RNA–Protein interactions for RNA: ENST00000423035.5

PGAP1-206, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 1 (best)

Gene PGAP1, Length 8,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-206ENST00000423035 CASC1Q6TDU7 716 aa5.56□□□□□ -1.52
PGAP1-206ENST00000423035 TICAM2Q86XR7 235 aa5.56□□□□□ -1.52
PGAP1-206ENST00000423035 NRDCO43847 1150 aa5.56□□□□□ -1.52
PGAP1-206ENST00000423035 GRIN2AQ12879 1464 aa5.56□□□□□ -1.52
PGAP1-206ENST00000423035 FAM160A1Q05DH4 1040 aa5.55□□□□□ -1.52
PGAP1-206ENST00000423035 LMOD3Q0VAK6 560 aa5.55□□□□□ -1.52
PGAP1-206ENST00000423035 ANKRD62A6NC57 917 aa5.55□□□□□ -1.52
PGAP1-206ENST00000423035 CCDC34Q96HJ3 373 aa5.55□□□□□ -1.52
PGAP1-206ENST00000423035 BRD3Q15059 726 aa5.54□□□□□ -1.52
PGAP1-206ENST00000423035 PRG4Q92954 1404 aaPredicted RBP5.54□□□□□ -1.52
PGAP1-206ENST00000423035 KDM4FA0A1W2PPD8 638 aa5.54□□□□□ -1.52
PGAP1-206ENST00000423035 BTN2A1Q7KYR7 527 aa5.54□□□□□ -1.52
PGAP1-206ENST00000423035 PRDM10Q9NQV6 1147 aa5.54□□□□□ -1.52
PGAP1-206ENST00000423035 CSB-PGBD3P0DP91 1061 aa5.54□□□□□ -1.52
PGAP1-206ENST00000423035 ENOX2Q16206 610 aaKnown RBP5.54□□□□□ -1.52
PGAP1-206ENST00000423035 DNAI2Q9GZS0 605 aa5.54□□□□□ -1.52
PGAP1-206ENST00000423035 GOLGA6L4A6NEF3 574 aa5.53□□□□□ -1.52
PGAP1-206ENST00000423035 BIN2Q9UBW5 565 aaPredicted RBP5.53□□□□□ -1.52
PGAP1-206ENST00000423035 SYNJ1O43426 1573 aa5.53□□□□□ -1.52
PGAP1-206ENST00000423035 NPM1P06748 294 aaKnown RBP eCLIP5.53□□□□□ -1.52
PGAP1-206ENST00000423035 DZIP1Q86YF9 867 aaKnown RBP5.53□□□□□ -1.52
PGAP1-206ENST00000423035 HSCBQ8IWL3 235 aa5.53□□□□□ -1.52
PGAP1-206ENST00000423035 HTATSF1O43719 755 aaKnown RBP5.53□□□□□ -1.52
PGAP1-206ENST00000423035 CNKSR2Q8WXI2 1034 aa5.53□□□□□ -1.52
PGAP1-206ENST00000423035 ANKRD13AQ8IZ07 590 aa5.53□□□□□ -1.52
PGAP1-206ENST00000423035 MTMR7Q9Y216 660 aa5.53□□□□□ -1.52
PGAP1-206ENST00000423035 WRNQ14191 1432 aaPredicted RBP eCLIP5.52□□□□□ -1.53
PGAP1-206ENST00000423035 FHAD1B1AJZ9 1412 aa5.52□□□□□ -1.53
PGAP1-206ENST00000423035 KDM4AO75164 1064 aa5.52□□□□□ -1.53
PGAP1-206ENST00000423035 ILDR1Q86SU0 546 aaPredicted RBP5.52□□□□□ -1.53
PGAP1-206ENST00000423035 DDRGK1Q96HY6 314 aa5.52□□□□□ -1.53
PGAP1-206ENST00000423035 CEP170Q5SW79 1584 aa5.52□□□□□ -1.53
PGAP1-206ENST00000423035 PUS7Q96PZ0 661 aaKnown RBP5.52□□□□□ -1.53
PGAP1-206ENST00000423035 TSPY4P0CV99 314 aa5.52□□□□□ -1.53
PGAP1-206ENST00000423035 TSPY10P0CW01 314 aa5.52□□□□□ -1.53
PGAP1-206ENST00000423035 FAM69CQ0P6D2 419 aa5.52□□□□□ -1.53
PGAP1-206ENST00000423035 R3HCC1Q9Y3T6 440 aaKnown RBP5.51□□□□□ -1.53
PGAP1-206ENST00000423035 ZRSR2Q15696 482 aaKnown RBP5.51□□□□□ -1.53
PGAP1-206ENST00000423035 MFAP1P55081 439 aaKnown RBP5.51□□□□□ -1.53
PGAP1-206ENST00000423035 TTLL12Q14166 644 aaPredicted RBP5.51□□□□□ -1.53
PGAP1-206ENST00000423035 JPH4Q96JJ6 628 aa5.51□□□□□ -1.53
PGAP1-206ENST00000423035 TMCO5BA8MYB1 307 aa5.5□□□□□ -1.53
PGAP1-206ENST00000423035 PPM1FP49593 454 aaPredicted RBP5.5□□□□□ -1.53
PGAP1-206ENST00000423035 TSPYL1Q9H0U9 437 aa5.5□□□□□ -1.53
PGAP1-206ENST00000423035 ABCC10Q5T3U5 1492 aa5.5□□□□□ -1.53
PGAP1-206ENST00000423035 VASPP50552 380 aaPredicted RBP5.5□□□□□ -1.53
PGAP1-206ENST00000423035 ARID4AP29374 1257 aaPredicted RBP5.5□□□□□ -1.53
PGAP1-206ENST00000423035 COL17A1Q9UMD9 1497 aaPredicted RBP5.5□□□□□ -1.53
PGAP1-206ENST00000423035 STK25O00506 426 aa5.49□□□□□ -1.53
PGAP1-206ENST00000423035 PLIN1O60240 522 aa5.49□□□□□ -1.53
PGAP1-206ENST00000423035 CNPY4Q8N129 248 aa5.49□□□□□ -1.53
PGAP1-206ENST00000423035 MRVI1Q9Y6F6 885 aa5.49□□□□□ -1.53
PGAP1-206ENST00000423035 MAP7D2Q96T17 732 aa5.49□□□□□ -1.53
PGAP1-206ENST00000423035 RBM19Q9Y4C8 960 aaKnown RBP5.49□□□□□ -1.53
PGAP1-206ENST00000423035 CEP89Q96ST8 783 aa5.49□□□□□ -1.53
PGAP1-206ENST00000423035 SOX12O15370 315 aa5.49□□□□□ -1.53
PGAP1-206ENST00000423035 TMC1Q8TDI8 760 aa5.49□□□□□ -1.53
PGAP1-206ENST00000423035 SPOCK2Q92563 424 aa5.49□□□□□ -1.53
PGAP1-206ENST00000423035 WDHD1O75717 1129 aaPredicted RBP5.48□□□□□ -1.53
PGAP1-206ENST00000423035 HSP90AB4PQ58FF6 505 aa5.48□□□□□ -1.53
PGAP1-206ENST00000423035 ZNF777Q9ULD5 760 aaPredicted RBP5.48□□□□□ -1.53
PGAP1-206ENST00000423035 RFX1P22670 979 aa5.48□□□□□ -1.53
PGAP1-206ENST00000423035 GPS2Q13227 327 aa5.48□□□□□ -1.53
PGAP1-206ENST00000423035 IGF1RP08069 1367 aa5.48□□□□□ -1.53
PGAP1-206ENST00000423035 IRX3P78415 501 aaPredicted RBP5.48□□□□□ -1.53
PGAP1-206ENST00000423035 SETSIPP0DME0 302 aa5.48□□□□□ -1.53
PGAP1-206ENST00000423035 MCCP23508 829 aa5.48□□□□□ -1.53
PGAP1-206ENST00000423035 KDM2AQ9Y2K7 1162 aa5.48□□□□□ -1.53
PGAP1-206ENST00000423035 TRIM34Q9BYJ4 488 aa5.47□□□□□ -1.53
PGAP1-206ENST00000423035 TCHPQ9BT92 498 aa5.47□□□□□ -1.53
PGAP1-206ENST00000423035 AAMPQ13685 434 aa5.47□□□□□ -1.53
PGAP1-206ENST00000423035 CCDC27Q2M243 656 aa5.47□□□□□ -1.53
PGAP1-206ENST00000423035 ATP6V1E2Q96A05 226 aa5.47□□□□□ -1.53
PGAP1-206ENST00000423035 CREBRFQ8IUR6 639 aa5.47□□□□□ -1.53
PGAP1-206ENST00000423035 RASSF8Q8NHQ8 419 aa5.47□□□□□ -1.53
PGAP1-206ENST00000423035 ZFP91Q96JP5 570 aaPredicted RBP5.47□□□□□ -1.53
PGAP1-206ENST00000423035 SLKQ9H2G2 1235 aaPredicted RBP5.47□□□□□ -1.53
PGAP1-206ENST00000423035 SUDS3Q9H7L9 328 aaPredicted RBP5.47□□□□□ -1.53
PGAP1-206ENST00000423035 hCG_2014768A0A024R1R8 64 aa5.47□□□□□ -1.53
PGAP1-206ENST00000423035 DYDC1Q8WWB3 177 aa5.47□□□□□ -1.53
PGAP1-206ENST00000423035 RYDENQ9NUL5 291 aaKnown RBP5.47□□□□□ -1.53
PGAP1-206ENST00000423035 SPDYE4A6NLX3 237 aa5.46□□□□□ -1.53
PGAP1-206ENST00000423035 PES1O00541 588 aaKnown RBP5.46□□□□□ -1.53
PGAP1-206ENST00000423035 SMARCA5O60264 1052 aaPredicted RBP5.46□□□□□ -1.53
PGAP1-206ENST00000423035 TRIM29Q14134 588 aa5.46□□□□□ -1.53
PGAP1-206ENST00000423035 LCA5Q86VQ0 697 aa5.46□□□□□ -1.53
PGAP1-206ENST00000423035 ZHX3Q9H4I2 956 aa5.46□□□□□ -1.54
PGAP1-206ENST00000423035 ADAMTS12P58397 1594 aa5.46□□□□□ -1.54
PGAP1-206ENST00000423035 KAT6AQ92794 2004 aa5.46□□□□□ -1.54
PGAP1-206ENST00000423035 CT47B1P0C2W7 299 aaPredicted RBP5.46□□□□□ -1.54
PGAP1-206ENST00000423035 ABCA5Q8WWZ7 1642 aa5.46□□□□□ -1.54
PGAP1-206ENST00000423035 CCDC181Q5TID7 509 aa5.46□□□□□ -1.54
PGAP1-206ENST00000423035 CCDC82Q8N4S0 544 aa5.46□□□□□ -1.54
PGAP1-206ENST00000423035 FAM177A1Q8N128 213 aaPredicted RBP5.46□□□□□ -1.54
PGAP1-206ENST00000423035 TSC1Q92574 1164 aa5.45□□□□□ -1.54
PGAP1-206ENST00000423035 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.45□□□□□ -1.54
PGAP1-206ENST00000423035 RALBP1Q15311 655 aa5.45□□□□□ -1.54
PGAP1-206ENST00000423035 ZRSR1Q15695 479 aaKnown RBP5.45□□□□□ -1.54
PGAP1-206ENST00000423035 USP8P40818 1118 aa5.45□□□□□ -1.54
PGAP1-206ENST00000423035 WDR97A6NE52 1622 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms