RNA–Protein interactions for RNA: ENST00000424017.1

AP000235.1-201, humanhuman

TSL 3 BASIC

Gene AP000235.1, Length 479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000235.1-201ENST00000424017 COL9A1P20849 921 aa6.72□□□□□ -1.33
AP000235.1-201ENST00000424017 LAPTM4BQ86VI4 370 aa6.72□□□□□ -1.33
AP000235.1-201ENST00000424017 KIAA1468Q9P260 1216 aa6.72□□□□□ -1.33
AP000235.1-201ENST00000424017 PHF14O94880 888 aa6.71□□□□□ -1.34
AP000235.1-201ENST00000424017 MFSD10Q14728 455 aa6.71□□□□□ -1.34
AP000235.1-201ENST00000424017 EMILIN3Q9NT22 766 aa6.71□□□□□ -1.34
AP000235.1-201ENST00000424017 SOWAHBA6NEL2 793 aa6.7□□□□□ -1.34
AP000235.1-201ENST00000424017 Q6ZNB5 142 aa6.7□□□□□ -1.34
AP000235.1-201ENST00000424017 NYAP1Q6ZVC0 841 aa6.7□□□□□ -1.34
AP000235.1-201ENST00000424017 ZFRQ96KR1 1074 aaKnown RBP6.7□□□□□ -1.34
AP000235.1-201ENST00000424017 KCNC4Q03721 635 aa6.69□□□□□ -1.34
AP000235.1-201ENST00000424017 RBM33Q96EV2 1170 aaKnown RBP6.69□□□□□ -1.34
AP000235.1-201ENST00000424017 EPAS1Q99814 870 aa6.69□□□□□ -1.34
AP000235.1-201ENST00000424017 SEPT9Q9UHD8 586 aaPredicted RBP6.69□□□□□ -1.34
AP000235.1-201ENST00000424017 ITGBL1O95965 494 aaPredicted RBP6.68□□□□□ -1.34
AP000235.1-201ENST00000424017 C6orf132Q5T0Z8 1188 aa6.68□□□□□ -1.34
AP000235.1-201ENST00000424017 WBP1LQ9NX94 342 aa6.68□□□□□ -1.34
AP000235.1-201ENST00000424017 LRCH3Q96II8 777 aa6.67□□□□□ -1.34
AP000235.1-201ENST00000424017 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.67□□□□□ -1.34
AP000235.1-201ENST00000424017 ONECUT3O60422 494 aaPredicted RBP6.66□□□□□ -1.34
AP000235.1-201ENST00000424017 HPS5Q9UPZ3 1129 aa6.66□□□□□ -1.34
AP000235.1-201ENST00000424017 TRIM6-TRIM34B2RNG4 842 aa6.65□□□□□ -1.34
AP000235.1-201ENST00000424017 DPYSL4O14531 572 aa6.65□□□□□ -1.34
AP000235.1-201ENST00000424017 FAM98CQ17RN3 349 aaKnown RBP6.65□□□□□ -1.34
AP000235.1-201ENST00000424017 DDX12PQ92771 950 aa6.65□□□□□ -1.34
AP000235.1-201ENST00000424017 TSR3Q9UJK0 312 aaKnown RBP6.65□□□□□ -1.34
AP000235.1-201ENST00000424017 CADPS2Q86UW7 1296 aa6.64□□□□□ -1.35
AP000235.1-201ENST00000424017 PACS2Q86VP3 889 aa6.64□□□□□ -1.35
AP000235.1-201ENST00000424017 MAP3K7O43318 606 aa6.62□□□□□ -1.35
AP000235.1-201ENST00000424017 PPP4CP60510 307 aa6.62□□□□□ -1.35
AP000235.1-201ENST00000424017 NBR1Q14596 966 aa6.61□□□□□ -1.35
AP000235.1-201ENST00000424017 LAPTM4AQ15012 233 aa6.61□□□□□ -1.35
AP000235.1-201ENST00000424017 GFRA3O60609 400 aa6.59□□□□□ -1.35
AP000235.1-201ENST00000424017 HDGFP51858 240 aaKnown RBP6.59□□□□□ -1.35
AP000235.1-201ENST00000424017 CAMK2BQ13554 666 aa6.59□□□□□ -1.35
AP000235.1-201ENST00000424017 RNF40O75150 1001 aa6.58□□□□□ -1.36
AP000235.1-201ENST00000424017 EN1Q05925 392 aaPredicted RBP6.56□□□□□ -1.36
AP000235.1-201ENST00000424017 TSR1Q2NL82 804 aaKnown RBP6.56□□□□□ -1.36
AP000235.1-201ENST00000424017 TSKSQ9UJT2 592 aa6.56□□□□□ -1.36
AP000235.1-201ENST00000424017 SMAPO00193 183 aa6.55□□□□□ -1.36
AP000235.1-201ENST00000424017 TRAF7Q6Q0C0 670 aa6.55□□□□□ -1.36
AP000235.1-201ENST00000424017 SAMD7Q7Z3H4 446 aa6.55□□□□□ -1.36
AP000235.1-201ENST00000424017 PRKD2Q9BZL6 878 aa6.55□□□□□ -1.36
AP000235.1-201ENST00000424017 SPDYE16A6NNV3 312 aaPredicted RBP6.54□□□□□ -1.36
AP000235.1-201ENST00000424017 CDCA7LQ96GN5 454 aa6.54□□□□□ -1.36
AP000235.1-201ENST00000424017 GRXCR2A6NFK2 248 aa6.53□□□□□ -1.36
AP000235.1-201ENST00000424017 NBPF26B4DH59 902 aa6.53□□□□□ -1.36
AP000235.1-201ENST00000424017 PRSS12P56730 875 aa6.53□□□□□ -1.36
AP000235.1-201ENST00000424017 CERKQ8TCT0 537 aa6.53□□□□□ -1.36
AP000235.1-201ENST00000424017 IL21Q9HBE4 155 aa6.53□□□□□ -1.36
AP000235.1-201ENST00000424017 PNMA3Q9UL41 463 aa6.53□□□□□ -1.36
AP000235.1-201ENST00000424017 PDIA6Q15084 440 aa6.52□□□□□ -1.37
AP000235.1-201ENST00000424017 TJAP1Q5JTD0 557 aa6.52□□□□□ -1.37
AP000235.1-201ENST00000424017 MTRQ99707 1265 aa6.52□□□□□ -1.37
AP000235.1-201ENST00000424017 WDR70Q9NW82 654 aa6.52□□□□□ -1.37
AP000235.1-201ENST00000424017 PPP1R18Q6NYC8 613 aa6.51□□□□□ -1.37
AP000235.1-201ENST00000424017 TATDN2Q93075 761 aa6.51□□□□□ -1.37
AP000235.1-201ENST00000424017 NRG2O14511 850 aaPredicted RBP6.5□□□□□ -1.37
AP000235.1-201ENST00000424017 GGCXP38435 758 aa6.5□□□□□ -1.37
AP000235.1-201ENST00000424017 SLC4A3P48751 1232 aa6.5□□□□□ -1.37
AP000235.1-201ENST00000424017 BBXQ8WY36 941 aaPredicted RBP6.49□□□□□ -1.37
AP000235.1-201ENST00000424017 NECTIN2Q92692 538 aa6.49□□□□□ -1.37
AP000235.1-201ENST00000424017 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.49□□□□□ -1.37
AP000235.1-201ENST00000424017 E2F4Q16254 413 aa6.48□□□□□ -1.37
AP000235.1-201ENST00000424017 NUDT18Q6ZVK8 323 aa6.48□□□□□ -1.37
AP000235.1-201ENST00000424017 ZNF516Q92618 1163 aa6.48□□□□□ -1.37
AP000235.1-201ENST00000424017 V9GY48 417 aaPredicted RBP6.48□□□□□ -1.37
AP000235.1-201ENST00000424017 SPRYD3Q8NCJ5 442 aa6.47□□□□□ -1.37
AP000235.1-201ENST00000424017 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.47□□□□□ -1.37
AP000235.1-201ENST00000424017 PDZRN3Q9UPQ7 1066 aa6.47□□□□□ -1.37
AP000235.1-201ENST00000424017 COPS2P61201 443 aa6.46□□□□□ -1.38
AP000235.1-201ENST00000424017 FAM198AQ9UFP1 575 aa6.46□□□□□ -1.38
AP000235.1-201ENST00000424017 APLP1P51693 650 aa6.45□□□□□ -1.38
AP000235.1-201ENST00000424017 ZNF787Q6DD87 383 aa6.45□□□□□ -1.38
AP000235.1-201ENST00000424017 SLF2Q8IX21 1173 aa6.45□□□□□ -1.38
AP000235.1-201ENST00000424017 NKX2-3Q8TAU0 364 aa6.44□□□□□ -1.38
AP000235.1-201ENST00000424017 C3orf80F5H4A9 247 aa6.43□□□□□ -1.38
AP000235.1-201ENST00000424017 CDHR5Q9HBB8 845 aa6.43□□□□□ -1.38
AP000235.1-201ENST00000424017 LCE2BO14633 110 aa6.42□□□□□ -1.38
AP000235.1-201ENST00000424017 PRIM1P49642 420 aaKnown RBP6.42□□□□□ -1.38
AP000235.1-201ENST00000424017 SWT1Q5T5J6 900 aaKnown RBP6.42□□□□□ -1.38
AP000235.1-201ENST00000424017 CFAP44Q96MT7 982 aa6.42□□□□□ -1.38
AP000235.1-201ENST00000424017 OSBPP22059 807 aa6.41□□□□□ -1.38
AP000235.1-201ENST00000424017 PADI6Q6TGC4 694 aa6.41□□□□□ -1.38
AP000235.1-201ENST00000424017 PRR14Q9BWN1 585 aa6.41□□□□□ -1.38
AP000235.1-201ENST00000424017 RBM27Q9P2N5 1060 aaKnown RBP6.41□□□□□ -1.38
AP000235.1-201ENST00000424017 TMUB1Q9BVT8 246 aa6.4□□□□□ -1.38
AP000235.1-201ENST00000424017 PCDHB3Q9Y5E6 796 aa6.4□□□□□ -1.38
AP000235.1-201ENST00000424017 ZPR1O75312 459 aa6.39□□□□□ -1.39
AP000235.1-201ENST00000424017 SLC19A1P41440 591 aa6.38□□□□□ -1.39
AP000235.1-201ENST00000424017 PKDCCQ504Y2 493 aa6.38□□□□□ -1.39
AP000235.1-201ENST00000424017 PAXIP1Q6ZW49 1069 aaPredicted RBP6.38□□□□□ -1.39
AP000235.1-201ENST00000424017 ARIH1Q9Y4X5 557 aaPredicted RBP6.37□□□□□ -1.39
AP000235.1-201ENST00000424017 RNF223E7ERA6 249 aa6.34□□□□□ -1.39
AP000235.1-201ENST00000424017 KMT5BQ4FZB7 885 aa6.34□□□□□ -1.39
AP000235.1-201ENST00000424017 BLOC1S3Q6QNY0 202 aa6.34□□□□□ -1.39
AP000235.1-201ENST00000424017 TTC13Q8NBP0 860 aa6.34□□□□□ -1.39
AP000235.1-201ENST00000424017 ZNF775Q96BV0 537 aaPredicted RBP6.34□□□□□ -1.39
AP000235.1-201ENST00000424017 NPDC1Q9NQX5 325 aaPredicted RBP6.34□□□□□ -1.39
AP000235.1-201ENST00000424017 RBM46Q8TBY0 533 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms