24JP5 1023 aa11.97□□□□□ -0.49
LBR-204ENST00000424022 ZNF454Q8N9F8 522 aa11.97□□□□□ -0.49
LBR-204ENST00000424022 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
LBR-204ENST00000424022 IRF6O14896 467 aa11.95□□□□□ -0.5
LBR-204ENST00000424022 DAXXQ9UER7 740 aaPredicted RBP11.95□□□□□ -0.5
LBR-204ENST00000424022 TRIM66O15016 1216 aa11.94□□□□□ -0.5
LBR-204ENST00000424022 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
LBR-204ENST00000424022 CDHR5Q9HBB8 845 aa11.93□□□□□ -0.5
LBR-204ENST00000424022 NPDC1Q9NQX5 325 aaPredicted RBP11.93□□□□□ -0.5
LBR-204ENST00000424022 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
LBR-204ENST00000424022 CCDC102AQ96A19 550 aa11.92□□□□□ -0.5
LBR-204ENST00000424022 C6orf132Q5T0Z8 1188 aa11.91□□□□□ -0.5
LBR-204ENST00000424022 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
LBR-204ENST00000424022 TSR1Q2NL82 804 aaKnown RBP11.9□□□□□ -0.5
LBR-204ENST00000424022 PDE4DQ08499 809 aa11.89□□□□□ -0.51
LBR-204ENST00000424022 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
LBR-204ENST00000424022 AMHR2Q16671 573 aa11.88□□□□□ -0.51
LBR-204ENST00000424022 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
LBR-204ENST00000424022 ADAM33Q9BZ11 813 aa11.88□□□□□ -0.51
LBR-204ENST00000424022 AXIN2Q9Y2T1 843 aa11.88□□□□□ -0.51
LBR-204ENST00000424022 FECHP22830 423 aa11.87□□□□□ -0.51
LBR-204ENST00000424022 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
LBR-204ENST00000424022 PTPREP23469 700 aa11.82□□□□□ -0.52
LBR-204ENST00000424022 ANKRD13DQ6ZTN6 518 aa11.82□□□□□ -0.52
LBR-204ENST00000424022 PBX2P40425 430 aa11.81□□□□□ -0.52
LBR-204ENST00000424022 TTC13Q8NBP0 860 aa11.81□□□□□ -0.52
LBR-204ENST00000424022 KDM4CQ9H3R0 1056 aa11.81□□□□□ -0.52
LBR-204ENST00000424022 PPP1R3GB7ZBB8 358 aa11.8□□□□□ -0.52
LBR-204ENST00000424022 OATP04181 439 aa11.8□□□□□ -0.52
LBR-204ENST00000424022 PRSS12P56730 875 aa11.8□□□□□ -0.52
LBR-204ENST00000424022 LSM11P83369 360 aaKnown RBP eCLIP11.8□□□□□ -0.52
LBR-204ENST00000424022 ARHGAP33O14559 1287 aa11.79□□□□□ -0.52
LBR-204ENST00000424022 MMRN1Q13201 1228 aa11.79□□□□□ -0.52
LBR-204ENST00000424022 KCNH8Q96L42 1107 aa11.79□□□□□ -0.52
LBR-204ENST00000424022 GPBP1L1Q9HC44 474 aaPredicted RBP11.79□□□□□ -0.52
LBR-204ENST00000424022 PSEN2P49810 448 aa11.78□□□□□ -0.52
LBR-204ENST00000424022 PADI6Q6TGC4 694 aa11.78□□□□□ -0.52
LBR-204ENST00000424022 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
LBR-204ENST00000424022 PARP9Q8IXQ6 854 aa11.76□□□□□ -0.53
LBR-204ENST00000424022 CLCN1P35523 988 aa11.75□□□□□ -0.53
LBR-204ENST00000424022 DMRTA1Q5VZB9 504 aa11.75□□□□□ -0.53
LBR-204ENST00000424022 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
LBR-204ENST00000424022 ONECUT3O60422 494 aaPredicted RBP11.74□□□□□ -0.53
LBR-204ENST00000424022 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
LBR-204ENST00000424022 DDRGK1Q96HY6 314 aa11.74□□□□□ -0.53
LBR-204ENST00000424022 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
LBR-204ENST00000424022 METTL3Q86U44 580 aaKnown RBP11.73□□□□□ -0.53
LBR-204ENST00000424022 RBM46Q8TBY0 533 aaKnown RBP11.73□□□□□ -0.53
LBR-204ENST00000424022 COL9A1P20849 921 aa11.72□□□□□ -0.53
LBR-204ENST00000424022 PXYLP1Q8TE99 480 aa11.72□□□□□ -0.53
LBR-204ENST00000424022 GPCPD1Q9NPB8 672 aa11.71□□□□□ -0.53
LBR-204ENST00000424022 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
LBR-204ENST00000424022 GTF3C3Q9Y5Q9 886 aa11.7□□□□□ -0.54
LBR-204ENST00000424022 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
LBR-204ENST00000424022 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
LBR-204ENST00000424022 GIGYF2Q6Y7W6 1299 aaKnown RBP11.69□□□□□ -0.54
LBR-204ENST00000424022 ADGRD1Q6QNK2 874 aa11.68□□□□□ -0.54
LBR-204ENST00000424022 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
LBR-204ENST00000424022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.67□□□□□ -0.54
LBR-204ENST00000424022 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
LBR-204ENST00000424022 MDM2Q00987 491 aaPredicted RBP11.66□□□□□ -0.54
LBR-204ENST00000424022 IL27Q8NEV9 243 aa11.66□□□□□ -0.54
LBR-204ENST00000424022 PHOX2BQ99453 314 aa11.66□□□□□ -0.54
LBR-204ENST00000424022 SLC4A5Q9BY07 1137 aa11.66□□□□□ -0.54
LBR-204ENST00000424022 TSKSQ9UJT2 592 aa11.66□□□□□ -0.54
LBR-204ENST00000424022 MYT1LQ9UL68 1186 aa11.66□□□□□ -0.54
LBR-204ENST00000424022 FAM117AQ9C073 453 aa11.65□□□□□ -0.54
LBR-204ENST00000424022 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
LBR-204ENST00000424022 TK2O00142 265 aa11.64□□□□□ -0.55
LBR-204ENST00000424022 FAM161AQ3B820 660 aa11.64□□□□□ -0.55
LBR-204ENST00000424022 EYA1Q99502 592 aa11.64□□□□□ -0.55
LBR-204ENST00000424022 ZBED2Q9BTP6 218 aa11.63□□□□□ -0.55
LBR-204ENST00000424022 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
LBR-204ENST00000424022 TATDN2Q93075 761 aa11.62□□□□□ -0.55
LBR-204ENST00000424022 RNF166Q96A37 237 aaPredicted RBP11.62□□□□□ -0.55
LBR-204ENST00000424022 GOPCQ9HD26 462 aa11.62□□□□□ -0.55
LBR-204ENST00000424022 HRO43593 1189 aa11.61□□□□□ -0.55
LBR-204ENST00000424022 MS4A1P11836 297 aa11.61□□□□□ -0.55
LBR-204ENST00000424022 DNAJB2P25686 324 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms