RNA–Protein interactions for RNA: ENST00000423927.2

KNTC1-203, Transcript of kinetochore associated 1, humanhuman

TSL 4

Gene KNTC1, Length 1,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-203ENST00000423927 RNF17Q9BXT8 1623 aaKnown RBP13.78□□□□□ -0.2
KNTC1-203ENST00000423927 ABCC1P33527 1531 aa13.77□□□□□ -0.21
KNTC1-203ENST00000423927 GGT6Q6P531 493 aa13.76□□□□□ -0.21
KNTC1-203ENST00000423927 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
KNTC1-203ENST00000423927 TROQ12816 1431 aaPredicted RBP13.75□□□□□ -0.21
KNTC1-203ENST00000423927 PREX2Q70Z35 1606 aa13.75□□□□□ -0.21
KNTC1-203ENST00000423927 THEMISQ8N1K5 641 aaPredicted RBP13.73□□□□□ -0.21
KNTC1-203ENST00000423927 SYNMO15061 1565 aa13.73□□□□□ -0.21
KNTC1-203ENST00000423927 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
KNTC1-203ENST00000423927 SPAG9O60271 1321 aaKnown RBP13.72□□□□□ -0.21
KNTC1-203ENST00000423927 LRRC7Q96NW7 1537 aa13.72□□□□□ -0.21
KNTC1-203ENST00000423927 IQGAP1P46940 1657 aa13.72□□□□□ -0.21
KNTC1-203ENST00000423927 NPHP4O75161 1426 aaPredicted RBP13.72□□□□□ -0.21
KNTC1-203ENST00000423927 DEPDC5O75140 1603 aa13.72□□□□□ -0.21
KNTC1-203ENST00000423927 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.21
KNTC1-203ENST00000423927 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.21
KNTC1-203ENST00000423927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.7□□□□□ -0.22
KNTC1-203ENST00000423927 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
KNTC1-203ENST00000423927 CDC42BPAQ5VT25 1732 aa13.69□□□□□ -0.22
KNTC1-203ENST00000423927 TNRQ92752 1358 aa13.69□□□□□ -0.22
KNTC1-203ENST00000423927 MED14O60244 1454 aa13.68□□□□□ -0.22
KNTC1-203ENST00000423927 A2MP01023 1474 aa13.68□□□□□ -0.22
KNTC1-203ENST00000423927 ZNF777Q9ULD5 760 aaPredicted RBP13.67□□□□□ -0.22
KNTC1-203ENST00000423927 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
KNTC1-203ENST00000423927 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
KNTC1-203ENST00000423927 ATP7AQ04656 1500 aa13.66□□□□□ -0.22
KNTC1-203ENST00000423927 FAM135AQ9P2D6 1515 aa13.66□□□□□ -0.22
KNTC1-203ENST00000423927 UGGT1Q9NYU2 1555 aa13.65□□□□□ -0.22
KNTC1-203ENST00000423927 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
KNTC1-203ENST00000423927 XIRP1Q702N8 1843 aaKnown RBP13.64□□□□□ -0.23
KNTC1-203ENST00000423927 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
KNTC1-203ENST00000423927 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
KNTC1-203ENST00000423927 FBXO31Q5XUX0 539 aaPredicted RBP13.63□□□□□ -0.23
KNTC1-203ENST00000423927 SYCP2Q9BX26 1530 aa13.62□□□□□ -0.23
KNTC1-203ENST00000423927 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
KNTC1-203ENST00000423927 TRIM52Q96A61 297 aa13.61□□□□□ -0.23
KNTC1-203ENST00000423927 INO80Q9ULG1 1556 aaPredicted RBP13.61□□□□□ -0.23
KNTC1-203ENST00000423927 ROBO1Q9Y6N7 1651 aa13.59□□□□□ -0.23
KNTC1-203ENST00000423927 ZNF772Q68DY9 489 aaPredicted RBP13.59□□□□□ -0.23
KNTC1-203ENST00000423927 PZPP20742 1482 aa13.59□□□□□ -0.23
KNTC1-203ENST00000423927 MIA2Q96PC5 1412 aa13.58□□□□□ -0.24
KNTC1-203ENST00000423927 CFAP65Q6ZU64 1925 aaKnown RBP13.58□□□□□ -0.24
KNTC1-203ENST00000423927 PHLPP1O60346 1717 aa13.57□□□□□ -0.24
KNTC1-203ENST00000423927 ZC3H13Q5T200 1668 aaKnown RBP13.56□□□□□ -0.24
KNTC1-203ENST00000423927 EEA1Q15075 1411 aa13.56□□□□□ -0.24
KNTC1-203ENST00000423927 PLEKHH2Q8IVE3 1493 aa13.56□□□□□ -0.24
KNTC1-203ENST00000423927 MEX3CQ5U5Q3 659 aaKnown RBP13.56□□□□□ -0.24
KNTC1-203ENST00000423927 WASHC2CQ9Y4E1 1318 aa13.56□□□□□ -0.24
KNTC1-203ENST00000423927 JCADQ9P266 1359 aa13.55□□□□□ -0.24
KNTC1-203ENST00000423927 KDM5DQ9BY66 1539 aa13.54□□□□□ -0.24
KNTC1-203ENST00000423927 RXRBP28702 533 aa13.54□□□□□ -0.24
KNTC1-203ENST00000423927 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
KNTC1-203ENST00000423927 KIF3BO15066 747 aa13.53□□□□□ -0.24
KNTC1-203ENST00000423927 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
KNTC1-203ENST00000423927 LRRC9Q6ZRR7 1453 aa13.52□□□□□ -0.25
KNTC1-203ENST00000423927 CFDP1Q9UEE9 299 aaPredicted RBP13.51□□□□□ -0.25
KNTC1-203ENST00000423927 DHX29Q7Z478 1369 aaKnown RBP13.5□□□□□ -0.25
KNTC1-203ENST00000423927 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
KNTC1-203ENST00000423927 GPATCH8Q9UKJ3 1502 aaKnown RBP13.49□□□□□ -0.25
KNTC1-203ENST00000423927 ARHGAP35Q9NRY4 1499 aa13.49□□□□□ -0.25
KNTC1-203ENST00000423927 SCAF11Q99590 1463 aaKnown RBP13.48□□□□□ -0.25
KNTC1-203ENST00000423927 SPATA31A6Q5VVP1 1343 aa13.48□□□□□ -0.25
KNTC1-203ENST00000423927 TXNDC2Q86VQ3 553 aa13.48□□□□□ -0.25
KNTC1-203ENST00000423927 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
KNTC1-203ENST00000423927 UBR1Q8IWV7 1749 aa13.47□□□□□ -0.25
KNTC1-203ENST00000423927 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
KNTC1-203ENST00000423927 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
KNTC1-203ENST00000423927 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
KNTC1-203ENST00000423927 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
KNTC1-203ENST00000423927 TMEM94Q12767 1356 aa13.46□□□□□ -0.25
KNTC1-203ENST00000423927 ABCB7O75027 752 aa13.45□□□□□ -0.26
KNTC1-203ENST00000423927 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
KNTC1-203ENST00000423927 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
KNTC1-203ENST00000423927 SLAIN2Q9P270 581 aa13.44□□□□□ -0.26
KNTC1-203ENST00000423927 APLP2Q06481 763 aa13.43□□□□□ -0.26
KNTC1-203ENST00000423927 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
KNTC1-203ENST00000423927 MSH6P52701 1360 aa13.43□□□□□ -0.26
KNTC1-203ENST00000423927 FGD6Q6ZV73 1430 aa13.42□□□□□ -0.26
KNTC1-203ENST00000423927 NUTM2BA6NNL0 878 aaPredicted RBP13.42□□□□□ -0.26
KNTC1-203ENST00000423927 NUTM2EB1AL46 878 aaPredicted RBP13.42□□□□□ -0.26
KNTC1-203ENST00000423927 KCNA6P17658 529 aa13.42□□□□□ -0.26
KNTC1-203ENST00000423927 LTKP29376 864 aa13.42□□□□□ -0.26
KNTC1-203ENST00000423927 NUTM2DQ5VT03 806 aaPredicted RBP13.42□□□□□ -0.26
KNTC1-203ENST00000423927 NUTM2AQ8IVF1 878 aaPredicted RBP13.42□□□□□ -0.26
KNTC1-203ENST00000423927 LRP6O75581 1613 aa13.42□□□□□ -0.26
KNTC1-203ENST00000423927 CASKIN1Q8WXD9 1431 aa13.41□□□□□ -0.26
KNTC1-203ENST00000423927 COL16A1Q07092 1604 aaPredicted RBP13.41□□□□□ -0.26
KNTC1-203ENST00000423927 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
KNTC1-203ENST00000423927 SLIT1O75093 1534 aa13.39□□□□□ -0.27
KNTC1-203ENST00000423927 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
KNTC1-203ENST00000423927 RBM33Q96EV2 1170 aaKnown RBP13.39□□□□□ -0.27
KNTC1-203ENST00000423927 ERVK-7P63135 1459 aa13.38□□□□□ -0.27
KNTC1-203ENST00000423927 ARHGAP23Q9P227 1491 aa13.38□□□□□ -0.27
KNTC1-203ENST00000423927 PRDM15P57071 1507 aaPredicted RBP13.37□□□□□ -0.27
KNTC1-203ENST00000423927 TIAM1Q13009 1591 aa13.37□□□□□ -0.27
KNTC1-203ENST00000423927 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
KNTC1-203ENST00000423927 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
KNTC1-203ENST00000423927 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
KNTC1-203ENST00000423927 AFF2P51816 1311 aa13.36□□□□□ -0.27
KNTC1-203ENST00000423927 ZNF644Q9H582 1327 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms