RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 DHX29Q7Z478 1369 aaKnown RBP26.91■■□□□ 1.9
RBFOX1-204ENST00000422070 DIP2BQ9P265 1576 aa26.9■■□□□ 1.9
RBFOX1-204ENST00000422070 HECW2Q9P2P5 1572 aa26.9■■□□□ 1.9
RBFOX1-204ENST00000422070 VWDEQ8N2E2 1590 aa26.89■■□□□ 1.9
RBFOX1-204ENST00000422070 PRDM15P57071 1507 aaPredicted RBP26.87■■□□□ 1.89
RBFOX1-204ENST00000422070 PLA2R1Q13018 1463 aa26.83■■□□□ 1.88
RBFOX1-204ENST00000422070 BCORL1Q5H9F3 1711 aa26.83■■□□□ 1.88
RBFOX1-204ENST00000422070 MROH1Q8NDA8 1641 aa26.82■■□□□ 1.88
RBFOX1-204ENST00000422070 TET3O43151 1660 aa26.82■■□□□ 1.88
RBFOX1-204ENST00000422070 CCDC144AA2RUR9 1427 aa26.81■■□□□ 1.88
RBFOX1-204ENST00000422070 A2MP01023 1474 aa26.81■■□□□ 1.88
RBFOX1-204ENST00000422070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.81■■□□□ 1.88
RBFOX1-204ENST00000422070 UHRF1BP1Q6BDS2 1440 aa26.81■■□□□ 1.88
RBFOX1-204ENST00000422070 RNF17Q9BXT8 1623 aaKnown RBP26.8■■□□□ 1.88
RBFOX1-204ENST00000422070 RICTORQ6R327 1708 aa26.8■■□□□ 1.88
RBFOX1-204ENST00000422070 KANK1Q14678 1352 aa26.78■■□□□ 1.88
RBFOX1-204ENST00000422070 E9PCH4 1651 aa26.77■■□□□ 1.88
RBFOX1-204ENST00000422070 FRMPD1Q5SYB0 1578 aa26.77■■□□□ 1.88
RBFOX1-204ENST00000422070 ABCA6Q8N139 1617 aa26.76■■□□□ 1.87
RBFOX1-204ENST00000422070 NBPF8Q3BBV2 869 aa26.75■■□□□ 1.87
RBFOX1-204ENST00000422070 LMTK2Q8IWU2 1503 aa26.75■■□□□ 1.87
RBFOX1-204ENST00000422070 MYT1LQ9UL68 1186 aa26.74■■□□□ 1.87
RBFOX1-204ENST00000422070 TRPM2O94759 1503 aa26.73■■□□□ 1.87
RBFOX1-204ENST00000422070 PTPRTO14522 1441 aa26.73■■□□□ 1.87
RBFOX1-204ENST00000422070 PPRC1Q5VV67 1664 aaKnown RBP26.72■■□□□ 1.87
RBFOX1-204ENST00000422070 ZMYM4Q5VZL5 1548 aa26.72■■□□□ 1.87
RBFOX1-204ENST00000422070 KIF3BO15066 747 aa26.71■■□□□ 1.87
RBFOX1-204ENST00000422070 FAM69CQ0P6D2 419 aa26.71■■□□□ 1.87
RBFOX1-204ENST00000422070 DIP2CQ9Y2E4 1556 aa26.71■■□□□ 1.87
RBFOX1-204ENST00000422070 SPHKAPQ2M3C7 1700 aa26.7■■□□□ 1.86
RBFOX1-204ENST00000422070 EIF4G2P78344 907 aaKnown RBP eCLIP26.7■■□□□ 1.86
RBFOX1-204ENST00000422070 RALGAPBQ86X10 1494 aa26.69■■□□□ 1.86
RBFOX1-204ENST00000422070 MIER1Q8N108 512 aa26.69■■□□□ 1.86
RBFOX1-204ENST00000422070 EFCAB6Q5THR3 1501 aa26.68■■□□□ 1.86
RBFOX1-204ENST00000422070 SPATA31E1Q6ZUB1 1445 aa26.66■■□□□ 1.86
RBFOX1-204ENST00000422070 NEURL4Q96JN8 1562 aa26.64■■□□□ 1.86
RBFOX1-204ENST00000422070 RAPGEF3O95398 923 aa26.63■■□□□ 1.85
RBFOX1-204ENST00000422070 HSPA5P11021 654 aaKnown RBP26.63■■□□□ 1.85
RBFOX1-204ENST00000422070 KIF13AQ9H1H9 1805 aa26.62■■□□□ 1.85
RBFOX1-204ENST00000422070 CEP152O94986 1710 aa26.61■■□□□ 1.85
RBFOX1-204ENST00000422070 HIRIP3Q9BW71 556 aaPredicted RBP26.59■■□□□ 1.85
RBFOX1-204ENST00000422070 PRAG1Q86YV5 1406 aa26.58■■□□□ 1.84
RBFOX1-204ENST00000422070 CLTCL1P53675 1640 aa26.57■■□□□ 1.84
RBFOX1-204ENST00000422070 REREQ9P2R6 1566 aa26.56■■□□□ 1.84
RBFOX1-204ENST00000422070 DCAF11Q8TEB1 546 aa26.56■■□□□ 1.84
RBFOX1-204ENST00000422070 POLR1AO95602 1720 aaPredicted RBP26.56■■□□□ 1.84
RBFOX1-204ENST00000422070 TSPOAP1O95153 1857 aa26.55■■□□□ 1.84
RBFOX1-204ENST00000422070 TRPM1Q7Z4N2 1603 aa26.55■■□□□ 1.84
RBFOX1-204ENST00000422070 ZC3H13Q5T200 1668 aaKnown RBP26.54■■□□□ 1.84
RBFOX1-204ENST00000422070 ABCC3O15438 1527 aa26.54■■□□□ 1.84
RBFOX1-204ENST00000422070 YEATS2Q9ULM3 1422 aa26.53■■□□□ 1.84
RBFOX1-204ENST00000422070 DDX10Q13206 875 aaKnown RBP26.53■■□□□ 1.84
RBFOX1-204ENST00000422070 LAMC1P11047 1609 aa26.52■■□□□ 1.84
RBFOX1-204ENST00000422070 STAC3Q96MF2 364 aa26.52■■□□□ 1.84
RBFOX1-204ENST00000422070 USP47Q96K76 1375 aa26.5■■□□□ 1.83
RBFOX1-204ENST00000422070 GPRASP1Q5JY77 1395 aa26.48■■□□□ 1.83
RBFOX1-204ENST00000422070 ZNF326Q5BKZ1 582 aaKnown RBP26.48■■□□□ 1.83
RBFOX1-204ENST00000422070 WASHC2AQ641Q2 1341 aa26.48■■□□□ 1.83
RBFOX1-204ENST00000422070 CAMSAP1Q5T5Y3 1602 aa26.48■■□□□ 1.83
RBFOX1-204ENST00000422070 NPATQ14207 1427 aa26.47■■□□□ 1.83
RBFOX1-204ENST00000422070 AGLP35573 1532 aa26.46■■□□□ 1.83
RBFOX1-204ENST00000422070 ARHGAP31Q2M1Z3 1444 aa26.45■■□□□ 1.83
RBFOX1-204ENST00000422070 CNTLNQ9NXG0 1405 aa26.45■■□□□ 1.83
RBFOX1-204ENST00000422070 KDM2AQ9Y2K7 1162 aa26.45■■□□□ 1.82
RBFOX1-204ENST00000422070 RGL3Q3MIN7 710 aa26.44■■□□□ 1.82
RBFOX1-204ENST00000422070 CCDC7Q96M83 1385 aa26.44■■□□□ 1.82
RBFOX1-204ENST00000422070 MADDQ8WXG6 1647 aa26.43■■□□□ 1.82
RBFOX1-204ENST00000422070 ROCK2O75116 1388 aaKnown RBP26.43■■□□□ 1.82
RBFOX1-204ENST00000422070 GGT6Q6P531 493 aa26.42■■□□□ 1.82
RBFOX1-204ENST00000422070 KIF1BO60333 1816 aa26.41■■□□□ 1.82
RBFOX1-204ENST00000422070 CARD11Q9BXL7 1154 aa26.41■■□□□ 1.82
RBFOX1-204ENST00000422070 ARID4BQ4LE39 1312 aaPredicted RBP26.41■■□□□ 1.82
RBFOX1-204ENST00000422070 WASHC2CQ9Y4E1 1318 aa26.41■■□□□ 1.82
RBFOX1-204ENST00000422070 ARHGEF40Q8TER5 1519 aa26.39■■□□□ 1.81
RBFOX1-204ENST00000422070 NOS1P29475 1434 aa26.38■■□□□ 1.81
RBFOX1-204ENST00000422070 ADGRB3O60242 1522 aa26.38■■□□□ 1.81
RBFOX1-204ENST00000422070 MYOM2P54296 1465 aa26.38■■□□□ 1.81
RBFOX1-204ENST00000422070 UGGT1Q9NYU2 1555 aa26.37■■□□□ 1.81
RBFOX1-204ENST00000422070 IFT172Q9UG01 1749 aa26.35■■□□□ 1.81
RBFOX1-204ENST00000422070 COL17A1Q9UMD9 1497 aaPredicted RBP26.35■■□□□ 1.81
RBFOX1-204ENST00000422070 KIF7Q2M1P5 1343 aa26.35■■□□□ 1.81
RBFOX1-204ENST00000422070 C11orf95C9JLR9 678 aaPredicted RBP26.34■■□□□ 1.81
RBFOX1-204ENST00000422070 PIK3C2BO00750 1634 aa26.34■■□□□ 1.81
RBFOX1-204ENST00000422070 KIAA1210Q9ULL0 1709 aa26.34■■□□□ 1.81
RBFOX1-204ENST00000422070 PPP6R1Q9UPN7 881 aa26.33■■□□□ 1.81
RBFOX1-204ENST00000422070 SIGLEC1Q9BZZ2 1709 aa26.33■■□□□ 1.8
RBFOX1-204ENST00000422070 MROH2AA6NES4 1674 aa26.32■■□□□ 1.8
RBFOX1-204ENST00000422070 ANP32CO43423 234 aa26.31■■□□□ 1.8
RBFOX1-204ENST00000422070 CENPBP07199 599 aaPredicted RBP26.31■■□□□ 1.8
RBFOX1-204ENST00000422070 SYNMO15061 1565 aa26.29■■□□□ 1.8
RBFOX1-204ENST00000422070 NRXN1Q9ULB1 1477 aa26.29■■□□□ 1.8
RBFOX1-204ENST00000422070 CCER2I3L3R5 266 aa26.28■■□□□ 1.8
RBFOX1-204ENST00000422070 NBPF1Q3BBV0 1214 aa26.25■■□□□ 1.79
RBFOX1-204ENST00000422070 IQGAP1P46940 1657 aa26.25■■□□□ 1.79
RBFOX1-204ENST00000422070 ST20-MTHFSA0A0A6YYL1 179 aa26.24■■□□□ 1.79
RBFOX1-204ENST00000422070 PREX1Q8TCU6 1659 aa26.24■■□□□ 1.79
RBFOX1-204ENST00000422070 PPLO60437 1756 aa26.22■■□□□ 1.79
RBFOX1-204ENST00000422070 RPGRIP1LQ68CZ1 1315 aa26.22■■□□□ 1.79
RBFOX1-204ENST00000422070 SCAF11Q99590 1463 aaKnown RBP26.18■■□□□ 1.78
RBFOX1-204ENST00000422070 SLC52A1Q9NWF4 448 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms