RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 USP54Q70EL1 1684 aa4.49□□□□□ -1.69
UBE2W-202ENST00000422906 TIAM1Q13009 1591 aa4.49□□□□□ -1.69
UBE2W-202ENST00000422906 PEAK1Q9H792 1746 aa4.49□□□□□ -1.69
UBE2W-202ENST00000422906 LMTK2Q8IWU2 1503 aa4.48□□□□□ -1.69
UBE2W-202ENST00000422906 KIF1AQ12756 1690 aa4.48□□□□□ -1.69
UBE2W-202ENST00000422906 KNDC1Q76NI1 1749 aa4.48□□□□□ -1.69
UBE2W-202ENST00000422906 BCL9LQ86UU0 1499 aa4.48□□□□□ -1.69
UBE2W-202ENST00000422906 NUP188Q5SRE5 1749 aa4.48□□□□□ -1.69
UBE2W-202ENST00000422906 CDK13Q14004 1512 aaKnown RBP4.47□□□□□ -1.69
UBE2W-202ENST00000422906 NCOA2Q15596 1464 aa4.47□□□□□ -1.69
UBE2W-202ENST00000422906 YEATS2Q9ULM3 1422 aa4.47□□□□□ -1.69
UBE2W-202ENST00000422906 FANCAO15360 1455 aa4.47□□□□□ -1.69
UBE2W-202ENST00000422906 POTEHQ6S545 545 aa4.47□□□□□ -1.69
UBE2W-202ENST00000422906 PTPRKQ15262 1439 aa4.46□□□□□ -1.69
UBE2W-202ENST00000422906 C9orf84Q5VXU9 1444 aa4.46□□□□□ -1.69
UBE2W-202ENST00000422906 TRHP20396 242 aaPredicted RBP4.46□□□□□ -1.7
UBE2W-202ENST00000422906 GCC2Q8IWJ2 1684 aa4.46□□□□□ -1.7
UBE2W-202ENST00000422906 ATP7AQ04656 1500 aa4.45□□□□□ -1.7
UBE2W-202ENST00000422906 THSD7AQ9UPZ6 1657 aa4.45□□□□□ -1.7
UBE2W-202ENST00000422906 SLC34A2O95436 690 aa4.44□□□□□ -1.7
UBE2W-202ENST00000422906 ATP10AO60312 1499 aa4.44□□□□□ -1.7
UBE2W-202ENST00000422906 MBD5Q9P267 1494 aa4.44□□□□□ -1.7
UBE2W-202ENST00000422906 LRRC7Q96NW7 1537 aa4.44□□□□□ -1.7
UBE2W-202ENST00000422906 TRPM1Q7Z4N2 1603 aa4.43□□□□□ -1.7
UBE2W-202ENST00000422906 TRPM3Q9HCF6 1732 aaPredicted RBP4.43□□□□□ -1.7
UBE2W-202ENST00000422906 KIAA1551Q9HCM1 1747 aa4.43□□□□□ -1.7
UBE2W-202ENST00000422906 NWD2Q9ULI1 1742 aa4.43□□□□□ -1.7
UBE2W-202ENST00000422906 PLCH2O75038 1416 aa4.42□□□□□ -1.7
UBE2W-202ENST00000422906 PAPPAQ13219 1627 aa4.42□□□□□ -1.7
UBE2W-202ENST00000422906 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.42□□□□□ -1.7
UBE2W-202ENST00000422906 PLCH1Q4KWH8 1693 aa4.42□□□□□ -1.7
UBE2W-202ENST00000422906 PHLPP1O60346 1717 aa4.42□□□□□ -1.7
UBE2W-202ENST00000422906 GOLGA3Q08378 1498 aa4.42□□□□□ -1.7
UBE2W-202ENST00000422906 SBF2Q86WG5 1849 aa4.41□□□□□ -1.7
UBE2W-202ENST00000422906 JPH4Q96JJ6 628 aa4.4□□□□□ -1.7
UBE2W-202ENST00000422906 ABCC3O15438 1527 aa4.4□□□□□ -1.71
UBE2W-202ENST00000422906 CERKQ8TCT0 537 aa4.4□□□□□ -1.71
UBE2W-202ENST00000422906 A2ML1A8K2U0 1454 aa4.4□□□□□ -1.71
UBE2W-202ENST00000422906 ADGRB3O60242 1522 aa4.4□□□□□ -1.71
UBE2W-202ENST00000422906 RNF216Q9NWF9 866 aaPredicted RBP4.4□□□□□ -1.71
UBE2W-202ENST00000422906 LAMB1P07942 1786 aa4.39□□□□□ -1.71
UBE2W-202ENST00000422906 RGS17Q9UGC6 210 aaPredicted RBP4.39□□□□□ -1.71
UBE2W-202ENST00000422906 PZPP20742 1482 aa4.39□□□□□ -1.71
UBE2W-202ENST00000422906 TUBGCP6Q96RT7 1819 aa4.38□□□□□ -1.71
UBE2W-202ENST00000422906 ALS2Q96Q42 1657 aa4.38□□□□□ -1.71
UBE2W-202ENST00000422906 PTPRGP23470 1445 aa4.38□□□□□ -1.71
UBE2W-202ENST00000422906 AKNAQ7Z591 1439 aa4.38□□□□□ -1.71
UBE2W-202ENST00000422906 SHANK2Q9UPX8 1470 aa4.37□□□□□ -1.71
UBE2W-202ENST00000422906 TOPAZ1Q8N9V7 1692 aa4.37□□□□□ -1.71
UBE2W-202ENST00000422906 RGPD1P0DJD0 1748 aa4.37□□□□□ -1.71
UBE2W-202ENST00000422906 SETBP1Q9Y6X0 1596 aa4.37□□□□□ -1.71
UBE2W-202ENST00000422906 SCAF11Q99590 1463 aaKnown RBP4.36□□□□□ -1.71
UBE2W-202ENST00000422906 KIF27Q86VH2 1401 aa4.36□□□□□ -1.71
UBE2W-202ENST00000422906 DENND4BO75064 1496 aaPredicted RBP4.35□□□□□ -1.71
UBE2W-202ENST00000422906 PIAS4Q8N2W9 510 aaPredicted RBP4.35□□□□□ -1.71
UBE2W-202ENST00000422906 PLEKHH2Q8IVE3 1493 aa4.34□□□□□ -1.71
UBE2W-202ENST00000422906 SHANK3Q9BYB0 1731 aa4.34□□□□□ -1.71
UBE2W-202ENST00000422906 E9PCH4 1651 aa4.34□□□□□ -1.71
UBE2W-202ENST00000422906 TRAPPC8Q9Y2L5 1435 aa4.33□□□□□ -1.72
UBE2W-202ENST00000422906 PPLO60437 1756 aa4.33□□□□□ -1.72
UBE2W-202ENST00000422906 KIF13BQ9NQT8 1826 aa4.33□□□□□ -1.72
UBE2W-202ENST00000422906 CICQ96RK0 1608 aaPredicted RBP4.33□□□□□ -1.72
UBE2W-202ENST00000422906 ARHGAP31Q2M1Z3 1444 aa4.33□□□□□ -1.72
UBE2W-202ENST00000422906 FGD6Q6ZV73 1430 aa4.33□□□□□ -1.72
UBE2W-202ENST00000422906 KIAA1107Q9UPP5 1409 aa4.33□□□□□ -1.72
UBE2W-202ENST00000422906 GLI3P10071 1580 aa4.32□□□□□ -1.72
UBE2W-202ENST00000422906 CARMIL2Q6F5E8 1435 aa4.32□□□□□ -1.72
UBE2W-202ENST00000422906 CNTLNQ9NXG0 1405 aa4.32□□□□□ -1.72
UBE2W-202ENST00000422906 RTEL1-TNFRSF6BF6WH68 1400 aa4.32□□□□□ -1.72
UBE2W-202ENST00000422906 ZFYVE9O95405 1425 aa4.32□□□□□ -1.72
UBE2W-202ENST00000422906 NKTRP30414 1462 aaKnown RBP4.32□□□□□ -1.72
UBE2W-202ENST00000422906 ARHGAP35Q9NRY4 1499 aa4.32□□□□□ -1.72
UBE2W-202ENST00000422906 LMO7Q8WWI1 1683 aa4.31□□□□□ -1.72
UBE2W-202ENST00000422906 FAM69CQ0P6D2 419 aa4.31□□□□□ -1.72
UBE2W-202ENST00000422906 FMN2Q9NZ56 1722 aa4.31□□□□□ -1.72
UBE2W-202ENST00000422906 PARP4Q9UKK3 1724 aaKnown RBP4.31□□□□□ -1.72
UBE2W-202ENST00000422906 BRCA1P38398 1863 aaKnown RBP4.31□□□□□ -1.72
UBE2W-202ENST00000422906 CARMIL1Q5VZK9 1371 aa4.31□□□□□ -1.72
UBE2W-202ENST00000422906 NEXMIFQ5QGS0 1516 aa4.3□□□□□ -1.72
UBE2W-202ENST00000422906 SYCP2Q9BX26 1530 aa4.3□□□□□ -1.72
UBE2W-202ENST00000422906 IGSF5Q9NSI5 407 aa4.3□□□□□ -1.72
UBE2W-202ENST00000422906 NLRP1Q9C000 1473 aa4.3□□□□□ -1.72
UBE2W-202ENST00000422906 MST1RQ04912 1400 aa4.3□□□□□ -1.72
UBE2W-202ENST00000422906 ADGRB2O60241 1585 aa4.3□□□□□ -1.72
UBE2W-202ENST00000422906 DUOX2Q9NRD8 1548 aa4.29□□□□□ -1.72
UBE2W-202ENST00000422906 PTPRUQ92729 1446 aa4.29□□□□□ -1.72
UBE2W-202ENST00000422906 PHRF1Q9P1Y6 1649 aaKnown RBP4.29□□□□□ -1.72
UBE2W-202ENST00000422906 COL18A1P39060 1754 aa4.29□□□□□ -1.72
UBE2W-202ENST00000422906 CHMP7Q8WUX9 453 aaPredicted RBP4.28□□□□□ -1.72
UBE2W-202ENST00000422906 CNKSR2Q8WXI2 1034 aa4.28□□□□□ -1.72
UBE2W-202ENST00000422906 THSD7BQ9C0I4 1608 aa4.28□□□□□ -1.72
UBE2W-202ENST00000422906 KIAA1210Q9ULL0 1709 aa4.27□□□□□ -1.73
UBE2W-202ENST00000422906 FAM135BQ49AJ0 1406 aa4.27□□□□□ -1.73
UBE2W-202ENST00000422906 NCOA3Q9Y6Q9 1424 aa4.27□□□□□ -1.73
UBE2W-202ENST00000422906 ERVK-7P63135 1459 aa4.27□□□□□ -1.73
UBE2W-202ENST00000422906 DCAF8L2P0C7V8 631 aa4.27□□□□□ -1.73
UBE2W-202ENST00000422906 LRRC9Q6ZRR7 1453 aa4.26□□□□□ -1.73
UBE2W-202ENST00000422906 FYCO1Q9BQS8 1478 aa4.26□□□□□ -1.73
UBE2W-202ENST00000422906 CAMTA1Q9Y6Y1 1673 aa4.26□□□□□ -1.73
UBE2W-202ENST00000422906 NRKQ7Z2Y5 1582 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms